Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq13 127 2e-24 seq10 109 6e-19 >seq13 Length=360411 Score = 127 bits (140), Expect = 2e-24 Identities = 344/522 (66%), Gaps = 6/522 (1%) Strand=Plus/Plus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC--TACACGCGTG 53237 || ||| || | ||||| | || || | ||||| ||||| | ||| | ||| ||| Sbjct 44853 CCACAGCATTTGATCATGAGAGTTGCGGTTGGTATTCACGGGAATGACATTGAACGTGTG 44912 Query 53238 TCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGT 53297 || | || ||| | || ||| ||| | |||||||| |||| | |||||| ||| Sbjct 44913 ATCG--AAACTTACAATTTGATGTCCCAGAGATACTTTACTCACGGTTCTCCAACCTTGT 44970 Query 53298 TCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATG 53357 |||| || ||||| ||| || |||||| || ||||| || || |||||||||| Sbjct 44971 TCAATGCAGGTACCCCAAGCCCCCAAATGTCGTCTTGTTTCCTTGTTGCCATGAAGGATG 45030 Query 53358 ACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGG 53417 |||| |||||||| || ||||| || | ||| || || || |||||| | | | Sbjct 45031 ACTCCATCGACGGTATTTACGACACATTAAAGACATGCGCTTTAATTTCCAAGAGTGCTG 45090 Query 53418 GTGGTATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGA 53477 ||||||| ||| | ||| | ||| || | | ||| | || || || | Sbjct 45091 GTGGTATTGGTTTGCACATCCACAACATCAGAAGTACTGGCGCTTACATTGCAGGTACTA 45150 Query 53478 ACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACG 53537 |||| | | || ||| | || ||| | || || ||||||||||| || || || | Sbjct 45151 ACGGTACTTCTAACGGTATCATTCCAATGGTGCGTGTTTTCAACAACACAGCACGTTATG 45210 Query 53538 TCAACCAGGGTGGTGGGAAG-CGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCAC 53596 || |||| ||||| ||| || ||| | | || || || ||| | ||||| ||||| Sbjct 45211 TCGACCAAGGTGGCAACAAGAGGCCAGGCG-CTTTTGCGATTTACTTGGAGCCTTGGCAT 45269 Query 53597 GCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC 53656 || |||||| | || || |||| | | ||| || ||| | ||||| || | | Sbjct 45270 GCTGACATTTTCGACTTCATCGACATTAGAAAGAACCACGGTAAGGAAGAAATTAGAGCC 45329 Query 53657 CGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATG 53698 | || |||| | ||||| ||||| ||||| | |||||| Sbjct 45330 AGAGATTTGTTCCCTGCTCTTTGGATCCCGGATTTGTTCATG 45371 Score = 125 bits (138), Expect = 8e-24 Identities = 132/171 (77%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 55745 ACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTAC 55804 || |||||||| || | |||||| | | ||||||||| ||| || | | ||||| Sbjct 46407 ACCGTGTGGGAAATCTCTCAGAAGCATATCATTGACATGGCTGCCGACAGAGCTGCGTTT 46466 Query 55805 ATCGACCAGTCCCAGTCTCTGAACATCTTCATG-GAGAATCCTTCACTGGCCAAGTTGAG 55863 || || ||||| ||||| |||||||| ||| ||||| ||| | ||| ||||||| Sbjct 46467 ATTGATCAGTCACAGTCGTTGAACATCCACATCAGAGAA-CCTACTATGGGTAAGTTGAC 46525 Query 55864 CTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTA 55914 || |||||||||||||| |||||||||||| | ||||||||||||||||| Sbjct 46526 TTCCATGCACTTTTACGGATGGAAGAAGGGATTGAAGACGGGTATGTACTA 46576 >seq10 Length=432243 Score = 109 bits (120), Expect = 6e-19 Identities = 358/550 (65%), Gaps = 16/550 (3%) Strand=Plus/Plus Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 |||||| || ||| | ||||| ||||||| |||||||| || || |||| ||| || Sbjct 412635 GGCAAAGTCAGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTGGAGAACGTAAGACC 412694 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGAT---GGCACAGAAGGAACCACTGAAGAA 74866 |||||| | || | |||||||||||| ||||| |||| || || ||| |||||| Sbjct 412695 AGGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCA---AACGAGCCAGAGAAGAA 412751 Query 74867 GATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC-- 74924 || ||||||||| |||||||| || | | || || ||| || || | ||| Sbjct 412752 AATACCTTCGACAGCAGCAAAGGCCACCAATCTTTCGGCAAACAAGGCCTC-GTCGTCTG 412810 Query 74925 --ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGC-AGGGACAGTATCGATCGCT 74981 ||||| || ||||| || || ||| | | | || ||||| | ||||| || Sbjct 412811 CGATCCATCTCAAGGCCCACTCGGC-CTTCTTCTTAATGCAAGGGATGTTTTCGATAGCG 412869 Query 74982 TGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTAC 75041 | ||| | | ||||| || || |||| | ||| |||| | ||||| Sbjct 412870 TTGAACAAAAAGTCAGCCTCTTTAGGGTCTTTGATGTAGGAGTCGATCAACAAAGAGTAG 412929 Query 75042 GTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCA 75101 || ||||| || || || | | |||| | |||||||| | ||||||| Sbjct 412930 GTTTCCGAGTGGATGTTTTCCATCATGATCTGGAATCCGTAGAAACATTTGGCCTCTGGG 412989 Query 75102 ATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCG 75161 ||||| || || ||||| ||| | | ||||| |||| || |||||||| || Sbjct 412990 ATCTGGACCTCAGCAGAAAAGTTCTCCACCAAGTTCTCATTGACAATTCCGTCCGAAGCA 413049 Query 75162 GCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGT---TTGTCC 75218 || || ||||||| || | ||| ||| | ||| | |||||| | | || | | Sbjct 413050 GCAAAGAAAGCCAACACTCTGGAGATGAAGAATCTCTCGTTGTCAGTCATTCTGTTCTTC 413109 Query 75219 CAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAACTCCCAATCGCC 75278 || || || | ||| || ||| ||||| || || | ||||||||| | ||| Sbjct 413110 CAGTCGTTGATGTCTTTCGACAAGTCAATTTCTTCCGCAGTCCAGAAAGATGCTTCGGCC 413169 Query 75279 TTTTTGTACA 75288 |||||||||| Sbjct 413170 TTTTTGTACA 413179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215637469400