Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq13 349 5e-91 seq10 248 1e-60 seq28 114 2e-20 >seq13 Length=360411 Score = 349 bits (386), Expect = 5e-91 Identities = 1184/1826 (65%), Gaps = 39/1826 (2%) Strand=Plus/Minus Query 75416 TAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTG 75475 ||||||||||| || || | ||| |||||||||| || |||||| || | || Sbjct 46576 TAGTACATACCCGTCTTCAATCCCTTCTTCCATCCGTAAAAGTGCATGGAAGTCAACTTA 46517 Query 75476 GAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCT 75535 | | || || || || || |||| |||||| ||||| || || || || Sbjct 46516 CCCATAGTAGGTTCTCTGATGTGGATGTTCAACGACTGTGACTGATCAATAAACGCAGCT 46457 Query 75536 CTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACT 75595 || || || ||||| | || || ||| |||| |||||||| | ||||| | | Sbjct 46456 CTGTCGGCAGCCATGTCAATGATATGCTTCTGAGAGATTTCCCACACGGTTTTATATAAA 46397 Query 75596 TGTTTGATATCATCTGGAAGATTTGT---ATTTTGAATGGATCCGCCATCAGATATAATT 75652 | ||||| || ||||| | ||||| | |||||||||||| | | || || Sbjct 46396 CGCTTGATTTCGTCTGGGACATTTGGTAAAGACTGAATGGATCCGTTGTTGGCAATGATG 46337 Query 75653 GTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAA--AACTC--TAAGGAGATG 75708 | ||||| || | |||||||| | | || || || || || | | | || Sbjct 46336 TTGTTCTTCATATTGTCATTCCAAA----TACCTAAGTCAACTAAGTCCTTCAACATGTG 46281 Query 75709 AGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATA 75768 || |||||||| || || || || | | ||||||| | |||||| || || || Sbjct 46280 TGGGTTAACAATCTGGAACTCGCCGGCAAGCACTCTTCTGGAGTAAATGTTGGATGTGTA 46221 Query 75769 TGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGC 75828 ||||| | |||| ||||| ||||| ||||||| ||| || || || ||||| || || Sbjct 46220 AGGTTCAAAGCATTCGTTGTTACCCAAGATTTGAGAAGTAGAGGCTGTTGGCATCGGAGC 46161 Query 75829 CACCAATAAACTATTTCTGAGACCATGTGTT-CTGATTTTATCTTTTAGATATTTCCAAT 75887 || | ||| |||||||||||| ||| | | | ||| ||| | ||| ||| | Sbjct 46160 AACAAGCAAAGAATTTCTGAGACCGTGTTTGGCCAAATTTTGCTTCAAAGTATC-CCAGT 46102 Query 75888 CCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCAT 75947 |||| | || ||||| ||||| | ||||| || | | ||| || ||| Sbjct 46101 CCCACAACTCGGATGGCTTTCTGTCCCACAAGTCGTACTGCAACAATCCCTTTGACGCAG 46042 Query 75948 ATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTA 76007 || || | |||||| || || | || |||| | ||| || ||| | || || | Sbjct 46041 GAGAACCTTCATATGTCTCATATGGACCTTCCTCCTGAGCAAGCTCGATAGATGCTTCCA 45982 Query 76008 ACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTAT 76067 ||| | | |||||| || ||||| |||| | || | |||| ||||| | | Sbjct 45981 CAGCAGCATGATAAATGGTCTCGAATATCTGAATGTTCAACTCTTTAGCTTCCTGGGAGT 45922 Query 76068 CAAAAGGATAATGTAAAAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATA 76126 | ||||| ||| | || || || |||||||| || || || |||||||||| | ||||| Sbjct 45921 CGAAAGGC-AATCTCAAGGACATGAATGCATCAGCAAGACCTTGAACTCCAAGAGCAATA 45863 Query 76127 GGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATA 76186 ||||| | |||| ||||||| || ||||| || ||||||| |||| | || || Sbjct 45862 GGTCTGTTTCTCATATTGGATCTTCTGGCTTCCTCAACAGGGTAAAAATTTCTGTCAATG 45803 Query 76187 ATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT----- 76241 ||| | || | ||||| ||| || || ||| || | | || ||| | Sbjct 45802 ATTCTGTTCAAGTTTCTAGTAACAACCTTGGTCACCTCGTGCAACTTATCAAAGTTGTAC 45743 Query 76242 CA--AATTT--TCCATCTATCACAAACATATTAAG----AGCTATAGATGCTAGATTACA 76293 || || | | ||||| || ||| | || ||| ||| || || || | ||||| Sbjct 45742 CAGGAACTAGATGCATCTTTCTCAACGA-ATGAAGGCAAAGCAATGGAGGCCAAGTTACA 45684 Query 76294 AACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTT 76353 || || || || | | | || | | ||||| || | ||| | || Sbjct 45683 GACAGCAACTTCTTCTGGGGAAGAGTACTCGACAATCTCACAACACAAGTTAGATGATTT 45624 Query 76354 GATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAA 76413 |||| | || | || | |||||| | || |||||||| | ||||| || | | || Sbjct 45623 GATAATACCCAAGTTCTTTTGGTTAGTTTTCTTGTTACAAGCATCCTTGTACAACATGAA 45564 Query 76414 CGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTAT 76473 |||||||| || ||| | || | ||| | ||||| | ||| | | ||| || | Sbjct 45563 TGGAGTTCCTGTCTCAGTTTGCGCTTCCAAGATAGAGTACCAAAGCTTTTGAGCCTTGAC 45504 Query 76474 TATAGAT-TTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTC 76532 | ||| || | || | ||||| ||||| | | || || |||||| ||||| | Sbjct 45503 GGTGGATCTTCCACGGCCT-TCTCTCTCATACTTTTCGTACAAAGCTTCAAACTCATCGC 45445 Query 76533 CCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTT 76592 | | |||||| ||||||||||| |||||| ||| | | ||| | ||| ||||| | || Sbjct 45444 CGTAGACATCAGCCAAACCAGGAGCTTCATTTGGAGAAAACAAAGTCCAGTCACCGTTTT 45385 Query 76593 CCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTC 76652 | ||| | ||||| || | ||| || ||||| |||||| || | ||||| || || Sbjct 45384 GTTCAACTCTCTTCATGAACAAATCCGGGATCCAAAGAGCAGGGAACAAATCTCTGGCTC 45325 Query 76653 TACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCC 76712 || |||||| || || |||||| ||| || | ||| || | ||| |||| ||||| Sbjct 45324 TAATTTCTTCCTTACCGTGGTTCTTTCTAATGTCGATGAAGTCGAAAATGTCAGCATGCC 45265 Query 76713 ATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATC 76772 | || || | || ||||| | | | || || | || || || || || || | ||| | Sbjct 45264 AAGGCTCCAAGTAAATCGCAAAAGCGCCTGGCCTCTTGTTGCCACCTTGGTCGACATAAC 45205 Query 76773 TGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTC 76832 || ||||| || |||| | || ||||||||| || |||||||| ||||| || || | Sbjct 45204 GTGCTGTGTTGTTGAAAACACGCACCATTGGAATGATACCGTTAGAAGTACCGTTAGTAC 45145 Query 76833 CAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCA 76892 | | ||| ||| ||| | || || || | || || || || || Sbjct 45144 CTGCAATGTAAGCGCCAGTACTTCTGATGTTGTGGATGTGCAAACCAATACCACCAGCAC 45085 Query 76893 TTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCA 76952 | || || |||| ||| || || |||||||| || || || || || |||||| Sbjct 45084 TCTTGGAAATTAAAGCGCATGTCTTTAATGTGTCGTAAATACCGTCGATGGAGTCATCCT 45025 Query 76953 TCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATG 77012 ||||| || ||| ||||| |||||||| | || |||||||| ||||| | Sbjct 45024 TCATGGCAACAAGGAAACAAGACGACATTTGGGGGCTTGGGGTACCTGCATTGAACAAGG 44965 Query 77013 TAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTT 77072 | ||||| | ||||| || || | | || | | |||||| ||||| || || || Sbjct 44964 TTGGAGAACCGTGAGTAAAGTATCTCTGGGACATCAAATTGTAAGTTTCGATCACACGTT 44905 Query 77073 CTATATCCCATT--GATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTC 77130 | || | |||| ||||| || || || || | ||| | || |||||| |||| ||| Sbjct 44904 CAATGT--CATTCCCGTGAATACCAACCGCAACTCTCATGATCAAATGCTGTGGTCTTTC 44847 Query 77131 TACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATA 77190 || ||| || | | | | |||||||||| |||||||||| || ||||| || || Sbjct 44846 AGCAACCTTCCCGTTGACTCTGAGCAAGTATGATCTTTCCAAAGTCTTGAAACCGAAGTA 44787 Query 77191 GTTGTA--TGAAAAGTCTCTTTCGTA 77214 |||||| ||||| ||||| || || Sbjct 44786 GTTGTAGTTGAAA--TCTCTGTCATA 44763 >seq10 Length=432243 Score = 248 bits (274), Expect = 1e-60 Identities = 566/842 (67%), Gaps = 30/842 (4%) Strand=Plus/Plus Query 46360 TTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAACGGATTA 46419 ||||||||||| || || || ||| |||| || || || |||||||| || || || || Sbjct 412363 TTCTCGAAAAAGTTGGTCTTTCCTGCCAAGGAAATGTTCTCCATAAAGTCGAATGGGTTG 412422 Query 46420 GTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCT 46479 || ||||| |||| || || || || | || || |||||| |||||||| || Sbjct 412423 GTGACATTGTAAACCTTCTTGTTACCCAAGGCCACAAGCAATCTATCGGCAACGAACTC- 412481 Query 46480 ATATACGTTTT----CATCATTTCACAATTCATT-CCTATGAGTTTGACCGGTAGAGCCT 46534 |||| || ||||| ||||| |||||| || | || ||| | || | || | Sbjct 412482 ---GACGTATTGGCACATCAAGTCACAGTTCATTCCCAACAAGCTTG-CTGGCAAGGCAT 412537 Query 46535 CCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCG-----ATATTATCGATGTTA-CTG 46588 | |||| | |||| |||||||||||| || || | || || || | | || ||| Sbjct 412538 CGGTAAAGTATTCTTTTTCAATAGTGACGGCCTCAGTAATAATCTTCTCCACGATAGCTG 412597 Query 46589 TTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCACAATGAA 46648 | ||||| | |||| || |||| || || ||||| ||| || | Sbjct 412598 GGT------TTGGTCTGTTGTTCAAGTGAGAGAACAACAAGCAGGCAAAGTCAGTGTGCA 412651 Query 46649 GGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCT 46708 ||||| ||||| | ||| |||||||| || || || || |||||||| | || | || Sbjct 412652 AACCTTCGTCTCTGCAAATCAATTCGTTGGAGAACGTAAGACCAGGCATCAAACCTCTCT 412711 Query 46709 TTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGA 46768 | || | ||| || |||| || || || ||||| ||||| || ||||| ||||| || | Sbjct 412712 TCTTCAACCAGAAGATAGAGGCAAACGAGCCAGAGAAGAAAATACCTTCGACAGCAGCAA 412771 Query 46769 ATGCGACAAGTCTCTCTCCGTAACTGGCATCAT--TATG-AATCCACCTTTGAGCCCAAT 46825 | || || | ||| || | | ||| || | | || ||||| || ||||| | Sbjct 412772 AGGCCACCAATCTTTCGGCAAACAAGGCCTCGTCGTCTGCGATCCATCTCAAGGCCCACT 412831 Query 46826 CAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCAT 46885 | ||||| ||||| | ||||| || |||| ||||| || || | ||||| || | Sbjct 412832 CGGCCTTCTTCTTAATGCAAGGGATGTTTTCGATAGCGTTGAACAAAAAGTCAGCCTCTT 412891 Query 46886 CACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAA 46945 | ||||| | || | || || || | | || |||| || || |||||||| | Sbjct 412892 TAGGGTCTTTGATGTAGGAGTCGATCAACAAAGAGTAGGTTTCCGAGTGGATGTTTTCCA 412951 Query 46946 TAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATC 47005 | ||||| |||||||| |||||| | || || | ||||| ||||| | | |||| Sbjct 412952 TCATGATCTGGAATCCGTAGAAACATTTGGCCTCTGGGATCTGGACCTCAGCAGAAAAGT 413011 Query 47006 GTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTT 47065 || ||| |||||||| || ||||| || ||||||||| || ||||| || | | Sbjct 413012 TCTCCACCAAGTTCTCATTGACAATTCCGTCCGAAGCAGCAAAGAAAGCCAACAC-TCTG 413070 Query 47066 TA-ATAAAATATTTTTCATCGGTAGTCAGT---TTATTCCAGTCATTGATATCTTTTGAT 47121 | || || || | || | | ||||| | || |||||||| ||||| ||||| || Sbjct 413071 GAGATGAAGAATCTCTCGTTGTCAGTCATTCTGTTCTTCCAGTCGTTGATGTCTTTCGAC 413130 Query 47122 ATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATA 47181 | || | |||||| || |||||||| || || || || ||||| ||||| | ||| || Sbjct 413131 AAGTCAATTTCTTCCGCAGTCCAGAAAGATGCTTCGGCCTTTTTGTACATTTGCCAAATC 413190 Query 47182 TC 47183 || Sbjct 413191 TC 413192 >seq28 Length=63775 Score = 114 bits (126), Expect = 2e-20 Identities = 225/330 (68%), Gaps = 2/330 (1%) Strand=Plus/Plus Query 76499 TCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACAT 76558 ||||||| | ||| | | || ||||| ||||| | || || ||||||||| | Sbjct 54117 TCATATTTTTGATAAAGACTCTCGAATTCCTCTCCATAGACGTCGCTTAAACCAGGAGCT 54176 Query 76559 TCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCA 76618 | | | || | | || ||||| || | | || ||||| ||||| || | ||| Sbjct 54177 TTACTTGGGGAAAATAAACTCCACTTTCCGTTATTTTTCACCCGCTTCATGAATAAATCT 54236 Query 76619 GGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTT 76678 || ||||| | |||| || | |||| | ||| ||| ||| || ||||||| Sbjct 54237 GGGATCCACAAGGCAAAGAACAAGTCTCTCGCTCTCAATTCATCAGGGCCATGATTCTTT 54296 Query 76679 TTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACA 76738 ||| || || | ||||| || || ||||| || || | || || || | | Sbjct 54297 CGAAGTTCAAGCACTTCCATGATGTCCCCGTGCCAAGGCTCGATGTAAATAGCAAATGCG 54356 Query 76739 CCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAAC 76798 ||||||||||| || ||||||||||| | |||||| ||||||||||| | ||| ||||| Sbjct 54357 CCCGGTCGTTTGTTTCCTCCCTGATCGACATATCTTGCAGTGTTATTGAAGACTTTCAAC 54416 Query 76799 ATTGGAA-TAATGCCGTTAGATGTACCATT 76827 ||||||| |||| ||||| || || ||||| Sbjct 54417 ATTGGAACTAAT-CCGTTTGAGGTGCCATT 54445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933927680960