Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1 129 1e-24 seq14 114 3e-20 >seq1 Length=1779567 Score = 129 bits (142), Expect = 1e-24 Identities = 162/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||| | ||||| || || || ||| | ||||| ||| ||| ||| Sbjct 999481 CAAATCTTTGTTAAGACTTTGACAGGTAAGACCATTACCTTGGAGGTCGAATCCTCTGAC 999540 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| Sbjct 999541 ACCATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAGCAA 999600 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||| ||||| || || | || || || || || |||| |||| || ||| | Sbjct 999601 AGATTGATCTTTGCCGGTAAGCAATTGGAGGACGGCAGAAC-CTTGTCCGACTACAACAT 999659 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||| ||||| || |||| | || |||||| | ||| Sbjct 999660 CCAAAAGGAATCTACCTTGCACTTGGTGTTGAGATTGAGA 999699 >seq14 Length=288459 Score = 114 bits (126), Expect = 3e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||| | || || || || ||||| | || || ||| || ||| Sbjct 84842 CAAATTTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCCGAC 84783 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||| || ||||| || |||||||| || ||||||||| Sbjct 84782 ACAATTGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATCCCACCTGACCAGCAA 84723 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | |||||||| || || || | ||||| || || || |||| | || || ||| | Sbjct 84722 AGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAAC-CTTGTCTGACTACAACAT 84664 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || ||||| || |||| | ||||||||| | ||| Sbjct 84663 TCAGAAGGAATCTACCTTGCACTTGGTTTTGAGATTGAGA 84624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730382591282