Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq13 127 2e-24
seq10 109 6e-19
>seq13
Length=360411
Score = 127 bits (140), Expect = 2e-24
Identities = 344/522 (66%), Gaps = 6/522 (1%)
Strand=Plus/Plus
Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC--TACACGCGTG 53237
|| ||| || | ||||| | || || | ||||| ||||| | ||| | ||| |||
Sbjct 44853 CCACAGCATTTGATCATGAGAGTTGCGGTTGGTATTCACGGGAATGACATTGAACGTGTG 44912
Query 53238 TCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGT 53297
|| | || ||| | || ||| ||| | |||||||| |||| | |||||| |||
Sbjct 44913 ATCG--AAACTTACAATTTGATGTCCCAGAGATACTTTACTCACGGTTCTCCAACCTTGT 44970
Query 53298 TCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATG 53357
|||| || ||||| ||| || |||||| || ||||| || || ||||||||||
Sbjct 44971 TCAATGCAGGTACCCCAAGCCCCCAAATGTCGTCTTGTTTCCTTGTTGCCATGAAGGATG 45030
Query 53358 ACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGG 53417
|||| |||||||| || ||||| || | ||| || || || |||||| | | |
Sbjct 45031 ACTCCATCGACGGTATTTACGACACATTAAAGACATGCGCTTTAATTTCCAAGAGTGCTG 45090
Query 53418 GTGGTATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGA 53477
||||||| ||| | ||| | ||| || | | ||| | || || || |
Sbjct 45091 GTGGTATTGGTTTGCACATCCACAACATCAGAAGTACTGGCGCTTACATTGCAGGTACTA 45150
Query 53478 ACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACG 53537
|||| | | || ||| | || ||| | || || ||||||||||| || || || |
Sbjct 45151 ACGGTACTTCTAACGGTATCATTCCAATGGTGCGTGTTTTCAACAACACAGCACGTTATG 45210
Query 53538 TCAACCAGGGTGGTGGGAAG-CGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCAC 53596
|| |||| ||||| ||| || ||| | | || || || ||| | ||||| |||||
Sbjct 45211 TCGACCAAGGTGGCAACAAGAGGCCAGGCG-CTTTTGCGATTTACTTGGAGCCTTGGCAT 45269
Query 53597 GCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC 53656
|| |||||| | || || |||| | | ||| || ||| | ||||| || | |
Sbjct 45270 GCTGACATTTTCGACTTCATCGACATTAGAAAGAACCACGGTAAGGAAGAAATTAGAGCC 45329
Query 53657 CGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATG 53698
| || |||| | ||||| ||||| ||||| | ||||||
Sbjct 45330 AGAGATTTGTTCCCTGCTCTTTGGATCCCGGATTTGTTCATG 45371
Score = 125 bits (138), Expect = 8e-24
Identities = 132/171 (77%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 55745 ACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTAC 55804
|| |||||||| || | |||||| | | ||||||||| ||| || | | |||||
Sbjct 46407 ACCGTGTGGGAAATCTCTCAGAAGCATATCATTGACATGGCTGCCGACAGAGCTGCGTTT 46466
Query 55805 ATCGACCAGTCCCAGTCTCTGAACATCTTCATG-GAGAATCCTTCACTGGCCAAGTTGAG 55863
|| || ||||| ||||| |||||||| ||| ||||| ||| | ||| |||||||
Sbjct 46467 ATTGATCAGTCACAGTCGTTGAACATCCACATCAGAGAA-CCTACTATGGGTAAGTTGAC 46525
Query 55864 CTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTA 55914
|| |||||||||||||| |||||||||||| | |||||||||||||||||
Sbjct 46526 TTCCATGCACTTTTACGGATGGAAGAAGGGATTGAAGACGGGTATGTACTA 46576
>seq10
Length=432243
Score = 109 bits (120), Expect = 6e-19
Identities = 358/550 (65%), Gaps = 16/550 (3%)
Strand=Plus/Plus
Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809
|||||| || ||| | ||||| ||||||| |||||||| || || |||| ||| ||
Sbjct 412635 GGCAAAGTCAGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTGGAGAACGTAAGACC 412694
Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGAT---GGCACAGAAGGAACCACTGAAGAA 74866
|||||| | || | |||||||||||| ||||| |||| || || ||| ||||||
Sbjct 412695 AGGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCA---AACGAGCCAGAGAAGAA 412751
Query 74867 GATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC-- 74924
|| ||||||||| |||||||| || | | || || ||| || || | |||
Sbjct 412752 AATACCTTCGACAGCAGCAAAGGCCACCAATCTTTCGGCAAACAAGGCCTC-GTCGTCTG 412810
Query 74925 --ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGC-AGGGACAGTATCGATCGCT 74981
||||| || ||||| || || ||| | | | || ||||| | ||||| ||
Sbjct 412811 CGATCCATCTCAAGGCCCACTCGGC-CTTCTTCTTAATGCAAGGGATGTTTTCGATAGCG 412869
Query 74982 TGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTAC 75041
| ||| | | ||||| || || |||| | ||| |||| | |||||
Sbjct 412870 TTGAACAAAAAGTCAGCCTCTTTAGGGTCTTTGATGTAGGAGTCGATCAACAAAGAGTAG 412929
Query 75042 GTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCA 75101
|| ||||| || || || | | |||| | |||||||| | |||||||
Sbjct 412930 GTTTCCGAGTGGATGTTTTCCATCATGATCTGGAATCCGTAGAAACATTTGGCCTCTGGG 412989
Query 75102 ATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCG 75161
||||| || || ||||| ||| | | ||||| |||| || |||||||| ||
Sbjct 412990 ATCTGGACCTCAGCAGAAAAGTTCTCCACCAAGTTCTCATTGACAATTCCGTCCGAAGCA 413049
Query 75162 GCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGT---TTGTCC 75218
|| || ||||||| || | ||| ||| | ||| | |||||| | | || | |
Sbjct 413050 GCAAAGAAAGCCAACACTCTGGAGATGAAGAATCTCTCGTTGTCAGTCATTCTGTTCTTC 413109
Query 75219 CAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAACTCCCAATCGCC 75278
|| || || | ||| || ||| ||||| || || | ||||||||| | |||
Sbjct 413110 CAGTCGTTGATGTCTTTCGACAAGTCAATTTCTTCCGCAGTCCAGAAAGATGCTTCGGCC 413169
Query 75279 TTTTTGTACA 75288
||||||||||
Sbjct 413170 TTTTTGTACA 413179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215637469400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |