Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq14 143 6e-29 seq1 131 4e-25 >seq14 Length=288459 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | ||||||||| ||||||||||| || || | | || || || ||||||| || Sbjct 84414 GTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCGTCTTCCAATTG 84473 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || |||||||| | | ||| ||||| ||||||| |||||||||||| || || || Sbjct 84474 CTTACCAGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATTTT 84533 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| ||||| || ||||||||||| ||||| || | |||||| ||||| || || Sbjct 84534 AGATTTAACGTTGTCAATGGTGTCAGAAGACTCAACTTCTAAAGTGATGGTCTTACCGGT 84593 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | |||||| || || | ||||| Sbjct 84594 CAAAGTCTTAACGAAGATTTGCAT 84617 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | ||||||||| ||||||||||| || || | | || || || ||||||| || Sbjct 84186 GTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCGTCTTCCAATTG 84245 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || |||||||| | | ||| |||||||| |||| ||| |||||||| |||||||| Sbjct 84246 CTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATTCCCTCCTTGTCTTGGATCTT 84305 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || || || ||||| ||||| || |||||| || | |||||| ||||| || || Sbjct 84306 GGACTTAACATTGTCGATAGTGTCGGACGATTCAACTTCTAAAGTGATGGTCTTACCGGT 84365 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | |||||| || || | ||||| Sbjct 84366 CAAAGTCTTAACGAAGATTTGCAT 84389 Score = 131 bits (144), Expect = 4e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | ||||||||| ||||||||||| || || | | ||| || || ||||||| || Sbjct 84870 GTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCTTCCAATTG 84929 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || || || | | ||| ||||||||||||| ||| ||||| || |||||||| Sbjct 84930 CTTACCAGCAAAAATCAATCTTTGCTGGTCAGGAGGAATTCCCTCCTTATCTTGGATCTT 84989 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || ||||| ||||| ||||| || |||||| || | ||||| ||||| || || Sbjct 84990 GGACTTAACGTTGTCGATAGTGTCGGAAGATTCAACTTCCAATGTGATGGTCTTGCCGGT 85049 Query 211091 GAGAGTCTTTACAAACACCTGCATT 211115 | || || ||||| | |||||| Sbjct 85050 CAAGGTTTTAACAAAGATTTGCATT 85074 >seq1 Length=1779567 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || ||||||||||| || || | | ||| || || || |||| ||||| || Sbjct 999674 GTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCCTCCAATTGCTTACCG 999615 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || ||||| | | ||| |||||||| |||| ||||||||||| |||||||| || Sbjct 999614 GCAAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTA 999555 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || || ||||||||||||||| ||| ||||| | || || ||||| || || | |||| Sbjct 999554 ACATTGTCGATGGTGTCAGAGGATTCGACCTCCAAGGTAATGGTCTTACCTGTCAAAGTC 999495 Query 211098 TTTACAAACACCTGCAT 211114 || ||||| | ||||| Sbjct 999494 TTAACAAAGATTTGCAT 999478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151212863345