Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq7 127 1e-24 >seq7 Length=431226 Score = 127 bits (140), Expect = 1e-24 Identities = 400/613 (65%), Gaps = 34/613 (6%) Strand=Plus/Plus Query 101678 TTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCT 101737 ||||||||||||| ||||| || | |||||||| || | || || |||||||| Sbjct 261714 TTAAGAGCATCAACATGATCACTGTACACATGAGCATCACCAAGTGTGTGAATAAACTCA 261773 Query 101738 CCAGGCACTAGATTAGTG----ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGC 101793 ||| || | || || || || |||||||| || || |||| || || Sbjct 261774 CCA--CAGTCCAT--GTCCACCACTTGTGCAATCATCTTTGTCAAGAGAGCGTATGAGGC 261829 Query 101794 AATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAG 101853 |||||||||||| || || | ||||||||| |||||| ||||| ||| ||| || || Sbjct 261830 AATGTTAAATGGAACACCGAGACCCATATCACATGATCTCTGATAGAGTAAACAAGATAG 261889 Query 101854 CTTT---------CCATC---------ACAGACATAAAATTGACTTAATACATGACAAGG 101895 | | ||||| | |||||| |||||| || |||||||| || Sbjct 261890 TTGTGGCTTACCACCATCCTTTGGGAAATTGACATAGAATTGAGAAAAAACATGACATGG 261949 Query 101896 CGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATC 101955 || || |||| || || | ||||| ||||||||||| ||| | || |||||||| Sbjct 261950 TGGTAATGCCATCTTTGGGAAGTCTGGTGGATTCCAAGCACTCATAATGATTCTTCTATC 262009 Query 101956 TGTA-GGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTT 102014 ||| |||||||| || | ||| |||| | | ||| ||||| || | || Sbjct 262010 -GTATGGGTTTGTCTTCAACTTATGGATCACTTCAGCGAGTTGATCAACACCCTGACCCG 262068 Query 102015 TATAATCGCGCCCAACA-CCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATAC 102073 |||| || || ||| |||| || || || || || || ||||| || || ||||| Sbjct 262069 TATAGTC-AGCATCACAGTCTTTGTACTCAGCACCAAAGTGTCTCCATTGGAAACCATAA 262127 Query 102074 ACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTA 102133 || || || | ||| |||||| | || || ||||| |||| | || ||| Sbjct 262128 ACTGGACCTAAATCACCTTCACGACGATCGGTTAATCCAAGACTATCAAGGTATTCTCTT 262187 Query 102134 GATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGAT 102193 |||||||| | |||||||| | || || | | |||| || | ||||| | Sbjct 262188 GATCCATTACCTTCCCAAATCTTTACTCCTTGTTCACTGAGCTTCTTACCATCAGTGCAG 262247 Query 102194 CCTCTGATAAACCACAACAGTTCTTCAACA--ACACCTCTCCAAAATACTCTCTTAGTAG 102251 || ||||||||||| ||||| ||| | | ||| | || || ||||||| | Sbjct 262248 CCGGCAATAAACCACAATAGTTC--CAAGATGATACCCTTAGTGAAGACCTTCTTAGTCG 262305 Query 102252 TTAAAAGTGGAAA 102264 |||| ||||| || Sbjct 262306 TTAACAGTGGGAA 262318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251147167012