Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq14 136 5e-27
seq1 116 4e-21
seq13 87.8 2e-12
>seq14
Length=288459
Score = 136 bits (150), Expect = 5e-27
Identities = 149/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || ||||| | ||||| ||||| || ||| | || |||||||| |
Sbjct 84617 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAGTCTTCT 84558
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | || |||||||||| |||||||| ||||||||||||||||||
Sbjct 84557 GACACCATTGACAACGTTAAATCTAAAATTCAAGACAAGGAAGGAATTCCTCCAGACCAG 84498
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || || |||||||||||| | || || | | || | | ||||| ||
Sbjct 84497 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCCGACTACAAC 84438
Query 27586 GTCCAAAAGGAATCCACT 27603
|||||||||| ||||||
Sbjct 84437 ATCCAAAAGGAGTCCACT 84420
Score = 129 bits (142), Expect = 7e-25
Identities = 154/208 (74%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 27398 TTACTA--TAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGT 27455
|||||| |||||||||||||||| || || | ||||||||||| || || | || ||
Sbjct 85083 TTACTACATAATGCAAATCTTTGTTAAAACCTTGACCGGCAAGACCATCACATTGGAAGT 85024
Query 27456 TGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCC 27515
||| || || | || | || | ||| | || || || || ||||||||||||||
Sbjct 85023 TGAATCTTCCGACACTATCGACAACGTTAAGTCCAAGATCCAAGATAAGGAGGGAATTCC 84964
Query 27516 TCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGC 27575
||| |||||||| | | |||||||||||||||||| | || || | | | ||| | |
Sbjct 84963 TCCTGACCAGCAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTC 84904
Query 27576 AGACTATAATGTCCAAAAGGAATCCACT 27603
||||| || |||||||||| ||||||
Sbjct 84903 CGACTACAACATCCAAAAGGAGTCCACT 84876
Score = 109 bits (120), Expect = 6e-19
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || ||||| | ||||| ||||| || ||| | || ||||| ||
Sbjct 84161 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCGTCC 84102
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||| | || || || ||||||||||||||||| || ||||||
Sbjct 84101 GACACTATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATTCCACCTGACCAG 84042
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || || |||||||||||| | || |||| | || | | ||||| ||
Sbjct 84041 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCCGACTACAAC 83982
Query 27586 GTCCAAAAGGAATCCACT 27603
| || ||||||||||||
Sbjct 83981 ATTCAGAAGGAATCCACT 83964
Score = 109 bits (120), Expect = 6e-19
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || ||||| | ||||| ||||| || ||| | || ||||| ||
Sbjct 84389 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCGTCC 84330
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||| | || || || ||||||||||||||||| || ||||||
Sbjct 84329 GACACTATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATTCCACCTGACCAG 84270
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || || |||||||||||| | || || | | || | | ||||| ||
Sbjct 84269 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCCGACTACAAC 84210
Query 27586 GTCCAAAAGGAATCCACT 27603
|||||||||| ||||||
Sbjct 84209 ATCCAAAAGGAGTCCACT 84192
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| | || || ||||| || ||| | || ||||| ||
Sbjct 84845 ATGCAAATTTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 84786
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||| | || || || |||||||||||||| || || ||||||
Sbjct 84785 GACACAATTGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATCCCACCTGACCAG 84726
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || || |||||||||||| | || || | | | ||| | | ||||| ||
Sbjct 84725 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAAC 84666
Query 27586 GTCCAAAAGGAATCCAC 27602
| || |||||||| ||
Sbjct 84665 ATTCAGAAGGAATCTAC 84649
>seq1
Length=1779567
Score = 116 bits (128), Expect = 4e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||| ||||| | || || ||||| ||||| | ||||| || || |
Sbjct 999478 ATGCAAATCTTTGTTAAGACTTTGACAGGTAAGACCATTACCTTGGAGGTCGAATCCTCT 999537
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| | || || || |||||||| || ||||| || ||||||
Sbjct 999538 GACACCATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAG 999597
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||| ||||||||| | ||||| | | ||| | | ||||| ||
Sbjct 999598 CAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGACGGCAGAACCTTGTCCGACTACAAC 999657
Query 27586 GTCCAAAAGGAATCCAC 27602
||||||||||||| ||
Sbjct 999658 ATCCAAAAGGAATCTAC 999674
>seq13
Length=360411
Score = 87.8 bits (96), Expect = 2e-12
Identities = 130/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 80036 GCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAG 80095
|||| | || |||||||| |||||||| | ||||||||||| ||||| | |||||| |
Sbjct 46587 GCGTTCTCAAGTAGTACATACCCGTCTTCAATCCCTTCTTCCATCCGTAAAAGTGCATGG 46528
Query 80096 AACTGAGCTTCGCAAGTGTGGGGTTCTC-CATGAAGATGTTCAGAGACTGAGACTGACAG 80154
|| | | ||| | | || ||||||| ||| |||||||| ||||| ||||||
Sbjct 46527 AAGTCAACTTACCCATAGT-AGGTTCTCTGATGTGGATGTTCAACGACTGTGACTGATCA 46469
Query 80155 ATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACT 80214
|| || || | | || || ||||| ||||| || ||| || | |||||||| ||
Sbjct 46468 ATAAACGCAGCTCTGTCGGCAGCCATGTCAATGATATGCTTCTGAGAGATTTCCCACACG 46409
Query 80215 GT 80216
||
Sbjct 46408 GT 46407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310022169360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |