Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq1 141 7e-29
seq14 127 1e-24
>seq1
Length=1779567
Score = 141 bits (156), Expect = 7e-29
Identities = 172/230 (75%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169
|| ||||||| ||||||||||| ||| | || ||||||||||||||||| |||| |
Sbjct 999704 CCACCTCTCAATCTCAACACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGAC 999645
Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
|| | || |||| |||| ||||| |||||||||||||| | ||||| || | ||
Sbjct 999644 AAGGTTCTGC-CGTCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCAGGTGG 999586
Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCC 44287
| ||||||||| || ||||| ||| || ||| | |||||||| | ||||||
Sbjct 999585 AATACCTTCCTTGTCTTGGATCTTGGACTTAACATTGT--CGATGGTGTCAGAGGATTCG 999528
Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| ||||| ||||| || || | ||||| || |||||||||||
Sbjct 999527 ACCTCCAAGGTAATGGTCTTACCTGTCAAAGTCTTAACAAAGATTTGCAT 999478
>seq14
Length=288459
Score = 127 bits (140), Expect = 1e-24
Identities = 176/241 (73%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||||||||| ||| | ||| ||||||||||||||||||
Sbjct 84840 TTGCATACCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTA 84899
Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
|||| | || | | |||| |||| ||||| || ||||| ||||| | ||||| |
Sbjct 84900 GTCGGACAAGGTTCTAC-CGTCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGCTGGT 84958
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCG 44281
| | ||| | || ||||| || ||||| ||| || ||| | || |||||||
Sbjct 84959 CAGGAGGAATTCCCTCCTTATCTTGGATCTTGGACTT-AACGTTGTCGATAGTGTCGGAA 85017
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
||||| || |||| || || ||||| || || | ||| || || ||||||||||| |||
Sbjct 85018 GATTCAACTTCCAATGTGATGGTCTTGCCGGTCAAGGTTTTAACAAAGATTTGCATTATG 85077
Query 44342 T 44342
|
Sbjct 85078 T 85078
Score = 123 bits (136), Expect = 2e-23
Identities = 172/236 (73%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||||||||| ||| | ||| ||||||||||||||||||
Sbjct 84384 TTGCATACCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTA 84443
Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
|||| | | | || |||| |||| ||||| || || |||||||| | ||||| |
Sbjct 84444 GTCGGACAAAGTTCTGC-CGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGT 84502
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCG 44281
||| ||| | |||||||| | | | | || | || || ||| | |||||||| |
Sbjct 84503 CTGGAGGAATTCCTTCCTTGT-CTTGAATTTTAGATTTAACGTTGTCAATGGTGTCAGAA 84561
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || || | || || ||||| || || | ||||| ||||||||||||||
Sbjct 84562 GACTCAACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84617
Score = 118 bits (130), Expect = 8e-22
Identities = 171/237 (72%), Gaps = 6/237 (3%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||||||||| ||| | ||| ||||||||||||||||||
Sbjct 84156 TTGCATACCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTA 84215
Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
|||| | | | || |||| |||| ||||| || || |||||||| | ||||| |
Sbjct 84216 GTCGGACAAAGTTCTGC-CGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGT 84274
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGC 44280
| | || | || ||||| || ||||| ||| || ||| | || |||||||
Sbjct 84275 CAGGTGGAATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGT--CGATAGTGTCGGA 84332
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || || | || || ||||| || || | ||||| ||||||||||||||
Sbjct 84333 CGATTCAACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84389
Score = 100 bits (110), Expect = 2e-16
Identities = 164/232 (71%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168
|||| ||||||| ||||||||||| ||| | ||| ||||| || |||||||| ||||
Sbjct 83933 TTCCACCTCTCAATCTCAACACCAAGTGCAAAGTGGATTCCTTCTGAATGTTGTAGTCGG 83992
Query 44169 -CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227
| | | || | || |||| ||||| || || |||||||| | ||||| || |
Sbjct 83993 ACAAAGTTCTGC-CATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGT 84051
Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATT 44285
|| | || ||||| || ||||| ||| || ||| | || ||||||| ||||
Sbjct 84052 GGAATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGT--CGATAGTGTCGGACGATT 84109
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || | || || ||||| || || | ||||| ||||||||||||||
Sbjct 84110 CAACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990167468701
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |