Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq14 96.9 2e-15
seq1 96.9 2e-15
>seq14
Length=288459
Score = 96.9 bits (106), Expect = 2e-15
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 27904 GAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGAT 27963
|| |||||| | || |||||||| || || |||||||| |||| | | |||||||||
Sbjct 84959 GACCAGCAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGAC 84900
Query 27964 TACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||||||| ||| ||||||||| ||||| ||| | ||| | || ||
Sbjct 84899 TACAACATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 84847
Score = 89.7 bits (98), Expect = 4e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| ||||| |||| || |||||| | || || || || || || ||||||||
Sbjct 84524 GACAAGGAAGGAATTCCTCCAGACCAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAA 84465
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| | | |||||||| |||||||||||||| ||| ||||||||| ||||| |||
Sbjct 84464 GACGGCAGAACTTTGTCCGACTACAACATCCAAAAGGAGTCCACTTTGCACTTGGTGTTG 84405
Query 28003 CGTTTGCGTGGCGG 28016
| ||| | || ||
Sbjct 84404 AGATTGAGAGGTGG 84391
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| || || |||| || |||||| | || || || || || || ||||||||
Sbjct 84296 GACAAGGAGGGAATTCCACCTGACCAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAA 84237
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| | | |||||||| |||||||||||||| ||| ||||||||| ||||| |||
Sbjct 84236 GACGGCAGAACTTTGTCCGACTACAACATCCAAAAGGAGTCCACTTTGCACTTGGTGTTG 84177
Query 28003 CGTTTGCGTGGCGG 28016
| ||| | || ||
Sbjct 84176 AGATTGAGAGGTGG 84163
>seq1
Length=1779567
Score = 96.9 bits (106), Expect = 2e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| ||||| || ||| | || || || ||||| | || |||||| | |
Sbjct 999478 ATGCAAATCTTTGTTAAGACTTTGACAGGTAAGACCATTACCTTGGAGGTCGAATCCTCT 999537
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || ||||| || || || || ||||| |||||| |||| || |
Sbjct 999538 GACACCATCGACAAT--GTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACC 999595
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
||||| | || || |||||||| || |||||||| |||| | | ||||||||| ||||
Sbjct 999596 AGCAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGACGGCAGAACCTTGTCCGACTACA 999655
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| || || ||||| ||||| ||| | ||| | || ||
Sbjct 999656 ACATCCAAAAGGAATCTACCTTGCACTTGGTGTTGAGATTGAGAGGTGG 999704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355862170135131
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |