Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq13 120 3e-22
seq28 91.5 2e-13
>seq13
Length=360411
Score = 120 bits (132), Expect = 3e-22
Identities = 656/1040 (63%), Gaps = 18/1040 (2%)
Strand=Plus/Minus
Query 78864 CATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCT 78923
|||||| |||| || || || || || || | ||| || |||| || | ||| |||
Sbjct 45902 CATGAATGCATCAGCAAGACCTTGAACTCCAAGAGCAATAGGTCTGTTTCTCATATTGGA 45843
Query 78924 CTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGT 78983
||| ||| |||| |||||||| || | || |||| | ||||| ||| | ||
Sbjct 45842 TCTTCTGGCTTCCTCAACAGGGTAAAAATTTCTGTCAATGATTCTGTTCAAGTTTCTAGT 45783
Query 78984 GACGACCCGAGTCACCTCGTACAATTTGGCGAAAT-----CA--AAATGATTTCCT-TTG 79035
|| ||| |||||||||| ||| || | || | || || | | | | ||
Sbjct 45782 AACAACCTTGGTCACCTCGTGCAACTTATCAAAGTTGTACCAGGAACTAGATGCATCTTT 45723
Query 79036 ATGAAAGTCGGTAGGCACAGCGATG----CCAGGTTGCACACGGCCGTCTCGTCCGGGCT 79091
| || | | ||||| ||| ||| ||| ||| || || || || || |||
Sbjct 45722 CTCAACGAATGAAGGCAAAGCAATGGAGGCCAAGTTACAGACAGCAACTTCTTCTGGGGA 45663
Query 79092 AGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTG 79151
||| ||||| || || ||||| ||||| || ||||| | || | |||||| ||
Sbjct 45662 AGAGTACTCGACAATCTCACAACACAAGTTAGATGATTTGATAATACCCAAGTTCTTTTG 45603
Query 79152 GTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTG 79211
||| | |||| |||||| || |||||||| ||||| | || || || |||||| ||
Sbjct 45602 GTTAGTTTTCTTGTTACAAGCATCCTTGTACAACATGAATGGAGTTCCTGTCTCAGTTTG 45543
Query 79212 ACTCTTG--AGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCT-TCTTGTACCGACC 79268
| ||| ||| | || ||| | | | ||| ||| |||| || | ||
Sbjct 45542 -CGCTTCCAAGATAGA-GTACCAAAGCTTTTGAGCCTTGACGGTGGATCTTCCACGG-CC 45486
Query 79269 CTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCC 79328
| | | ||| | |||||| | | || | || || |||||||| | || ||
Sbjct 45485 TTCTCTCTCATACTTTTCGTACAAAGCTTCAAACTCATCGCCGTAGACATCAGCCAAACC 45426
Query 79329 CGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAA 79388
|| || | || | | || |||||| ||| | ||||| ||| ||||||
Sbjct 45425 AGGAGCTTCATTTGGAGAAAACAAAGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAA 45366
Query 79389 GAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTG 79448
| ||||||||||| || || | ||| | || | | | || || || | || ||
Sbjct 45365 CAAATCCGGGATCCAAAGAGCAGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACCGTG 45306
Query 79449 GTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGC 79508
|||| | | |||| ||||| | ||||| || ||||| ||||||| || || ||
Sbjct 45305 GTTCTTTCTAATGTCGATGAAGTCGAAAATGTCAGCATGCCAAGGCTCCAAGTAAATCGC 45246
Query 79509 GAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAAC 79568
|| | || | |||| ||| || |||| ||| || || || ||||||||||||||
Sbjct 45245 AAAAGCGCCTGGCCTCTTGTTGCCACCTTGGTCGACATAACGTGCTGTGTTGTTGAAAAC 45186
Query 79569 TCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCT 79628
|| | ||| || | ||| |||| | ||||| || || || | || |
Sbjct 45185 ACGCACCATTGGAATGATACCGTTAGAAGTACCGTTAGTACCTGCAATGTAAGCGCCAGT 45126
Query 79629 CGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCA 79688
| ||||| | ||| | || || || || | | |||||| || |||||
Sbjct 45125 ACTTCTGATGTTGTGGATGTGCAAACCAATACCACCAGCACTCTTGGAAATTAAAGCGCA 45066
Query 79689 CTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCA 79748
||| | || ||||| || || ||||| ||||| |||||||| || || ||||| ||
Sbjct 45065 TGTCTTTAATGTGTCGTAAATACCGTCGATGGAGTCATCCTTCATGGCAACAAGGAAACA 45006
Query 79749 GCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAA 79808
|||||| || ||| | ||||| || ||||| | ||| || | |||| || ||
Sbjct 45005 AGACGACATTTGGGGGCTTGGGGTACCTGCATTGAACAAGGTTGGAGAACCGTGAGTAAA 44946
Query 79809 GAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGAT 79868
| | | ||| ||||| || ||| || || | || || | ||| | ||||| ||
Sbjct 44945 GTATCTCTGGGACATCAAATTGTAAGTTTCGATCACACGTTCAATGTCATTCCCGTGAAT 44886
Query 79869 GCCGACCGCGACGCGCATGA 79888
|| ||||| || | |||||
Sbjct 44885 ACCAACCGCAACTCTCATGA 44866
Score = 116 bits (128), Expect = 4e-21
Identities = 1082/1731 (63%), Gaps = 61/1731 (4%)
Strand=Plus/Plus
Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175
||||| |||| ||||| || || || || | ||| | || || ||| || |||
Sbjct 44866 TCATGAGAGTTGCGGTTGGTATTCACGGGAATGACATTGAACGTGTGATCGAAACTTACA 44925
Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235
| ||||| ||||| | ||| || |||| | || ||| | ||||| || |||||
Sbjct 44926 ATTTGATGTCCCAGAGATACTTTACTCACGGTTCTCCAACCTTGTTCAATGCAGGTACCC 44985
Query 19236 ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCA 19295
| ||| || |||||| |||||||| || || |||||||||||| ||| || || |
Sbjct 44986 CAAGCCCCCAAATGTCGTCTTGTTTCCTTGTTGCCATGAAGGATGACTCCATCGACGGTA 45045
Query 19296 TCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCC 19355
| ||||| || | ||| ||||| || |||||| | | || ||||| || | |
Sbjct 45046 TTTACGACACATTAAAGACATGCGCTTTAATTTCCAAGAGTGCTGGTGGTATTGGTTTGC 45105
Query 19356 ACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACG 19415
|| | || ||| | | ||| | || || || ||||| | |||
Sbjct 45106 ACATCCACAACATCAGAAGTACTGGCGCTTACATTGCAGGTACTAACGGTACTTCTAACG 45165
Query 19416 GTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCG 19475
||||| | |||||| | || || ||||||||||| || | || ||| |||| || |||
Sbjct 45166 GTATCATTCCAATGGTGCGTGTTTTCAACAACACAGCACGTTATGTCGACCAAGGTGGCA 45225
Query 19476 GCAA-ACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGAT 19534
||| | || | ||| | || || || ||| | ||||| ||||| || ||| | | ||
Sbjct 45226 ACAAGAGGCCA-GGCGCTTTTGCGATTTACTTGGAGCCTTGGCATGCTGACATTTTCGAC 45284
Query 19535 TTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACG 19594
||| |||| | | |||||| ||| | || || || | | || | ||| |
Sbjct 45285 TTCATCGACATTAGAAAGAACCACGGTAAGGAAGAAATTAGAGCCAGAGATTTGTTCCCT 45344
Query 19595 GCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTG 19654
|| | ||||| ||||| | |||||| ||| ||||| | ||| || ||| ||
Sbjct 45345 GCTCTTTGGATCCCGGATTTGTTCATGAAGAGAGTTGAACAAAACGGTGACTGGACTTTG 45404
Query 19655 ATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTG 19714
| | || | ||| ||||| | | || ||||||||||| | ||| | | |||
Sbjct 45405 TTTTCTCCAAATGAAGCTCCTGGTTTGGCTGATGTCTACGGCGATGAGTTTGAAGCTTTG 45464
Query 19715 TACCGGACTTACGTAGCCCAGGGCCGGTTCAAGA-AGGTGGTCCGGGCCCGGGACGTCTG 19773
||| | || | | |||| || |||| ||| ||| | | | ||
Sbjct 45465 TACGAAAAGTATGAGAGAGAAGGCC-GTGGAAGATCCACCGTCAAGGCTCAAAAGCTTTG 45523
Query 19774 GGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGC 19833
| || || | || || ||||| || || || | ||||| |||||||| ||
Sbjct 45524 GTACTCTATCTTGGAAGCGCAAACTGAGACAGGAACTCCATTCATGTTGTACAAGGATGC 45583
Query 19834 CGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTAC 19893
||| || | || || |||||| | || ||||| || || ||| |||||
Sbjct 45584 TTGTAACAAGAAAACTAACCAAAAGAACTTGGGTATTATCAAATCATCTAACTTGTGTTG 45643
Query 19894 TGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTG 19953
||| || | ||| || || || || ||| || ||||| |||| ||| | ||
Sbjct 45644 TGAGATTGTCGAGTACTCTTCCCCAGAAGAAGTTGCTGTCTGTAACTTGGCCTCCAT-TG 45702
Query 19954 C-CTGCCGACTTTCGTCAAG------GC------CTCCTCCTTCGACTTTGCCAAATTGT 20000
| |||| | ||||| || || |||| | | |||||| || |||
Sbjct 45703 CTTTGCCTTCATTCGTTGAGAAAGATGCATCTAGTTCCTGGTACAACTTTGATAAGTTGC 45762
Query 20001 ACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACC 20060
||||||||||| ||| || || | || |||| | |||| || | || |||||||
Sbjct 45763 ACGAGGTGACCAAGGTTGTTACTAGAAACTTGAACAGAATCATTGACAGAAATTTTTACC 45822
Query 20061 CGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGG 20120
| |||| || | | || |||||| | || | || || || | || || || |
Sbjct 45823 CTGTTGAGGAAGCCAGAAGATCCAATATGAGAAACAGACCTATTGCTCTTGGAGTTCAAG 45882
Query 20121 GCCTGGCCGACGTTTTCATGATGCTCG-GCCTCTCATTCGACGATCCCA--AGGCGCGCG 20177
| || || || | |||||| | || | | | | |||||| ||||| | || |
Sbjct 45883 GTCTTGCTGATGCATTCATG-TCCTTGAGATTGCCTTTCGAC--TCCCAGGAAGCTAAAG 45939
Query 20178 AGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGAAC 20237
|| | |||| || |||||| || | || || || || | | ||| ||| |
Sbjct 45940 AGTTGAACATTCAGATATTCGAGACCATTTATCATGCTGCTGTGGAAGCATCTATCGAGC 45999
Query 20238 TCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCC 20297
| || | ||||| || || || ||||| | | || || || ||||| |||| |
Sbjct 46000 TTGCTCAGGAGGAAGGTCCATATGAGACATATGAAGGTTCTCCTGCGTCAAAGGGATTGT 46059
Query 20298 TCCAGCCGGACATGTGGGGCGTCACTGAGA---AT--GAGTT-TTGGAGCGCCCTCAAGG 20351
| ||| ||| |||||| || || | || ||||| | ||| | | |
Sbjct 46060 TGCAGTACGACTTGTGGG-----ACAGAAAGCCATCCGAGTTGTGGGACTGGGAT--ACT 46112
Query 20352 TTGAGATCAA-----GACC---CACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCC 20403
|||| | ||| | || ||||| || | || || ||||| || || || |||||
Sbjct 46113 TTGA-AGCAAAATTTGGCCAAACACGGTCTCAGAAATTCTTTGCTTGTTGCTCCGATGCC 46171
Query 20404 GACCGCCTCGACCGCCCAGATCATGGGGAACAACG-AGGCTTTCGAGCCGTACACGACCA 20462
|| ||||| || | || ||| |||| ||||||| | ||||| || || ||||| |||
Sbjct 46172 AACAGCCTCTACTTCTCAAATCTTGGGTAACAACGAATGCTTT-GAACCTTACACATCCA 46230
Query 20463 ACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTCC 20522
|||| |||| | | || ||||| |||||| || || ||| ||| || |
Sbjct 46231 ACATTTACTCCAGAAGAGTGCTTGCCGGCGAGTTCCAGATTGTTAACCCACACATGTTGA 46290
Query 20523 GCGACTTGCAGAAGA--TCGATATGTGGTCGCCCAAAATTAAGAATGAAAT--TGTCCGA 20578
||||| || || | | ||| ||| ||| || ||||| | || | || |
Sbjct 46291 AGGACTT--AGTTGACTTAGGTATTTGGAATGACAATATGAAGAACAACATCATTGCCAA 46348
Query 20579 GCCGGCGGGAGCGTCCAGGCATT-GGATATCCCCCAGA--ACCTCAAGGACATTTACAGG 20635
| ||| | | ||| | || | || |||||| | ||||| | || |
Sbjct 46349 --CAACGGATCCATTCAGTCTTTACCAAATGTCCCAGACGAAATCAAGCGTTTATATAAA 46406
Query 20636 ACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTAC 20695
||||| ||||||||| | |||||| ||||| |||||||| ||||| | | || |
Sbjct 46407 ACCGTGTGGGAAATCTCTCAGAAGCATATCATTGACATGGCTGCCGACAGAGCTGCGTTT 46466
Query 20696 ATCGACCAGTCCCAGTCGCTCAATGTCTTCAT-GGAGAATCCGAGCCTGGCGAAGCTGAG 20754
|| || ||||| |||||| | || || ||| ||||| || | ||| ||| |||
Sbjct 46467 ATTGATCAGTCACAGTCGTTGAACATCCACATCAGAGAA-CCTACTATGGGTAAGTTGAC 46525
Query 20755 CTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTA 20805
|||||||| | ||||| ||| | ||||| | |||||||| ||||||||
Sbjct 46526 TTCCATGCACTTTTACGGATGGAAGAAGGGATTGAAGACGGGTATGTACTA 46576
Score = 105 bits (116), Expect = 7e-18
Identities = 133/180 (74%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249
|||| ||| |||||||| |||||||| | ||||||||||||||||| | ||||||
Sbjct 46585 GTTCTCAAGTAGTACATACCCGTCTTCAATCCCTTCTTCCATCCGTAAAAGTGCATGGAA 46526
Query 78250 GACAGCTTGGCCAGACTCGGGTTCTC-CATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308
| || ||| ||| | | ||||||| ||| |||||| | |||||| ||||| || ||
Sbjct 46525 GTCAACTTACCCATAGT-AGGTTCTCTGATGTGGATGTTCAACGACTGTGACTGATCAAT 46467
Query 78309 GTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGT 78368
||||| | | |||||| |||||||| |||| ||| || | || ||||| | |||
Sbjct 46466 AAACGCAGCTCTGTCGGCAGCCATGTCAATGATATGCTTCTGAGAGATTTCCCACACGGT 46407
>seq28
Length=63775
Score = 91.5 bits (100), Expect = 2e-13
Identities = 195/289 (67%), Gaps = 2/289 (1%)
Strand=Plus/Minus
Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472
|||| | || |||||| | |||||||| ||||| || || || ||| | ||||| |
Sbjct 54432 ACGGATTAGTTCCAATGTTGAAAGTCTTCAATAACACTGCAAGATATGTCGATCAGGGAG 54373
Query 19473 GCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGG 19532
| |||||| |||| | || || || ||| ||||||| ||||||| |||| ||||||
Sbjct 54372 GAAACAAACGACCGGGCGCATTTGCTATTTACATCGAGCCTTGGCACGGGGACATCATGG 54313
Query 19533 ATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCA 19592
| | || ||||| || ||| || || || || || | | ||| | |||
Sbjct 54312 AAGTGCTTGAACTTCGAAAGAATCATGGCCCTGATGAATTGAGAGCGAGAGACTTGTTCT 54253
Query 19593 CGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACC 19652
||||||||||| || || |||||||| || ||| | || ||| | | ||| |
Sbjct 54252 TTGCCTTGTGGATCCCAGATTTATTCATGAAGCGGGTGAAAAATAACGGAAAGTGG-AGT 54194
Query 19653 TGATGTGCCCGCACGAATGC-CCTGGCCTACCCGACGTCTACGGCGAGG 19700
| || | ||| | || || ||||| || ||||||||| || ||||
Sbjct 54193 TTATTTTCCCCAAGTAAAGCTCCTGGTTTAAGCGACGTCTATGGAGAGG 54145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524436602320
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