Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq13 389 5e-103 seq10 266 4e-66 seq28 100 4e-16 >seq13 Length=360411 Score = 389 bits (430), Expect = 5e-103 Identities = 1217/1864 (65%), Gaps = 37/1864 (2%) Strand=Plus/Minus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 |||||||| || | || || || | || || | | ||||||||||| || || | Sbjct 46615 GTAAACTGGATCGCAGCAGCAGCAGCTTGCGTTCTCAAGTAGTACATACCCGTCTTCAAT 46556 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 ||| |||||||||| || |||||| |||| || | |||| || || Sbjct 46555 CCCTTCTTCCATCCGTAAAAGTGCATGGAAGTCAACTTACCCATAGTAGGTTCTCTGATG 46496 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 || || |||| |||||| ||||| || || || |||| || || ||||| | || Sbjct 46495 TGGATGTTCAACGACTGTGACTGATCAATAAACGCAGCTCTGTCGGCAGCCATGTCAATG 46436 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 || ||| |||| |||||||| | ||||| | | | ||||| || ||||| | Sbjct 46435 ATATGCTTCTGAGAGATTTCCCACACGGTTTTATATAAACGCTTGATTTCGTCTGGGACA 46376 Query 77022 TTTGT---ATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 |||| | |||||||| || | | || || | ||||| |||| |||||| Sbjct 46375 TTTGGTAAAGACTGAATGGATCCGTTGTTGGCAATGATGTTGTTCTTCATATTGTCATTC 46316 Query 77079 CACAATTTCCTC--TCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTC 77136 || | | ||| || ||| | | | | || || ||||| || || || || | Sbjct 46315 CAAA--TACCTAAGTCAACTAAGTCCTTCAACATGTGTGGGTTAACAATCTGGAACTCGC 46258 Query 77137 CAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTC 77196 | | | ||||| | | |||||| || || || ||||| | |||| ||||| | Sbjct 46257 CGGCAAGCACTCTTCTGGAGTAAATGTTGGATGTGTAAGGTTCAAAGCATTCGTTGTTAC 46198 Query 77197 CCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGAC 77256 |||| ||||||| |||||| || |||||||| || || || | ||| ||||||||||| Sbjct 46197 CCAAGATTTGAGAAGTAGAGGCTGTTGGCATCGGAGCAACAAGCAAAGAATTTCTGAGAC 46138 Query 77257 CATGTGTT-CTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACA 77315 | ||| | | | ||| ||| | ||| ||| ||||| | || || || Sbjct 46137 CGTGTTTGGCCAAATTTTGCTTCAAAGTATC-CCAGTCCCACAACTCGGATGGCTTTCTG 46079 Query 77316 TCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAA 77375 ||||| | ||||| || | | ||| || ||| || || | |||||| ||||| Sbjct 46078 TCCCACAAGTCGTACTGCAACAATCCCTTTGACGCAGGAGAACCTTCATATGTCTCATAT 46019 Query 77376 GGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCG 77435 || ||||| | ||| || || | ||||||| || | | |||||| || ||| Sbjct 46018 GGACCTTCCTCCTGAGCAAGCTCGATAGATGCTTCCACAGCAGCATGATAAATGGTCTCG 45959 Query 77436 AAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGA-AT 77494 || |||| | || | |||| ||||| || || || ||| | || || || Sbjct 45958 AATATCTGAATGTTCAACTCTTTAGCTTCCTGGGAGTCGAAAGGC-AATCTCAAGGACAT 45900 Query 77495 AAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAAT 77554 || ||||| || | || |||||||||| | |||||||||| | |||| ||||||| | Sbjct 45899 GAATGCATCAGCAAGACCTTGAACTCCAAGAGCAATAGGTCTGTTTCTCATATTGGATCT 45840 Query 77555 TTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAAC 77614 | | ||||| || ||| ||| |||| |||| || ||| | || | |||||| ||| Sbjct 45839 TCTGGCTTCCTCAACAGGGTAAAAATTTCTGTCAATGATTCTGTTCAAGTTTCTAGTAAC 45780 Query 77615 TACTTTAACCACGTCCTTTAGTTTAAGAAAAT-----CAA-ATCT---TCCATCTATAAC 77665 || || ||| || | | ||| ||| | || | || | ||||| | | Sbjct 45779 AACCTTGGTCACCTCGTGCAACTTATCAAAGTTGTACCAGGAACTAGATGCATCTTTCTC 45720 Query 77666 AAACA-TGTT--CAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGC 77722 || | || |||||| || || || | ||||| || || || || | | | | Sbjct 45719 AACGAATGAAGGCAAAGCAATGGAGGCCAAGTTACAGACAGCAACTTCTTCTGGGGAAGA 45660 Query 77723 ATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTT 77782 || | | ||||| ||| | ||| |||||||| | |||| || | |||||| Sbjct 45659 GTACTCGACAATCTCACAACACAAGTTAGATGATTTGATAATACCCAAGTTCTTTTGGTT 45600 Query 77783 GCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGA 77842 | || || || || | ||||| || | || || ||||| || || ||| | || | Sbjct 45599 AGTTTTCTTGTTACAAGCATCCTTGTACAACATGAATGGAGTTCCTGTCTCAGTTTGCGC 45540 Query 77843 TTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGAT-TTGTATCGCCTCTCTC 77901 ||| | ||||| | ||| | | ||| || | | ||| || | |||| |||| Sbjct 45539 TTCCAAGATAGAGTACCAAAGCTTTTGAGCCTTGACGGTGGATCTTCCACGGCCT-TCTC 45481 Query 77902 TTTCATA--TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGG 77959 | ||||| || ||| | ||| |||||| ||||| || | |||||| |||| ||||| Sbjct 45480 TCTCATACTTTTCGTACAAAGC--TTCAAACTCATCGCCGTAGACATCAGCCAAACCAGG 45423 Query 77960 GCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAG 78019 ||||||||| | | ||| | ||||||||| | || | ||||| ||||| || | Sbjct 45422 AGCTTCATTTGGAGAAAACAAAGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAACAA 45363 Query 78020 ATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATT 78079 ||| || ||||| |||||| || | ||||| || |||| |||||| || || || Sbjct 45362 ATCCGGGATCCAAAGAGCAGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACCGTGGTT 45303 Query 78080 CTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCAT 78139 |||| ||| |||| || || | ||| |||| |||||| || || | || || || | Sbjct 45302 CTTTCTAATGTCGATGAAGTCGAAAATGTCAGCATGCCAAGGCTCCAAGTAAATCGCAAA 45243 Query 78140 AACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCT 78199 | | || || | || || || || || || | ||| | || ||||| || |||| | Sbjct 45242 AGCGCCTGGCCTCTTGTTGCCACCTTGGTCGACATAACGTGCTGTGTTGTTGAAAACACG 45183 Query 78200 CAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGC 78259 || ||||||||| ||||||||||| || || || || || | ||| ||| ||| | Sbjct 45182 CACCATTGGAATGATACCGTTAGAAGTACCGTTAGTACCTGCAATGTAAGCGCCAGTACT 45123 Query 78260 GCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACG 78319 | || || ||| | || || || || || |||| || |||| |||||| Sbjct 45122 TCTGATGTTGTGGATGTGCAAACCAATACCACCAGCACTCTTGGAAATTAAAGCGCATGT 45063 Query 78320 TTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379 || ||||| ||||| ||||| || || ||||||| ||||| || ||| ||||| Sbjct 45062 CTTTAATGTGTCGTAAATACCGTCGATGGAGTCATCCTTCATGGCAACAAGGAAACAAGA 45003 Query 78380 AGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA 78439 |||||||| | || |||||||| || || || ||||| | || ||||| | Sbjct 45002 CGACATTTGGGGGCTTGGGGTACCTGCATTGAACAAGGTTGGAGAACCGTGAGTAAAGTA 44943 Query 78440 TTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATT--GATGAATT 78497 | | | || | | |||||| ||||| || | ||| |||| |||| ||||| Sbjct 44942 TCTCTGGGACATCAAATTGTAAGTTTCGATCACACGTTCAATGT--CATTCCCGTGAATA 44885 Query 78498 CCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTC 78557 || ||||| || | ||| | || |||||| ||||||||| | ||| || | | | Sbjct 44884 CCAACCGCAACTCTCATGATCAAATGCTGTGGTCTTTCAGCAACCTTCCCGTTGACTCTG 44825 Query 78558 AACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTCT 78615 | |||||||||| |||||||||| || ||||| || |||||||| ||||| ||||| | Sbjct 44824 AGCAAGTATGATCTTTCCAAAGTCTTGAAACCGAAGTAGTTGTAGTTGAAA--TCTCTGT 44767 Query 78616 CGTA 78619 | || Sbjct 44766 CATA 44763 >seq10 Length=432243 Score = 266 bits (294), Expect = 4e-66 Identities = 583/867 (67%), Gaps = 26/867 (3%) Strand=Plus/Plus Query 47871 TTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTA 47930 ||||||||||| || || || ||| |||| || || || |||||||| || ||||| || Sbjct 412363 TTCTCGAAAAAGTTGGTCTTTCCTGCCAAGGAAATGTTCTCCATAAAGTCGAATGGGTTG 412422 Query 47931 ACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCT 47990 |||| |||| || || || || | || || |||||| |||||||| || Sbjct 412423 GTGACATTGTAAACCTTCTTGTTACCCAAGGCCACAAGCAATCTATCGGCAACGAACTCG 412482 Query 47991 ATATATCTTTTCATCATTTCACAATTCATTCCTAT-AAGTTTAACTGGTAGAGCCTCCGT 48049 | ||| ||||| ||||| |||||||| | ||| || |||| | || || || Sbjct 412483 ACGTATTGGCACATCAAGTCACAGTTCATTCCCAACAAGCTTG-CTGGCAAGGCATCGGT 412541 Query 48050 AAGAAACTCTTGTTCGATAGTGACAGCATCC-----ACTATTATCGATGTTACC---GTT 48101 || | |||| ||| |||||||| || || | | || || | | || | ||| Sbjct 412542 AAAGTATTCTTTTTCAATAGTGACGGCCTCAGTAATAATCTTCTCCACGATAGCTGGGTT 412601 Query 48102 TCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGA 48161 | || ||| | ||| || |||| || || ||||| ||| || | | Sbjct 412602 TGGTCTGTTGTT--------CAAGTGAGAGAACAACAAGCAGGCAAAGTCAGTGTGCAAA 412653 Query 48162 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTT 48221 ||||| ||||| | ||| |||||||| || || || ||||| ||||| | || | || Sbjct 412654 CCTTCGTCTCTGCAAATCAATTCGTTGGAGAACGTAAGACCAGGCATCAAACCTCTCTTC 412713 Query 48222 TTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAAT 48281 || | ||| || || | || || || ||||| ||||| || ||||| || || ||||| Sbjct 412714 TTCAACCAGAAGATAGAGGCAAACGAGCCAGAGAAGAAAATACCTTCGACAGCAGCAAAG 412773 Query 48282 GCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCA 48338 || | ||| || | | ||| |||| || | ||||| | ||||| || Sbjct 412774 GCCACCAATCTTTCGGCAAACAAGGCCTCGTCGTCTGCGATCCATCTCAAGGCCCACTCG 412833 Query 48339 GCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTG 48398 ||||||||||| | ||||| || |||| ||||| || || | ||||| || || Sbjct 412834 GCCTTCTTCTTAATGCAAGGGATGTTTTCGATAGCGTTGAACAAAAAGTCAGCCTCTTTA 412893 Query 48399 CTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATT 48458 ||||| | ||| | || || || | | || |||| ||||| || ||||| || Sbjct 412894 GGGTCTTTGATGTAGGAGTCGATCAACAAAGAGTAGGTTTCCGAGTGGATGTTTTCCATC 412953 Query 48459 GCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGT 48518 ||||| |||||||| |||||| | || |||| |||||| ||||| | | |||| Sbjct 412954 ATGATCTGGAATCCGTAGAAACATTTGGCCTCTGGGATCTGGACCTCAGCAGAAAAGTTC 413013 Query 48519 TCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTA 48578 || |||| |||||||| || ||||| || ||||||||| || || || || | | | Sbjct 413014 TCCACCAAGTTCTCATTGACAATTCCGTCCGAAGCAGCAAAGAAAGCCAACAC-TCTGGA 413072 Query 48579 -ATAAAATATTTTTCGTTGGAAGTCAGT---TTATTCCAGTCATTGATATCTTTTGATAT 48634 || || || | |||||| ||||| | || |||||||| ||||| ||||| || | Sbjct 413073 GATGAAGAATCTCTCGTTGTCAGTCATTCTGTTCTTCCAGTCGTTGATGTCTTTCGACAA 413132 Query 48635 ATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATC 48694 || | |||||| || ||||| || ||||| || || ||||| ||||| | ||| || || Sbjct 413133 GTCAATTTCTTCCGCAGTCCAGAAAGATGCTTCGGCCTTTTTGTACATTTGCCAAATCTC 413192 Query 48695 ACTGTATTGGATTGGGAAAATAACAAA 48721 |||| | ||| ||||| | ||||| Sbjct 413193 GTTGTACTTGATAGGGAACAACACAAA 413219 >seq28 Length=63775 Score = 100 bits (110), Expect = 4e-16 Identities = 164/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 78000 TTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTA 78059 || || || ||||| || | ||| || ||||| | |||| || | |||| | ||| Sbjct 54213 TTCACCCGCTTCATGAATAAATCTGGGATCCACAAGGCAAAGAACAAGTCTCTCGCTCTC 54272 Query 78060 TGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCAT 78119 ||| ||| || ||||||| ||| || || | ||||| || || ||||| Sbjct 54273 AATTCATCAGGGCCATGATTCTTTCGAAGTTCAAGCACTTCCATGATGTCCCCGTGCCAA 54332 Query 78120 GGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTG 78179 || || | || || || | | || |||||||| || ||||||||||| | |||||| Sbjct 54333 GGCTCGATGTAAATAGCAAATGCGCCCGGTCGTTTGTTTCCTCCCTGATCGACATATCTT 54392 Query 78180 GCGGTGTTATTATAAACTCTCAACATTGGAA-TAATACCGTTAGATGTTCCATT 78232 || |||||||| | ||| |||||||||||| |||| ||||| || || ||||| Sbjct 54393 GCAGTGTTATTGAAGACTTTCAACATTGGAACTAAT-CCGTTTGAGGTGCCATT 54445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668339781920