Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq10 104 2e-17 >seq10 Length=432243 Score = 104 bits (114), Expect = 2e-17 Identities = 558/879 (63%), Gaps = 27/879 (3%) Strand=Plus/Plus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTT-TCGAAAAAATTTGTCTTACCCT 23263 ||| ||||| || || || ||| ||| | |||| |||||||| || ||||| || Sbjct 412329 CATGACACCAGCCTTCTGGTAGTCCGAAACTC-TCTTCTCGAAAAAGTTGGTCTTTCCTG 412387 Query 23264 CTAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATG 23323 | || || || || |||||||| || ||||| || | ||| || || ||| | || Sbjct 412388 CCAAGGAAATGTTCTCCATAAAGTCGAATGGGTTGGTGACATTGTAAAC--CTT--CTTG 412443 Query 23324 ATA----ATTCCTTTAAAAGC---CTATCTGCTACAAATTCAATATATTGACACATCAAA 23376 || | || | |||| ||||| || || || || | ||||| |||||||| Sbjct 412444 TTACCCAAGGCC---ACAAGCAATCTATCGGCAACGAACTCGACGTATTGGCACATCAAG 412500 Query 23377 TCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATG 23436 ||| |||| || || | | || |||| | ||||| ||| || ||||||||| Sbjct 412501 TCACAGTTCATTCCCAACAAGCTTGCTGGCAAGGCATCGGTAAAGTATTCTTTTTCAATA 412560 Query 23437 GAAACAGCATCTTTAATTATTTGA---ACAATAACTTCTTCACTAGGTGGATATTTTAAA 23493 | || || || |||| || | || ||| || | | ||| | || || Sbjct 412561 GTGACGGCCTCAGTAATAATCTTCTCCACGATAGCTGGGT---TTGGTCTGTTGTTCAAG 412617 Query 23494 TACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCA 23553 | ||||| || || ||||| ||| || | ||||| || || | ||||||||| Sbjct 412618 TGAGAGAACAACAAGCAGGCAAAGTCAGTGTGCAAACCTTCGTCTCTGCAAATCAATTCG 412677 Query 23554 TTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAAT 23613 || || || || | || ||||| || |||| || || | ||| || || | ||||| Sbjct 412678 TTGGAGAACGTAAGACCAGGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAAC 412737 Query 23614 GATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTT 23673 || || || ||||||||||| || ||||| ||||||||||| | | | |||| Sbjct 412738 GAGCCAGAGAAGAAAATACCTTCGACAGCAGCAAAGGCCACCAATCTTTCGGCAAACAAG 412797 Query 23674 GCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATT 23733 || | | || | |||||| | | ||| | |||||| || | || || Sbjct 412798 GCCTCGTCGTCTGCGATCCATCTCAAGGCCCACTCGGCCTTCTTCTTAATGCAAGGGATG 412857 Query 23734 GTTTCAATTGCTTTTAAGAGAAAAGT-TTTTTCTTCATTATCTGTTATATATGTATCAAT 23792 |||| || || || || | |||||| |||| | ||| | || || | || || Sbjct 412858 TTTTCGATAGCGTTGAACA-AAAAGTCAGCCTCTTTAGGGTCTTTGATGTAGGAGTCGAT 412916 Query 23793 TAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACA 23852 | ||| || |||| || || || ||||| || ||||| || || || ||||| Sbjct 412917 CAACAAAGAGTAGGTTTCCGAGTGGATGTTTTCCATCATGATCTGGAATCCGTAGAAACA 412976 Query 23853 TCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAAT 23912 | | || || | | || || ||| | |||| | | | || || || || ||||| Sbjct 412977 TTTGGCCTCTGGGATCTGGACCTCAGCAGAAAAGTTCTCCACCAAGTTCTCATTGACAAT 413036 Query 23913 ACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT--AAAATGTCT-TTCATCAGT 23969 || || ||||||||||||||| | || || | ||| ||| | ||||| Sbjct 413037 TCCGTCCGAAGCAGCAAAGAAAGCCAACACTCTGGAGATGAAGAATCTCTCGTTGTCAGT 413096 Query 23970 TGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 | || ||||| || || || ||||| || || |||| ||| || | ||||| || Sbjct 413097 CATTCTGTTCTTCCAGTCGTTGATGTCTTTCGACAAGTCAATTTCTTCCGCAGTCCAGAA 413156 Query 24030 ACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATT 24068 | ||| ||| || |||||| ||||||| || || Sbjct 413157 AGATGCTTCGGCCTTTTTGTACATTTGCCAAATCTCGTT 413195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487654514200