Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq13 358 8e-94 seq1 86.0 7e-12 seq12 82.4 9e-11 >seq13 Length=360411 Score = 358 bits (396), Expect = 8e-94 Identities = 1138/1750 (65%), Gaps = 47/1750 (3%) Strand=Plus/Plus Query 104216 GAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGAT 104275 |||| |||||| | || ||||| | || || | |||||||| ||| | |||||||| Sbjct 44847 GAAAGACCACAGCATTTGATCATGAGAGTTGCGGTTGGTATTCACGGGAATGACATTGAA 44906 Query 104276 TCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAAC 104334 ||| | || || ||| | ||||||||| || || || | ||||| | ||||| Sbjct 44907 CGTGTGATCGAAACTTACAATTTGATGTCCCAGAGATACTTT-ACTCACGGTTCTCCAAC 44965 Query 104335 CCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAA 104394 | | |||||||| ||||| ||||| ||||||||||| ||| |||||| | |||| || Sbjct 44966 CTTGTTCAATGCAGGTACCCCAAGCCCCCAAATGTCGTCTTGTTTCCTTGTTGCCATGAA 45025 Query 104395 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 104454 ||| ||||| ||| ||||||| || | || | | | || || ||| || ||| | Sbjct 45026 GGATGACTCCATCGACGGTATTTACGACACATTAAAGACATGCGCTTTAATTTCCAAGAG 45085 Query 104455 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 104514 ||||| |||||||| |||||||||| | | ||| | | || ||| || Sbjct 45086 TGCTGGTGGTATTGGTTTGCACATCCACAACATCAGAAGTACTGGCGCTTACATTGCAGG 45145 Query 104515 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574 || || ||| || | ||||| ||||||||| | || || || ||| |||||| || Sbjct 45146 TACTAACGGTACTTCTAACGGTATCATTCCAATGGTGCGTGTTTTCAACAACACAGCACG 45205 Query 104575 CTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCAT 104630 ||||| | |||| | ||| | | || || || | || | || | ||||| | Sbjct 45206 TTATGTCGACCAAGGT-GGCAACAAGAGGCCAGGCGCTTTTGCGATTTACTTGGAGCCTT 45264 Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGC 104690 |||| || || || | || ||| | || | | ||||| ||| | || || Sbjct 45265 GGCATGCTGACATTTTCGACTTCATCGACATTAGAAAGAACCACGGTAAGGAAGAAATTA 45324 Query 104691 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 | | | ||| | ||| | ||||| ||||| || ||| | ||||||||||||||||| Sbjct 45325 GAGCCAGAGATTTGTTCCCTGCTCTTTGGATCCCGGATTTGTTCATGAAGAGAGTTGAAC 45384 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810 | | || | ||| || | |||| |||| | | || |||||| | | |||| | | Sbjct 45385 AAAACGGTGACTGGACTTTGTTTTCTCCAAATGAAGCTCCTGGTTTGGCTGATGTCTACG 45444 Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGG 104870 | || ||||||||||| | ||| |||||| ||| |||||| || | | | || | Sbjct 45445 GCGATGAGTTTGAAGCTTTGTACGAAAAGTATGAGAGAGAAGGCCGTGGAAGATCCACCG 45504 Query 104871 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 | ||| | | ||| | |||| | | | ||||| ||||| || || |||| Sbjct 45505 TCAAGGCTCAAAAGCTTTGGTACTCTATCTTGGAAGCGCAAACTGAGACAGGAACTCCAT 45564 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 |||| | ||||| || || |||||| | || | ||| |||||||| |||||| | |||| Sbjct 45565 TCATGTTGTACAAGGATGCTTGTAACAAGAAAACTAACCAAAAGAACTTGGGTATTATCA 45624 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 | || || | ||| || || | || | | | ||| || ||||| | Sbjct 45625 AATCATCTAACTTGTGTTGTGAGATTGTCGAGTACTCTTCCCCAGAAGAAGTTGCTGTCT 45684 Query 105051 GTAACCTCGCATCAATCGCTCTCCC--CA-------AGTATG-TGGATCCAGAGACAAAG 105100 ||||| | || || || ||| | || || || | | || ||| || | Sbjct 45685 GTAACTTGGCCTCCATTGCTTTGCCTTCATTCGTTGAGAAAGATGCATCTAGTTCCTGGT 45744 Query 105101 ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160 ||| | | ||| || | ||||| || || || ||| || | |||| | |||||| Sbjct 45745 ACA----ACTTTGATAAGTTGCACGAGGTGACCAAGGTTGTTACTAGAAACTTGAACAGA 45800 Query 105161 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220 | ||||| |||||||||||||| |||||| || | | ||| ||||||||| || | Sbjct 45801 ATCATTGACAGAAATTTTTACCCTGTTGAGGAAGCCAGAAGATCCAATATGAGAAACAGA 45860 Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTG---TCGCCACGC 105276 || |||| ||| || ||||| ||||| || |||| |||||| || ||| | || | Sbjct 45861 CCTATTGCTCTTGGAGTTCAAGGTCTTGCTGATGCATTCATGTCCTTGAGATTGC----C 45916 Query 105277 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336 || || ||| | ||||| || || | || | ||||| |||||||| ||||| || Sbjct 45917 TTTCGACTCCCAGGAAGCTAAAGAGTTGAACATTCAGATATTCGAGACCATTTATCATGC 45976 Query 105337 CGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 105396 ||| | || || | ||| | || ||| || ||||||||||| || | ||| || Sbjct 45977 TGCTGTGGAAGCATCTATCGAGCTTGCTCAGGAGGAAGGTCCATATGAGACATATGAAGG 46036 Query 105397 TTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAG---ACCAAGCT 105453 |||||| || ||| | || || | || | || ||||||| | || || || | Sbjct 46037 TTCTCCTGCGTCAAAGGGATTGTTGCAGTACGACTTGTGGGACAGAAAGCCATCCGAGTT 46096 Query 105454 TCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 105513 | |||||||| || | ||| || | | | ||||| | || | | Sbjct 46097 ---GTGGGACTGGGATACTTTGAAGCAAAATTTGGCCAAACACGGTCTCAGAAATTCTTT 46153 Query 105514 CCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 105573 || | ||||| |||||||||||||| || | |||||||||||||| || |||||||| Sbjct 46154 GCTTGTTGCTCCGATGCCAACAGCCTCTACTTCTCAAATCTTGGGTAACAACGAATGCTT 46213 Query 105574 TGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 105633 |||||| ||||| | ||||| || |||||| || || || ||||| |||||| Sbjct 46214 TGAACCTTACACATCCAACATTTACTCCAGAAGAGTGCTTGCCGGCGAGTTCCAGATTGT 46273 Query 105634 CAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG-- 105691 ||| || | || | ||| | || | ||| | ||| | |||||||| Sbjct 46274 TAACCCACACATGTTGAAGGACTTAGTTGACTTAGGTATTTGGAATGACAATATGAAGAA 46333 Query 105692 -GATCTCATGGTGAA-AGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAA 105749 | |||| | || | | || |||||||| | | || | ||| | |||| Sbjct 46334 CAACATCATTGCCAACAAC----GGATCCATTCAGTCTTTACCAAATGTCCCAGACGAAA 46389 Query 105750 TTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCG 105809 | ||| || || || || ||||||||| |||| || ||||||||||||| | Sbjct 46390 TCAAGCGTTTATATAAAACCGTGTGGGAAATCTCTCAGAAGCATATCATTGACATGGCTG 46449 Query 105810 CAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCC 105867 | || | | | || ||||||| ||||| ||| |||| || ||| | || Sbjct 46450 CCGACAGAGCTGCGTTTATTGATC--AGTCACAGTCGTTGAACATCCACATCAGAGAACC 46507 Query 105868 AACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGG 105927 || ||| ||| | |||| |||||| | ||| | ||||||||||| | || ||||| Sbjct 46508 TACTATGGGTAAGTTGACTTCCATGCACTTTTACGGATGGAAGAAGGGATTGAAGACGGG 46567 Query 105928 GATGTATTAC 105937 ||||| ||| Sbjct 46568 TATGTACTAC 46577 >seq1 Length=1779567 Score = 86.0 bits (94), Expect = 7e-12 Identities = 222/333 (67%), Gaps = 13/333 (4%) Strand=Plus/Minus Query 9609 TATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT-- 9666 |||||||||||||||| || ||| | ||||| | ||| ||| || ||||| || Sbjct 1280484 TATCAAAACCATCCATTTCAACCAACAACTGGTTCAAAGTAGTTTCACGCTCATCGTTGG 1280425 Query 9667 ---CGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAA 9723 |||| |||| | | | | | ||||| || | |||||||||||| || | || Sbjct 1280424 CTCCGCTTGCATTTCCCTTGGATCTC--TGCTTACCAATGGCATCAATCTCGTCCACAAA 1280367 Query 9724 GACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCC 9783 || ||| |||| ||||| | || || || | || || |||||| ||| || Sbjct 1280366 CACAATGGATGGAGCGTTTTCTCTGGCAGTTTTGAACAAGTCACGCACACGCGAGGCACC 1280307 Query 9784 CACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGAT-GAAGGGGACATTA 9841 ||||||||||||||| || || || | | | || ||| | || |||||| || | Sbjct 1280306 CACACCAACAAACATTTCAACGAACTCAGAACCAGAGACA--GAATAGAAGGGAACTCCA 1280249 Query 9842 GATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGG 9901 | ||| || || ||||| ||| | | ||| ||||| ||||| || ||| | | Sbjct 1280248 GCTTCTCCTGCGGTGGCTTTGGCCAACAAAGTTTTACCGGTACCGGGAGGACCAGACAAA 1280189 Query 9902 AGGGCACCTCGTGGAATCTTGGCGCC--ACTTC 9932 | ||||| || |||||||| || || ||||| Sbjct 1280188 ATAGCACCACGGGGAATCTTAGCACCCAACTTC 1280156 >seq12 Length=420913 Score = 82.4 bits (90), Expect = 9e-11 Identities = 115/160 (72%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 154115 GTTGCGCCACGATCTGGTCTCGCTGTGAAACATGGTATCCAAGTTGGTGCGGGTGTTGTT 154174 || || ||| |||| |||||||| || ||||| || || | ||||| |||||| || Sbjct 286623 GTAGCACCAAGATCGGGTCTCGCAGTCAAACACGGAATTTCAACAGGTGCCGGTGTTATT 286682 Query 154175 GATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTTTTCAATCACGGAGACAAAGACTTT 154234 ||| | ||||||| ||| || || || | ||||||||||| || | | || |||||| Sbjct 286683 GATGCAGACTACAGGGGCGAGGTGAAGATTGTTCTTTTCAACCATTCAAAGAAGGACTTT 286742 Query 154235 GAGGTAAAGAGGGGTGAGCGCATCGCACAACTTGTTCTTG 154274 ||| | || | || || | || |||||| ||| | ||| Sbjct 286743 GAGATCAAAACTGGAGACAGAATTGCACAA-TTGGTGTTG 286781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260413589720