Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq14 143 6e-29
seq1 131 4e-25
>seq14
Length=288459
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| | ||||||||| ||||||||||| || || | | || || || ||||||| ||
Sbjct 84414 GTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCGTCTTCCAATTG 84473
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || |||||||| | | ||| ||||| ||||||| |||||||||||| || || ||
Sbjct 84474 CTTACCAGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATTTT 84533
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
||| ||||| || ||||||||||| ||||| || | |||||| ||||| || ||
Sbjct 84534 AGATTTAACGTTGTCAATGGTGTCAGAAGACTCAACTTCTAAAGTGATGGTCTTACCGGT 84593
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| |||||| || || | |||||
Sbjct 84594 CAAAGTCTTAACGAAGATTTGCAT 84617
Score = 138 bits (152), Expect = 3e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| | ||||||||| ||||||||||| || || | | || || || ||||||| ||
Sbjct 84186 GTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCGTCTTCCAATTG 84245
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || |||||||| | | ||| |||||||| |||| ||| |||||||| ||||||||
Sbjct 84246 CTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATTCCCTCCTTGTCTTGGATCTT 84305
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| || || ||||| ||||| || |||||| || | |||||| ||||| || ||
Sbjct 84306 GGACTTAACATTGTCGATAGTGTCGGACGATTCAACTTCTAAAGTGATGGTCTTACCGGT 84365
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| |||||| || || | |||||
Sbjct 84366 CAAAGTCTTAACGAAGATTTGCAT 84389
Score = 131 bits (144), Expect = 4e-25
Identities = 152/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| | ||||||||| ||||||||||| || || | | ||| || || ||||||| ||
Sbjct 84870 GTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCTTCCAATTG 84929
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || || || | | ||| ||||||||||||| ||| ||||| || ||||||||
Sbjct 84930 CTTACCAGCAAAAATCAATCTTTGCTGGTCAGGAGGAATTCCCTCCTTATCTTGGATCTT 84989
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| ||||| ||||| || |||||| || | ||||| ||||| || ||
Sbjct 84990 GGACTTAACGTTGTCGATAGTGTCGGAAGATTCAACTTCCAATGTGATGGTCTTGCCGGT 85049
Query 211091 GAGAGTCTTTACAAACACCTGCATT 211115
| || || ||||| | ||||||
Sbjct 85050 CAAGGTTTTAACAAAGATTTGCATT 85074
>seq1
Length=1779567
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| || || ||||||||||| || || | | ||| || || || |||| ||||| ||
Sbjct 999674 GTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCCTCCAATTGCTTACCG 999615
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| ||||| | | ||| |||||||| |||| ||||||||||| |||||||| ||
Sbjct 999614 GCAAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTA 999555
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
|| || ||||||||||||||| ||| ||||| | || || ||||| || || | ||||
Sbjct 999554 ACATTGTCGATGGTGTCAGAGGATTCGACCTCCAAGGTAATGGTCTTACCTGTCAAAGTC 999495
Query 211098 TTTACAAACACCTGCAT 211114
|| ||||| | |||||
Sbjct 999494 TTAACAAAGATTTGCAT 999478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151212863345
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |