Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq14 165 2e-35 seq1 165 2e-35 seq5 98.7 2e-15 >seq14 Length=288459 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| || || ||| ||| || || ||||||||||| | | || | |||||| || Sbjct 83953 ACCAAGTGCAAAGTGGATTCCTTCTGAATGTTGTAGTCGGACAAAGTTCTGCCATCTTCC 84012 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || || |||||||| | ||| |||||| ||||| ||||||||||||||| Sbjct 84013 AATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATTCCCTCCTTGTCTTGG 84072 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || || | ||||||||||| || | ||| ||||| | |||||| |||||| Sbjct 84073 ATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAACTTCTAAAGTGATGGTCTTA 84132 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||||||||||||||| || ||||| Sbjct 84133 CCGGTCAAAGTCTTAACGAAGATTTGCAT 84161 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| || || ||| || ||||||||||||||||| | | || | ||| || || Sbjct 84181 ACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCGTCTTCC 84240 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || || |||||||| | ||| |||||| ||||| ||||||||||||||| Sbjct 84241 AATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATTCCCTCCTTGTCTTGG 84300 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || || | ||||||||||| || | ||| ||||| | |||||| |||||| Sbjct 84301 ATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAACTTCTAAAGTGATGGTCTTA 84360 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||||||||||||||| || ||||| Sbjct 84361 CCGGTCAAAGTCTTAACGAAGATTTGCAT 84389 Score = 152 bits (168), Expect = 1e-31 Identities = 151/193 (78%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||| || || ||||||||||||| |||| || | || || || | ||| || || || | Sbjct 84654 TTCCTTCTGAATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATTGCTTACCAGCGA 84712 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 ||||||| | ||| |||||| || || |||||||||||||||||||| | || || Sbjct 84713 AGATCAATCTTTGCTGGTCAGGTGGGATTCCCTCCTTGTCTTGGATCTTGGACTTAACAT 84772 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 | || || ||||| |||| ||| ||||| | |||||| |||||||| ||||||||||||| Sbjct 84773 TGTCAATTGTGTCGGAAGATTCAACTTCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAA 84832 Query 283087 CGAATATCTGCAT 283099 |||| || ||||| Sbjct 84833 CGAAAATTTGCAT 84845 Score = 149 bits (164), Expect = 1e-30 Identities = 161/211 (76%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949 |||| || || ||| || ||||||||||||||||| | |||| || | || || || Sbjct 84865 ACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAG-GTTCTACCGTCTTC 84923 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 | ||| || || ||||| ||||| | ||| |||||| ||||| |||||||| ||||| Sbjct 84924 CAATTGCTTACCAGCAAAAATCAATCTTTGCTGGTCAGGAGGAATTCCCTCCTTATCTTG 84983 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 |||||| | || ||| | ||||||||||| |||| ||| ||||| | ||||| ||||| Sbjct 84984 GATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGATTCAACTTCCAATGTGATGGTCTT 85043 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || ||||| || ||||| || || |||||| Sbjct 85044 GCCGGTCAAGGTTTTAACAAAGATTTGCATT 85074 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| || || ||| || ||||||||||||||||| | | || | ||| || || Sbjct 84409 ACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCGTCTTCC 84468 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || || |||||||| | ||| ||||| ||||| || ||||||||||| Sbjct 84469 AATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGA 84528 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || || | ||| ||| | || || ||||| |||| || ||||| | |||||| |||||| Sbjct 84529 ATTTTAGATTTAACGTTGTCAATGGTGTCAGAAGACTCAACTTCTAAAGTGATGGTCTTA 84588 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||||||||||||||| || ||||| Sbjct 84589 CCGGTCAAAGTCTTAACGAAGATTTGCAT 84617 >seq1 Length=1779567 Score = 165 bits (182), Expect = 2e-35 Identities = 154/193 (80%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||| ||||||||||||||||| | |||| || | ||| ||||| | ||| || ||||||| Sbjct 999669 TTCCTTTTGGATGTTGTAGTCGGACAAG-GTTCTGCCGTCCTCCAATTGCTTACCGGCAA 999611 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 ||||||| | ||| |||||| |||||||| ||||||||||||||||| | || || Sbjct 999610 AGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTAACAT 999551 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 | ||||| ||||| || | |||||| || | || || |||||||| ||||||||||||| Sbjct 999550 TGTCGATGGTGTCAGAGGATTCGACCTCCAAGGTAATGGTCTTACCTGTCAAAGTCTTAA 999491 Query 283087 CGAATATCTGCAT 283099 | || || ||||| Sbjct 999490 CAAAGATTTGCAT 999478 >seq5 Length=724248 Score = 98.7 bits (108), Expect = 2e-15 Identities = 180/260 (69%), Gaps = 8/260 (3%) Strand=Plus/Plus Query 316947 AATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGC 317006 || ||||||||| | ||| || | | || | ||||| | ||| ||||| || || | Sbjct 181557 AACGAAGTCAACAACAGAGGTCTCGGCGTCAGTACCGTCAATGTCGTGCTCGACGTAAAC 181616 Query 317007 AGTTTTCAGAATATCCTTC-GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCA 317065 ||| | | | | ||| | ||||| ||||| | || ||||| |||| || |||| Sbjct 181617 GGTTCT-ACATTCGTCTTGAGATGGGAAACCTTCGACTTGGCCGTTGGCAATAGCTCTCA 181675 Query 317066 TCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGA---TTTCCCTTCT 317122 ||| || ||||| |||||||| || || || || | ||| || | |||| ||| Sbjct 181676 TCAAGGTAGACTTACCAGCACCGTTAGGACCACACAAACCGTATCTTCTGTTTC---TCT 181732 Query 317123 TCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCAC 317182 ||| | || | || ||||||| | |||||| |||| || |||| ||||||||||| Sbjct 181733 TCAATCTGAATTGAGTCTTGTTCAACAAGATCTTAGCACCGTAAGCCAAAGAGAACTCAC 181792 Query 317183 AATCACACAGGTCCTCGCCG 317202 | | ||||| |||||| ||| Sbjct 181793 AGTTACACAAGTCCTCTCCG 181812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738489198662