Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq13 358 8e-94
seq1 86.0 7e-12
seq12 82.4 9e-11
>seq13
Length=360411
Score = 358 bits (396), Expect = 8e-94
Identities = 1138/1750 (65%), Gaps = 47/1750 (3%)
Strand=Plus/Plus
Query 104216 GAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGAT 104275
|||| |||||| | || ||||| | || || | |||||||| ||| | ||||||||
Sbjct 44847 GAAAGACCACAGCATTTGATCATGAGAGTTGCGGTTGGTATTCACGGGAATGACATTGAA 44906
Query 104276 TCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAAC 104334
||| | || || ||| | ||||||||| || || || | ||||| | |||||
Sbjct 44907 CGTGTGATCGAAACTTACAATTTGATGTCCCAGAGATACTTT-ACTCACGGTTCTCCAAC 44965
Query 104335 CCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAA 104394
| | |||||||| ||||| ||||| ||||||||||| ||| |||||| | |||| ||
Sbjct 44966 CTTGTTCAATGCAGGTACCCCAAGCCCCCAAATGTCGTCTTGTTTCCTTGTTGCCATGAA 45025
Query 104395 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 104454
||| ||||| ||| ||||||| || | || | | | || || ||| || ||| |
Sbjct 45026 GGATGACTCCATCGACGGTATTTACGACACATTAAAGACATGCGCTTTAATTTCCAAGAG 45085
Query 104455 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 104514
||||| |||||||| |||||||||| | | ||| | | || ||| ||
Sbjct 45086 TGCTGGTGGTATTGGTTTGCACATCCACAACATCAGAAGTACTGGCGCTTACATTGCAGG 45145
Query 104515 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574
|| || ||| || | ||||| ||||||||| | || || || ||| |||||| ||
Sbjct 45146 TACTAACGGTACTTCTAACGGTATCATTCCAATGGTGCGTGTTTTCAACAACACAGCACG 45205
Query 104575 CTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCAT 104630
||||| | |||| | ||| | | || || || | || | || | ||||| |
Sbjct 45206 TTATGTCGACCAAGGT-GGCAACAAGAGGCCAGGCGCTTTTGCGATTTACTTGGAGCCTT 45264
Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGC 104690
|||| || || || | || ||| | || | | ||||| ||| | || ||
Sbjct 45265 GGCATGCTGACATTTTCGACTTCATCGACATTAGAAAGAACCACGGTAAGGAAGAAATTA 45324
Query 104691 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750
| | | ||| | ||| | ||||| ||||| || ||| | |||||||||||||||||
Sbjct 45325 GAGCCAGAGATTTGTTCCCTGCTCTTTGGATCCCGGATTTGTTCATGAAGAGAGTTGAAC 45384
Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810
| | || | ||| || | |||| |||| | | || |||||| | | |||| | |
Sbjct 45385 AAAACGGTGACTGGACTTTGTTTTCTCCAAATGAAGCTCCTGGTTTGGCTGATGTCTACG 45444
Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGG 104870
| || ||||||||||| | ||| |||||| ||| |||||| || | | | || |
Sbjct 45445 GCGATGAGTTTGAAGCTTTGTACGAAAAGTATGAGAGAGAAGGCCGTGGAAGATCCACCG 45504
Query 104871 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930
| ||| | | ||| | |||| | | | ||||| ||||| || || ||||
Sbjct 45505 TCAAGGCTCAAAAGCTTTGGTACTCTATCTTGGAAGCGCAAACTGAGACAGGAACTCCAT 45564
Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990
|||| | ||||| || || |||||| | || | ||| |||||||| |||||| | ||||
Sbjct 45565 TCATGTTGTACAAGGATGCTTGTAACAAGAAAACTAACCAAAAGAACTTGGGTATTATCA 45624
Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050
| || || | ||| || || | || | | | ||| || ||||| |
Sbjct 45625 AATCATCTAACTTGTGTTGTGAGATTGTCGAGTACTCTTCCCCAGAAGAAGTTGCTGTCT 45684
Query 105051 GTAACCTCGCATCAATCGCTCTCCC--CA-------AGTATG-TGGATCCAGAGACAAAG 105100
||||| | || || || ||| | || || || | | || ||| || |
Sbjct 45685 GTAACTTGGCCTCCATTGCTTTGCCTTCATTCGTTGAGAAAGATGCATCTAGTTCCTGGT 45744
Query 105101 ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160
||| | | ||| || | ||||| || || || ||| || | |||| | ||||||
Sbjct 45745 ACA----ACTTTGATAAGTTGCACGAGGTGACCAAGGTTGTTACTAGAAACTTGAACAGA 45800
Query 105161 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220
| ||||| |||||||||||||| |||||| || | | ||| ||||||||| || |
Sbjct 45801 ATCATTGACAGAAATTTTTACCCTGTTGAGGAAGCCAGAAGATCCAATATGAGAAACAGA 45860
Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTG---TCGCCACGC 105276
|| |||| ||| || ||||| ||||| || |||| |||||| || ||| | || |
Sbjct 45861 CCTATTGCTCTTGGAGTTCAAGGTCTTGCTGATGCATTCATGTCCTTGAGATTGC----C 45916
Query 105277 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336
|| || ||| | ||||| || || | || | ||||| |||||||| ||||| ||
Sbjct 45917 TTTCGACTCCCAGGAAGCTAAAGAGTTGAACATTCAGATATTCGAGACCATTTATCATGC 45976
Query 105337 CGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 105396
||| | || || | ||| | || ||| || ||||||||||| || | ||| ||
Sbjct 45977 TGCTGTGGAAGCATCTATCGAGCTTGCTCAGGAGGAAGGTCCATATGAGACATATGAAGG 46036
Query 105397 TTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAG---ACCAAGCT 105453
|||||| || ||| | || || | || | || ||||||| | || || || |
Sbjct 46037 TTCTCCTGCGTCAAAGGGATTGTTGCAGTACGACTTGTGGGACAGAAAGCCATCCGAGTT 46096
Query 105454 TCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 105513
| |||||||| || | ||| || | | | ||||| | || | |
Sbjct 46097 ---GTGGGACTGGGATACTTTGAAGCAAAATTTGGCCAAACACGGTCTCAGAAATTCTTT 46153
Query 105514 CCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 105573
|| | ||||| |||||||||||||| || | |||||||||||||| || ||||||||
Sbjct 46154 GCTTGTTGCTCCGATGCCAACAGCCTCTACTTCTCAAATCTTGGGTAACAACGAATGCTT 46213
Query 105574 TGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 105633
|||||| ||||| | ||||| || |||||| || || || ||||| ||||||
Sbjct 46214 TGAACCTTACACATCCAACATTTACTCCAGAAGAGTGCTTGCCGGCGAGTTCCAGATTGT 46273
Query 105634 CAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG-- 105691
||| || | || | ||| | || | ||| | ||| | ||||||||
Sbjct 46274 TAACCCACACATGTTGAAGGACTTAGTTGACTTAGGTATTTGGAATGACAATATGAAGAA 46333
Query 105692 -GATCTCATGGTGAA-AGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAA 105749
| |||| | || | | || |||||||| | | || | ||| | ||||
Sbjct 46334 CAACATCATTGCCAACAAC----GGATCCATTCAGTCTTTACCAAATGTCCCAGACGAAA 46389
Query 105750 TTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCG 105809
| ||| || || || || ||||||||| |||| || ||||||||||||| |
Sbjct 46390 TCAAGCGTTTATATAAAACCGTGTGGGAAATCTCTCAGAAGCATATCATTGACATGGCTG 46449
Query 105810 CAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCC 105867
| || | | | || ||||||| ||||| ||| |||| || ||| | ||
Sbjct 46450 CCGACAGAGCTGCGTTTATTGATC--AGTCACAGTCGTTGAACATCCACATCAGAGAACC 46507
Query 105868 AACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGG 105927
|| ||| ||| | |||| |||||| | ||| | ||||||||||| | || |||||
Sbjct 46508 TACTATGGGTAAGTTGACTTCCATGCACTTTTACGGATGGAAGAAGGGATTGAAGACGGG 46567
Query 105928 GATGTATTAC 105937
||||| |||
Sbjct 46568 TATGTACTAC 46577
>seq1
Length=1779567
Score = 86.0 bits (94), Expect = 7e-12
Identities = 222/333 (67%), Gaps = 13/333 (4%)
Strand=Plus/Minus
Query 9609 TATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT-- 9666
|||||||||||||||| || ||| | ||||| | ||| ||| || ||||| ||
Sbjct 1280484 TATCAAAACCATCCATTTCAACCAACAACTGGTTCAAAGTAGTTTCACGCTCATCGTTGG 1280425
Query 9667 ---CGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAA 9723
|||| |||| | | | | | ||||| || | |||||||||||| || | ||
Sbjct 1280424 CTCCGCTTGCATTTCCCTTGGATCTC--TGCTTACCAATGGCATCAATCTCGTCCACAAA 1280367
Query 9724 GACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCC 9783
|| ||| |||| ||||| | || || || | || || |||||| ||| ||
Sbjct 1280366 CACAATGGATGGAGCGTTTTCTCTGGCAGTTTTGAACAAGTCACGCACACGCGAGGCACC 1280307
Query 9784 CACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGAT-GAAGGGGACATTA 9841
||||||||||||||| || || || | | | || ||| | || |||||| || |
Sbjct 1280306 CACACCAACAAACATTTCAACGAACTCAGAACCAGAGACA--GAATAGAAGGGAACTCCA 1280249
Query 9842 GATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGG 9901
| ||| || || ||||| ||| | | ||| ||||| ||||| || ||| | |
Sbjct 1280248 GCTTCTCCTGCGGTGGCTTTGGCCAACAAAGTTTTACCGGTACCGGGAGGACCAGACAAA 1280189
Query 9902 AGGGCACCTCGTGGAATCTTGGCGCC--ACTTC 9932
| ||||| || |||||||| || || |||||
Sbjct 1280188 ATAGCACCACGGGGAATCTTAGCACCCAACTTC 1280156
>seq12
Length=420913
Score = 82.4 bits (90), Expect = 9e-11
Identities = 115/160 (72%), Gaps = 1/160 (1%)
Strand=Plus/Plus
Query 154115 GTTGCGCCACGATCTGGTCTCGCTGTGAAACATGGTATCCAAGTTGGTGCGGGTGTTGTT 154174
|| || ||| |||| |||||||| || ||||| || || | ||||| |||||| ||
Sbjct 286623 GTAGCACCAAGATCGGGTCTCGCAGTCAAACACGGAATTTCAACAGGTGCCGGTGTTATT 286682
Query 154175 GATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTTTTCAATCACGGAGACAAAGACTTT 154234
||| | ||||||| ||| || || || | ||||||||||| || | | || ||||||
Sbjct 286683 GATGCAGACTACAGGGGCGAGGTGAAGATTGTTCTTTTCAACCATTCAAAGAAGGACTTT 286742
Query 154235 GAGGTAAAGAGGGGTGAGCGCATCGCACAACTTGTTCTTG 154274
||| | || | || || | || |||||| ||| | |||
Sbjct 286743 GAGATCAAAACTGGAGACAGAATTGCACAA-TTGGTGTTG 286781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260413589720
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