Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq14 129 1e-24 seq1 86.0 1e-11 >seq14 Length=288459 Score = 129 bits (142), Expect = 1e-24 Identities = 154/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| ||||| |||||||||||||| |||| |||||||| || ||||| | Sbjct 84411 CAAG-TGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCGTCTTCCA 84469 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || |||||||| | || |||||||| | | ||||||||||| ||||||| Sbjct 84470 ATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGAA 84529 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||| || | || | | |||| ||| ||| ||||| | ||| || || || | Sbjct 84530 TTTTAGATTTAACGTTGTCAATGGTGTCAGAAGACTCAACTTCTAAAGTGATGGTCTTAC 84589 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| ||||||| ||||| Sbjct 84590 CGGTCAAAGTCTTAACGAAGATTTGCAT 84617 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| ||||| |||||||||||||| |||| |||||||| || ||||| | Sbjct 84183 CAAG-TGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCGTCTTCCA 84241 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || |||||||| | || |||||||| | | ||||| ||||| ||||| | Sbjct 84242 ATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATTCCCTCCTTGTCTTGGA 84301 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || ||| | || | |||| || || ||||| | ||| || || || | Sbjct 84302 TCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAACTTCTAAAGTGATGGTCTTAC 84361 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| ||||||| ||||| Sbjct 84362 CGGTCAAAGTCTTAACGAAGATTTGCAT 84389 >seq1 Length=1779567 Score = 86.0 bits (94), Expect = 1e-11 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 ||||| || |||||||||||||| |||| || ||||| || || || | || ||| Sbjct 999674 GTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCCTCCAATTGCTTACCG 999615 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || ||||| | || |||||||| | | || |||||||| ||||| || || || Sbjct 999614 GCAAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTA 999555 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| | || | | |||| || || || || | ||||| || || || || | |||| Sbjct 999554 ACATTGTCGATGGTGTCAGAGGATTCGACCTCCAAGGTAATGGTCTTACCTGTCAAAGTC 999495 Query 152088 TTCACGAAGACCTGCAT 152104 || || |||| ||||| Sbjct 999494 TTAACAAAGATTTGCAT 999478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820016483563