Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq14 165 2e-35
seq1 165 2e-35
seq5 98.7 2e-15
>seq14
Length=288459
Score = 165 bits (182), Expect = 2e-35
Identities = 162/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| || || ||| ||| || || ||||||||||| | | || | |||||| ||
Sbjct 83953 ACCAAGTGCAAAGTGGATTCCTTCTGAATGTTGTAGTCGGACAAAGTTCTGCCATCTTCC 84012
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || || |||||||| | ||| |||||| ||||| |||||||||||||||
Sbjct 84013 AATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATTCCCTCCTTGTCTTGG 84072
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | ||||||||||| || | ||| ||||| | |||||| ||||||
Sbjct 84073 ATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAACTTCTAAAGTGATGGTCTTA 84132
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||||||||||||||| || |||||
Sbjct 84133 CCGGTCAAAGTCTTAACGAAGATTTGCAT 84161
Score = 165 bits (182), Expect = 2e-35
Identities = 162/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| || || ||| || ||||||||||||||||| | | || | ||| || ||
Sbjct 84181 ACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCGTCTTCC 84240
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || || |||||||| | ||| |||||| ||||| |||||||||||||||
Sbjct 84241 AATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATTCCCTCCTTGTCTTGG 84300
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | ||||||||||| || | ||| ||||| | |||||| ||||||
Sbjct 84301 ATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAACTTCTAAAGTGATGGTCTTA 84360
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||||||||||||||| || |||||
Sbjct 84361 CCGGTCAAAGTCTTAACGAAGATTTGCAT 84389
Score = 152 bits (168), Expect = 1e-31
Identities = 151/193 (78%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966
||| || || ||||||||||||| |||| || | || || || | ||| || || || |
Sbjct 84654 TTCCTTCTGAATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATTGCTTACCAGCGA 84712
Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026
||||||| | ||| |||||| || || |||||||||||||||||||| | || ||
Sbjct 84713 AGATCAATCTTTGCTGGTCAGGTGGGATTCCCTCCTTGTCTTGGATCTTGGACTTAACAT 84772
Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
| || || ||||| |||| ||| ||||| | |||||| |||||||| |||||||||||||
Sbjct 84773 TGTCAATTGTGTCGGAAGATTCAACTTCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAA 84832
Query 283087 CGAATATCTGCAT 283099
|||| || |||||
Sbjct 84833 CGAAAATTTGCAT 84845
Score = 149 bits (164), Expect = 1e-30
Identities = 161/211 (76%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|||| || || ||| || ||||||||||||||||| | |||| || | || || ||
Sbjct 84865 ACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAG-GTTCTACCGTCTTC 84923
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| ||| || || ||||| ||||| | ||| |||||| ||||| |||||||| |||||
Sbjct 84924 CAATTGCTTACCAGCAAAAATCAATCTTTGCTGGTCAGGAGGAATTCCCTCCTTATCTTG 84983
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
|||||| | || ||| | ||||||||||| |||| ||| ||||| | ||||| |||||
Sbjct 84984 GATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGATTCAACTTCCAATGTGATGGTCTT 85043
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|| ||||| || ||||| || || ||||||
Sbjct 85044 GCCGGTCAAGGTTTTAACAAAGATTTGCATT 85074
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| || || ||| || ||||||||||||||||| | | || | ||| || ||
Sbjct 84409 ACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCGTCTTCC 84468
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || || |||||||| | ||| ||||| ||||| || |||||||||||
Sbjct 84469 AATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGA 84528
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
|| || | ||| ||| | || || ||||| |||| || ||||| | |||||| ||||||
Sbjct 84529 ATTTTAGATTTAACGTTGTCAATGGTGTCAGAAGACTCAACTTCTAAAGTGATGGTCTTA 84588
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||||||||||||||| || |||||
Sbjct 84589 CCGGTCAAAGTCTTAACGAAGATTTGCAT 84617
>seq1
Length=1779567
Score = 165 bits (182), Expect = 2e-35
Identities = 154/193 (80%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966
||| ||||||||||||||||| | |||| || | ||| ||||| | ||| || |||||||
Sbjct 999669 TTCCTTTTGGATGTTGTAGTCGGACAAG-GTTCTGCCGTCCTCCAATTGCTTACCGGCAA 999611
Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026
||||||| | ||| |||||| |||||||| ||||||||||||||||| | || ||
Sbjct 999610 AGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTAACAT 999551
Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
| ||||| ||||| || | |||||| || | || || |||||||| |||||||||||||
Sbjct 999550 TGTCGATGGTGTCAGAGGATTCGACCTCCAAGGTAATGGTCTTACCTGTCAAAGTCTTAA 999491
Query 283087 CGAATATCTGCAT 283099
| || || |||||
Sbjct 999490 CAAAGATTTGCAT 999478
>seq5
Length=724248
Score = 98.7 bits (108), Expect = 2e-15
Identities = 180/260 (69%), Gaps = 8/260 (3%)
Strand=Plus/Plus
Query 316947 AATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGC 317006
|| ||||||||| | ||| || | | || | ||||| | ||| ||||| || || |
Sbjct 181557 AACGAAGTCAACAACAGAGGTCTCGGCGTCAGTACCGTCAATGTCGTGCTCGACGTAAAC 181616
Query 317007 AGTTTTCAGAATATCCTTC-GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCA 317065
||| | | | | ||| | ||||| ||||| | || ||||| |||| || ||||
Sbjct 181617 GGTTCT-ACATTCGTCTTGAGATGGGAAACCTTCGACTTGGCCGTTGGCAATAGCTCTCA 181675
Query 317066 TCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGA---TTTCCCTTCT 317122
||| || ||||| |||||||| || || || || | ||| || | |||| |||
Sbjct 181676 TCAAGGTAGACTTACCAGCACCGTTAGGACCACACAAACCGTATCTTCTGTTTC---TCT 181732
Query 317123 TCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCAC 317182
||| | || | || ||||||| | |||||| |||| || |||| |||||||||||
Sbjct 181733 TCAATCTGAATTGAGTCTTGTTCAACAAGATCTTAGCACCGTAAGCCAAAGAGAACTCAC 181792
Query 317183 AATCACACAGGTCCTCGCCG 317202
| | ||||| |||||| |||
Sbjct 181793 AGTTACACAAGTCCTCTCCG 181812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738489198662
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |