Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 1e-24
seq14 114 3e-20
>seq1
Length=1779567
Score = 129 bits (142), Expect = 1e-24
Identities = 162/220 (74%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || ||| | ||||| || || || ||| | ||||| ||| ||| |||
Sbjct 999481 CAAATCTTTGTTAAGACTTTGACAGGTAAGACCATTACCTTGGAGGTCGAATCCTCTGAC 999540
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||||| || ||||| ||||| || || || |||||||||
Sbjct 999541 ACCATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAGCAA 999600
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | ||||| ||||| || || | || || || || || |||| |||| || ||| |
Sbjct 999601 AGATTGATCTTTGCCGGTAAGCAATTGGAGGACGGCAGAAC-CTTGTCCGACTACAACAT 999659
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||| ||||| || |||| | || |||||| | |||
Sbjct 999660 CCAAAAGGAATCTACCTTGCACTTGGTGTTGAGATTGAGA 999699
>seq14
Length=288459
Score = 114 bits (126), Expect = 3e-20
Identities = 159/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||| | || || || || ||||| | || || ||| || |||
Sbjct 84842 CAAATTTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCCGAC 84783
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || ||||| || ||||| || |||||||| || |||||||||
Sbjct 84782 ACAATTGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATCCCACCTGACCAGCAA 84723
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | |||||||| || || || | ||||| || || || |||| | || || ||| |
Sbjct 84722 AGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAAC-CTTGTCTGACTACAACAT 84664
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || ||||| || |||| | ||||||||| | |||
Sbjct 84663 TCAGAAGGAATCTACCTTGCACTTGGTTTTGAGATTGAGA 84624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730382591282
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |