Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq13 226 4e-54 >seq13 Length=360411 Score = 226 bits (250), Expect = 4e-54 Identities = 903/1407 (64%), Gaps = 41/1407 (3%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || || |||| ||||| || |||||||| || ||||||||||||||||| | || ||| Sbjct 46237 TAAATGTTGGATGTGTAAGGTTCAAAGCATTCGTTGTTACCCAAGATTTGAGAAGTAGAG 46178 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTC--CCTAATGCGTT 118299 ||||| ||||| || || | || | || | |||||| | || || ||| || Sbjct 46177 GCTGTTGGCATCGGAGCAACAAGCAAAGAATTTCTGAGACCGTGTTTGGCCAAATT--TT 46120 Query 118300 CCTTGAGAGCGTCCCAGTCGTA-------GTTGAGCTTTGTCTCCCCCTGCCACATATCA 118352 ||| | || |||||||| | | || ||||| | |||| ||| || Sbjct 46119 GCTTCAAAGTATCCCAGTCCCACAACTCGGATG-GCTTTCTGTCCC------ACAAGTCG 46067 Query 118353 AACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACC 118412 |||| | | || | ||||| || || || ||| ||||||||||||| || || || Sbjct 46066 TACTGCAACAATCCCTTTGACGCAGGAGAACCTTCATATGTCTCATATGGACCTTCCTCC 46007 Query 118413 TCCGCCAATTCGG-AGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGC 118471 | || | ||| || | || || | || || ||||| || || || || || || Sbjct 46006 TGAGCAAGCTCGATAGAT-GCTTCCACAGCAGCATGATAAATGGTCTCGAATATCTGAAT 45948 Query 118472 ATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGC 118531 |||| | || || || | ||| || || | | || | | || ||| |||| || Sbjct 45947 GTTCAACTCTTTAGCTTCCTGGGAGTCGAAAGGCAATCTCAAGGACATGAATGCATCAGC 45888 Query 118532 GAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTCCGAGCGGTCT 118590 |||||||| || || || |||| || | | ||||||||| || |||| | || || Sbjct 45887 AAGACCTTGAACTCCAAGAGCAATAGGTCTGTTTCTCATATTGGATCTTCTG-GCTTCCT 45829 Query 118591 CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 118650 | || || |||||||| || || || | || || | ||| | || |||||||| || | Sbjct 45828 CAACAGGGTAAAAATTTCTGTCAATGATTCTGTTCAAGTTTCTAGTAACAACCTTGGTCA 45769 Query 118651 TTTCATGAAGCTTTTCGTAATCAAAACTG---CGAGTCTCTTCATTGACATACTTAGGAA 118707 || || | ||| || | | | | | | || | || || || || | ||| Sbjct 45768 CCTCGTGCAACTTATCAAAGTTGTACCAGGAACTAGATGCATCTTTCTCA-ACGAATGAA 45710 Query 118708 GG----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 || || || || |||| ||||| |||| || || || |||||| | | Sbjct 45709 GGCAAAGCAATGGAGGCCAAGTTACAGACAGCAACTTCTTCTGGGGAAGAGTACTCGACA 45650 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || || |||||||| || || || | |||||||||||||| || | || || Sbjct 45649 ATCTCACAACACAAGTTAGATGATTTGATAATACCCAAGTTCTTTTGGTTAGTTTTCTTG 45590 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 ||||| ||||||||||| | |||| |||| || || ||||| ||||| | | | ||| Sbjct 45589 TTACAAGCATCCTTGTACAACATGAATGGAGTTCCTGTCTCAGTTTGCGCTTCCAAGATA 45530 Query 118884 GCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTT 118943 | | ||| | | ||| || |||| | | || || ||| ||| |||||| Sbjct 45529 GAGTACCAAAGCTTTTGAGCCTTGACGGTGGATCTTCCACGGCCTTCTCTCTCATACTTT 45470 Query 118944 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 119003 ||| | ||||||||||| || || | | || | | || || || | || ||| Sbjct 45469 TCGTACAAAGCTTCAAACTCATCGCCGTAGACATCAGCCAAACCAGGAGCTTCATTTGGA 45410 Query 119004 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 119063 | || | || ||| | ||| | ||||| | ||||||||| | || |||||||| Sbjct 45409 GAAAACAAAGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAACAAATCCGGGATCCAA 45350 Query 119064 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 119123 || || | ||| | ||| | | | |||||| | || || || | | || Sbjct 45349 AGAGCAGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACCGTGGTTCTTTCTAATGTCG 45290 Query 119124 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT------TGACCCC 119177 | ||||| | || || || ||||| || |||| ||| | ||| | || || | Sbjct 45289 ATGAAGTCGAAAATGTCAGCATGCCAAGGCTCCAAGTAAATCGCAAAAGCGCCTGGCCTC 45230 Query 119178 TTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGA 119237 || | | ||| | |||| ||||| | || ||| ||| || ||||| | ||||||| Sbjct 45229 TT--GTTG-CCACCTTGGTCGACATAACGTGCTGTGTTGTTGAAAACACGCACCATTGGA 45173 Query 119238 ATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCG 119297 |||||||| | || || || || || ||| || | | ||||| | | Sbjct 45172 ATGATACCGTTAGAAGTACCGTTAGTACCTGCAATGTAAGCGCCAGTACTTCTGATGTTG 45113 Query 119298 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTG 119357 |||||||||| ||||||||| || || | ||| || ||| ||||| | | | || Sbjct 45112 TGGATGTGCAAACCAATACCACCAGCACTCTTGGAAATTAAAGCGCATGTCTTTAATGTG 45053 Query 119358 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGA 119417 |||| || || ||||| |||||| |||| | || | ||||| || ||||||||| Sbjct 45052 TCGTAAATACCGTCGATGGAGTCATCCTTCATGGCAACAAGGAAACAAGACGACATTTGG 44993 Query 119418 GGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGA 119476 || || || ||||| || ||||| | ||||| | ||| || || || || ||||| Sbjct 44992 GGGCTTGGGGTACCTGCATTGAACAAGGTTGGAGAACCGT-GAGTAAAGTATCTCTGGGA 44934 Query 119477 CATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGAC 119536 |||| | ||| || || | || |||||| | |||||||||||| | || || Sbjct 44933 CATCAAATTGTAAGTTTCGATCACACGTTCAATGTCATTCCCGTGAATACCAACCGCAAC 44874 Query 119537 CCGCATAAACATGTATTGGGGTGTTTC 119563 | ||| | || | || ||| |||| Sbjct 44873 TCTCATGATCAAATGCTGTGGTCTTTC 44847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434790286680