Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq13 120 3e-22 seq28 91.5 2e-13 >seq13 Length=360411 Score = 120 bits (132), Expect = 3e-22 Identities = 656/1040 (63%), Gaps = 18/1040 (2%) Strand=Plus/Minus Query 78864 CATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCT 78923 |||||| |||| || || || || || || | ||| || |||| || | ||| ||| Sbjct 45902 CATGAATGCATCAGCAAGACCTTGAACTCCAAGAGCAATAGGTCTGTTTCTCATATTGGA 45843 Query 78924 CTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGT 78983 ||| ||| |||| |||||||| || | || |||| | ||||| ||| | || Sbjct 45842 TCTTCTGGCTTCCTCAACAGGGTAAAAATTTCTGTCAATGATTCTGTTCAAGTTTCTAGT 45783 Query 78984 GACGACCCGAGTCACCTCGTACAATTTGGCGAAAT-----CA--AAATGATTTCCT-TTG 79035 || ||| |||||||||| ||| || | || | || || | | | | || Sbjct 45782 AACAACCTTGGTCACCTCGTGCAACTTATCAAAGTTGTACCAGGAACTAGATGCATCTTT 45723 Query 79036 ATGAAAGTCGGTAGGCACAGCGATG----CCAGGTTGCACACGGCCGTCTCGTCCGGGCT 79091 | || | | ||||| ||| ||| ||| ||| || || || || || ||| Sbjct 45722 CTCAACGAATGAAGGCAAAGCAATGGAGGCCAAGTTACAGACAGCAACTTCTTCTGGGGA 45663 Query 79092 AGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTG 79151 ||| ||||| || || ||||| ||||| || ||||| | || | |||||| || Sbjct 45662 AGAGTACTCGACAATCTCACAACACAAGTTAGATGATTTGATAATACCCAAGTTCTTTTG 45603 Query 79152 GTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTG 79211 ||| | |||| |||||| || |||||||| ||||| | || || || |||||| || Sbjct 45602 GTTAGTTTTCTTGTTACAAGCATCCTTGTACAACATGAATGGAGTTCCTGTCTCAGTTTG 45543 Query 79212 ACTCTTG--AGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCT-TCTTGTACCGACC 79268 | ||| ||| | || ||| | | | ||| ||| |||| || | || Sbjct 45542 -CGCTTCCAAGATAGA-GTACCAAAGCTTTTGAGCCTTGACGGTGGATCTTCCACGG-CC 45486 Query 79269 CTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCC 79328 | | | ||| | |||||| | | || | || || |||||||| | || || Sbjct 45485 TTCTCTCTCATACTTTTCGTACAAAGCTTCAAACTCATCGCCGTAGACATCAGCCAAACC 45426 Query 79329 CGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAA 79388 || || | || | | || |||||| ||| | ||||| ||| |||||| Sbjct 45425 AGGAGCTTCATTTGGAGAAAACAAAGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAA 45366 Query 79389 GAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTG 79448 | ||||||||||| || || | ||| | || | | | || || || | || || Sbjct 45365 CAAATCCGGGATCCAAAGAGCAGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACCGTG 45306 Query 79449 GTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGC 79508 |||| | | |||| ||||| | ||||| || ||||| ||||||| || || || Sbjct 45305 GTTCTTTCTAATGTCGATGAAGTCGAAAATGTCAGCATGCCAAGGCTCCAAGTAAATCGC 45246 Query 79509 GAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAAC 79568 || | || | |||| ||| || |||| ||| || || || |||||||||||||| Sbjct 45245 AAAAGCGCCTGGCCTCTTGTTGCCACCTTGGTCGACATAACGTGCTGTGTTGTTGAAAAC 45186 Query 79569 TCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCT 79628 || | ||| || | ||| |||| | ||||| || || || | || | Sbjct 45185 ACGCACCATTGGAATGATACCGTTAGAAGTACCGTTAGTACCTGCAATGTAAGCGCCAGT 45126 Query 79629 CGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCA 79688 | ||||| | ||| | || || || || | | |||||| || ||||| Sbjct 45125 ACTTCTGATGTTGTGGATGTGCAAACCAATACCACCAGCACTCTTGGAAATTAAAGCGCA 45066 Query 79689 CTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCA 79748 ||| | || ||||| || || ||||| ||||| |||||||| || || ||||| || Sbjct 45065 TGTCTTTAATGTGTCGTAAATACCGTCGATGGAGTCATCCTTCATGGCAACAAGGAAACA 45006 Query 79749 GCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAA 79808 |||||| || ||| | ||||| || ||||| | ||| || | |||| || || Sbjct 45005 AGACGACATTTGGGGGCTTGGGGTACCTGCATTGAACAAGGTTGGAGAACCGTGAGTAAA 44946 Query 79809 GAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGAT 79868 | | | ||| ||||| || ||| || || | || || | ||| | ||||| || Sbjct 44945 GTATCTCTGGGACATCAAATTGTAAGTTTCGATCACACGTTCAATGTCATTCCCGTGAAT 44886 Query 79869 GCCGACCGCGACGCGCATGA 79888 || ||||| || | ||||| Sbjct 44885 ACCAACCGCAACTCTCATGA 44866 Score = 116 bits (128), Expect = 4e-21 Identities = 1082/1731 (63%), Gaps = 61/1731 (4%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||| |||| ||||| || || || || | ||| | || || ||| || ||| Sbjct 44866 TCATGAGAGTTGCGGTTGGTATTCACGGGAATGACATTGAACGTGTGATCGAAACTTACA 44925 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 | ||||| ||||| | ||| || |||| | || ||| | ||||| || ||||| Sbjct 44926 ATTTGATGTCCCAGAGATACTTTACTCACGGTTCTCCAACCTTGTTCAATGCAGGTACCC 44985 Query 19236 ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCA 19295 | ||| || |||||| |||||||| || || |||||||||||| ||| || || | Sbjct 44986 CAAGCCCCCAAATGTCGTCTTGTTTCCTTGTTGCCATGAAGGATGACTCCATCGACGGTA 45045 Query 19296 TCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCC 19355 | ||||| || | ||| ||||| || |||||| | | || ||||| || | | Sbjct 45046 TTTACGACACATTAAAGACATGCGCTTTAATTTCCAAGAGTGCTGGTGGTATTGGTTTGC 45105 Query 19356 ACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACG 19415 || | || ||| | | ||| | || || || ||||| | ||| Sbjct 45106 ACATCCACAACATCAGAAGTACTGGCGCTTACATTGCAGGTACTAACGGTACTTCTAACG 45165 Query 19416 GTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCG 19475 ||||| | |||||| | || || ||||||||||| || | || ||| |||| || ||| Sbjct 45166 GTATCATTCCAATGGTGCGTGTTTTCAACAACACAGCACGTTATGTCGACCAAGGTGGCA 45225 Query 19476 GCAA-ACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGAT 19534 ||| | || | ||| | || || || ||| | ||||| ||||| || ||| | | || Sbjct 45226 ACAAGAGGCCA-GGCGCTTTTGCGATTTACTTGGAGCCTTGGCATGCTGACATTTTCGAC 45284 Query 19535 TTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACG 19594 ||| |||| | | |||||| ||| | || || || | | || | ||| | Sbjct 45285 TTCATCGACATTAGAAAGAACCACGGTAAGGAAGAAATTAGAGCCAGAGATTTGTTCCCT 45344 Query 19595 GCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTG 19654 || | ||||| ||||| | |||||| ||| ||||| | ||| || ||| || Sbjct 45345 GCTCTTTGGATCCCGGATTTGTTCATGAAGAGAGTTGAACAAAACGGTGACTGGACTTTG 45404 Query 19655 ATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTG 19714 | | || | ||| ||||| | | || ||||||||||| | ||| | | ||| Sbjct 45405 TTTTCTCCAAATGAAGCTCCTGGTTTGGCTGATGTCTACGGCGATGAGTTTGAAGCTTTG 45464 Query 19715 TACCGGACTTACGTAGCCCAGGGCCGGTTCAAGA-AGGTGGTCCGGGCCCGGGACGTCTG 19773 ||| | || | | |||| || |||| ||| ||| | | | || Sbjct 45465 TACGAAAAGTATGAGAGAGAAGGCC-GTGGAAGATCCACCGTCAAGGCTCAAAAGCTTTG 45523 Query 19774 GGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGC 19833 | || || | || || ||||| || || || | ||||| |||||||| || Sbjct 45524 GTACTCTATCTTGGAAGCGCAAACTGAGACAGGAACTCCATTCATGTTGTACAAGGATGC 45583 Query 19834 CGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTAC 19893 ||| || | || || |||||| | || ||||| || || ||| ||||| Sbjct 45584 TTGTAACAAGAAAACTAACCAAAAGAACTTGGGTATTATCAAATCATCTAACTTGTGTTG 45643 Query 19894 TGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTG 19953 ||| || | ||| || || || || ||| || ||||| |||| ||| | || Sbjct 45644 TGAGATTGTCGAGTACTCTTCCCCAGAAGAAGTTGCTGTCTGTAACTTGGCCTCCAT-TG 45702 Query 19954 C-CTGCCGACTTTCGTCAAG------GC------CTCCTCCTTCGACTTTGCCAAATTGT 20000 | |||| | ||||| || || |||| | | |||||| || ||| Sbjct 45703 CTTTGCCTTCATTCGTTGAGAAAGATGCATCTAGTTCCTGGTACAACTTTGATAAGTTGC 45762 Query 20001 ACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACC 20060 ||||||||||| ||| || || | || |||| | |||| || | || ||||||| Sbjct 45763 ACGAGGTGACCAAGGTTGTTACTAGAAACTTGAACAGAATCATTGACAGAAATTTTTACC 45822 Query 20061 CGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGG 20120 | |||| || | | || |||||| | || | || || || | || || || | Sbjct 45823 CTGTTGAGGAAGCCAGAAGATCCAATATGAGAAACAGACCTATTGCTCTTGGAGTTCAAG 45882 Query 20121 GCCTGGCCGACGTTTTCATGATGCTCG-GCCTCTCATTCGACGATCCCA--AGGCGCGCG 20177 | || || || | |||||| | || | | | | |||||| ||||| | || | Sbjct 45883 GTCTTGCTGATGCATTCATG-TCCTTGAGATTGCCTTTCGAC--TCCCAGGAAGCTAAAG 45939 Query 20178 AGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGAAC 20237 || | |||| || |||||| || | || || || || | | ||| ||| | Sbjct 45940 AGTTGAACATTCAGATATTCGAGACCATTTATCATGCTGCTGTGGAAGCATCTATCGAGC 45999 Query 20238 TCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCC 20297 | || | ||||| || || || ||||| | | || || || ||||| |||| | Sbjct 46000 TTGCTCAGGAGGAAGGTCCATATGAGACATATGAAGGTTCTCCTGCGTCAAAGGGATTGT 46059 Query 20298 TCCAGCCGGACATGTGGGGCGTCACTGAGA---AT--GAGTT-TTGGAGCGCCCTCAAGG 20351 | ||| ||| |||||| || || | || ||||| | ||| | | | Sbjct 46060 TGCAGTACGACTTGTGGG-----ACAGAAAGCCATCCGAGTTGTGGGACTGGGAT--ACT 46112 Query 20352 TTGAGATCAA-----GACC---CACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCC 20403 |||| | ||| | || ||||| || | || || ||||| || || || ||||| Sbjct 46113 TTGA-AGCAAAATTTGGCCAAACACGGTCTCAGAAATTCTTTGCTTGTTGCTCCGATGCC 46171 Query 20404 GACCGCCTCGACCGCCCAGATCATGGGGAACAACG-AGGCTTTCGAGCCGTACACGACCA 20462 || ||||| || | || ||| |||| ||||||| | ||||| || || ||||| ||| Sbjct 46172 AACAGCCTCTACTTCTCAAATCTTGGGTAACAACGAATGCTTT-GAACCTTACACATCCA 46230 Query 20463 ACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTCC 20522 |||| |||| | | || ||||| |||||| || || ||| ||| || | Sbjct 46231 ACATTTACTCCAGAAGAGTGCTTGCCGGCGAGTTCCAGATTGTTAACCCACACATGTTGA 46290 Query 20523 GCGACTTGCAGAAGA--TCGATATGTGGTCGCCCAAAATTAAGAATGAAAT--TGTCCGA 20578 ||||| || || | | ||| ||| ||| || ||||| | || | || | Sbjct 46291 AGGACTT--AGTTGACTTAGGTATTTGGAATGACAATATGAAGAACAACATCATTGCCAA 46348 Query 20579 GCCGGCGGGAGCGTCCAGGCATT-GGATATCCCCCAGA--ACCTCAAGGACATTTACAGG 20635 | ||| | | ||| | || | || |||||| | ||||| | || | Sbjct 46349 --CAACGGATCCATTCAGTCTTTACCAAATGTCCCAGACGAAATCAAGCGTTTATATAAA 46406 Query 20636 ACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTAC 20695 ||||| ||||||||| | |||||| ||||| |||||||| ||||| | | || | Sbjct 46407 ACCGTGTGGGAAATCTCTCAGAAGCATATCATTGACATGGCTGCCGACAGAGCTGCGTTT 46466 Query 20696 ATCGACCAGTCCCAGTCGCTCAATGTCTTCAT-GGAGAATCCGAGCCTGGCGAAGCTGAG 20754 || || ||||| |||||| | || || ||| ||||| || | ||| ||| ||| Sbjct 46467 ATTGATCAGTCACAGTCGTTGAACATCCACATCAGAGAA-CCTACTATGGGTAAGTTGAC 46525 Query 20755 CTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTA 20805 |||||||| | ||||| ||| | ||||| | |||||||| |||||||| Sbjct 46526 TTCCATGCACTTTTACGGATGGAAGAAGGGATTGAAGACGGGTATGTACTA 46576 Score = 105 bits (116), Expect = 7e-18 Identities = 133/180 (74%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 |||| ||| |||||||| |||||||| | ||||||||||||||||| | |||||| Sbjct 46585 GTTCTCAAGTAGTACATACCCGTCTTCAATCCCTTCTTCCATCCGTAAAAGTGCATGGAA 46526 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTC-CATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308 | || ||| ||| | | ||||||| ||| |||||| | |||||| ||||| || || Sbjct 46525 GTCAACTTACCCATAGT-AGGTTCTCTGATGTGGATGTTCAACGACTGTGACTGATCAAT 46467 Query 78309 GTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGT 78368 ||||| | | |||||| |||||||| |||| ||| || | || ||||| | ||| Sbjct 46466 AAACGCAGCTCTGTCGGCAGCCATGTCAATGATATGCTTCTGAGAGATTTCCCACACGGT 46407 >seq28 Length=63775 Score = 91.5 bits (100), Expect = 2e-13 Identities = 195/289 (67%), Gaps = 2/289 (1%) Strand=Plus/Minus Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472 |||| | || |||||| | |||||||| ||||| || || || ||| | ||||| | Sbjct 54432 ACGGATTAGTTCCAATGTTGAAAGTCTTCAATAACACTGCAAGATATGTCGATCAGGGAG 54373 Query 19473 GCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGG 19532 | |||||| |||| | || || || ||| ||||||| ||||||| |||| |||||| Sbjct 54372 GAAACAAACGACCGGGCGCATTTGCTATTTACATCGAGCCTTGGCACGGGGACATCATGG 54313 Query 19533 ATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCA 19592 | | || ||||| || ||| || || || || || | | ||| | ||| Sbjct 54312 AAGTGCTTGAACTTCGAAAGAATCATGGCCCTGATGAATTGAGAGCGAGAGACTTGTTCT 54253 Query 19593 CGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACC 19652 ||||||||||| || || |||||||| || ||| | || ||| | | ||| | Sbjct 54252 TTGCCTTGTGGATCCCAGATTTATTCATGAAGCGGGTGAAAAATAACGGAAAGTGG-AGT 54194 Query 19653 TGATGTGCCCGCACGAATGC-CCTGGCCTACCCGACGTCTACGGCGAGG 19700 | || | ||| | || || ||||| || ||||||||| || |||| Sbjct 54193 TTATTTTCCCCAAGTAAAGCTCCTGGTTTAAGCGACGTCTATGGAGAGG 54145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524436602320