Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq6 268 1e-66 seq5 170 2e-37 >seq6 Length=1133955 Score = 268 bits (296), Expect = 1e-66 Identities = 1205/1889 (64%), Gaps = 44/1889 (2%) Strand=Plus/Plus Query 52804 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 52862 |||| ||||| ||||| | ||| || || | | || | | ||||||||| || || | Sbjct 477784 CAATAGTGAACTGAATAGCAGCAGAAGCAGCCTGGGTTCTCAAATAGTACATACCAGTCT 477843 Query 52863 TTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTG 52922 | | ||| |||| ||||| || |||||| || | || | | ||| || Sbjct 477844 TCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTTACCCATAGTTGGAGCTC 477903 Query 52923 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 52982 || || || |||| ||||||| |||||| ||||| || | | || |||||||| | Sbjct 477904 TAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAGCACGATCAGCAGCCATAT 477963 Query 52983 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 53041 ||||| |||||||| | ||| ||||||| || || || || || | ||| ||| | Sbjct 477964 CGATGATAGTCTTTTGAGAAATCTCCCAAACGGTCTTGTACAAATCTTTCAATTCCTT-T 478022 Query 53042 GGAAGGTTTG-TA--TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCA 53098 |||| ||||| || || |||||||| || ||| || || | |||| || Sbjct 478023 GGAATGTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGATGATGTGACTCTTCATAGAG 478082 Query 53099 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 53158 |||| ||| | || ||| | | ||| | || || ||||| | || ||| Sbjct 478083 TCATCCCAAACACCCAAATCAACCAAATCACGAAGCAAATATGGGTTAACAATCTGGAAT 478142 Query 53159 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTA 53218 || |||| | || | |||| |||||| ||| || || ||||| | | | || || Sbjct 478143 TCACCAGCAAGGACACGACGAGAGTAAATGTTAGAAGTGTATGGTTCGAAACATTCGTTG 478202 Query 53219 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 53278 | ||||| ||||||| ||| || ||||| ||||| || || || | ||| ||||| Sbjct 478203 TAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTGGAGCAACAAGCAAAGAGTTTCTC 478262 Query 53279 AGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG--TA 53336 | |||||| | || | | | || |||| ||||||| ||| | ||| || || | Sbjct 478263 AAACCGTACTTGACAATATCAGCCTTAAGAGTATCCCAATCCCACAAATCGGAAGGCTTT 478322 Query 53337 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 53396 | | || || ||| ||| || || ||| ||| | Sbjct 478323 CTTCCCCAAAGGTCAAAC--TGAAGCTGACCCTTAGAAGCTGGGGAACCTTGGAATGATT 478380 Query 53397 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 53456 ||||||| ||||| || || || ||| | | ||| || ||| ||| |||||||| Sbjct 478381 CGTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACTCCAAAGCAGCGTGATAAATGG 478440 Query 53457 TTTCGAAGATCTTCTTATTTAGATCTTGTGC--TTCCAGGCTATCAAATGGATAATTTAA 53514 | |||||||||| | || | || | || || ||| | ||||||| || || Sbjct 478441 TCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGATT--CAAATGGCAAACGCAA 478498 Query 53515 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 53574 | ||||| || || ||||| ||||||||||| | | || ||||| | |||| |||| Sbjct 478499 AATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTGGTCTGTTTCTCATATT 478558 Query 53575 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTT--- 53631 ||| || ||||||||| | || || || ||| || || ||| | || | ||| Sbjct 478559 GGAGTTTCTAGCTTCTGGGACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTCTT 478618 Query 53632 TCTGACAA--TT---ACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGT-CCATC 53685 | |||||| || | ||||| | | |||| | | || | | || ||||| Sbjct 478619 TGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAGTCTGAGTGGTACCATC 478678 Query 53686 TA------TTACAAACAT-GTT--CAATGCAATAGATGCCAGATTACAAACGGCTACCTC 53736 | || ||| | | | ||||||||| || |||| |||||||| || || || Sbjct 478679 AAGGGATTTTTCAATGAAAGCTGGCAATGCAATGGAGGCCAAGTTACAAACAGCAACTTC 478738 Query 53737 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 53796 | | || | |||| | |||||| || | ||| | ||||||| | || || Sbjct 478739 TTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAGAAGACTTGATCATACCCAA 478798 Query 53797 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGT 53856 || | || ||| |||| | |||||| |||||||| ||||| |||||||| |||||||| Sbjct 478799 GTTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAAGCATGAATGGAGTACCAGT 478858 Query 53857 TTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTA 53916 ||| |||||| || | || || | ||| | ||||||| | | ||| || Sbjct 478859 CTCAGTCTGGGCATCAAGGATTGCATACCACAACTTTTGAGCCTTGACAGTC--TTTCTA 478916 Query 53917 TCTCTTTTCTCTTTCGTATAGTGT--ATACA-ATCGTTCAAACTCGTCTCCCCAAACATT 53973 | | |||||| ||| | ||| | | | || || || || || || || | Sbjct 478917 CCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTTGAAT-TCATCACCATAA-CAGT 478974 Query 53974 GTCCAAT-CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTC 54032 ||| || || ||||| ||| | | ||| | ||| || || | | | || | Sbjct 478975 CAGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCATTCACCATTAGATTCAACAC 479034 Query 54033 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCT 54092 ||| ||| || | |||||| ||||| | ||| || | ||| | | ||| || | Sbjct 479035 GTTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTGATCTCTT 479094 Query 54093 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 54152 | || || ||||||| ||| |||| ||| | | ||||| | ||||| ||||||| Sbjct 479095 CTTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCATGGTTCCA 479154 Query 54153 AGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 54212 | || | || | | ||||| | ||||| || || || || | ||| | ||| |||| Sbjct 479155 AATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGT 479214 Query 54213 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 54272 | ||| | || | | ||||||||| | ||| || || | ||| || || || | || | Sbjct 479215 TGTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCAGCAATGT 479274 Query 54273 AGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGA 54332 | || | || | || ||| || || ||| || || || || | || |||| Sbjct 479275 AAGAGCCTGTAGCTCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTCTTGGAGA 479334 Query 54333 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 54392 | || || ||| |||| || || |||||||| ||||| || ||| || |||| | Sbjct 479335 TCAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTCATAGCCA 479394 Query 54393 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 54452 || ||||| ||||| || | | || || || || || || || ||||||| Sbjct 479395 CAAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTTGGAGAAG 479454 Query 54453 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCC 54512 |||| || || || | ||||| | || || || ||||| ||| |||| | ||||| | Sbjct 479455 CGTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGTCTCAATAACTGATTTAATATCTC 479514 Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572 ||| || || | ||||| | ||| | || ||||| || | |||| ||| || Sbjct 479515 TACCATGGATACCGATAGCGACTCTCATGATCAAATGCTGTGGACGTTCAGCGACTTTAC 479574 Query 54573 TGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 54630 || | || |||||| ||| | ||||| || || |||||||| ||||| || ||| Sbjct 479575 CATTAACACGCAACAAGTAAGATCTCTCCAATGTCTTGAAACCAAAGTAGTTATAGTTGA 479634 Query 54631 AAAGTCTCGTTCGTAAATAATAACTGAGT 54659 || |||| ||||| || || | |||| Sbjct 479635 AA--TCTCTATCGTAGATGATGGCAGAGT 479661 >seq5 Length=1593029 Score = 170 bits (188), Expect = 2e-37 Identities = 406/608 (67%), Gaps = 12/608 (2%) Strand=Plus/Plus Query 24117 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT 24176 ||||| ||||| |||||| || || || ||| | ||| || || | | ||| || Sbjct 293530 AAATGAGCAAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAAC 293589 Query 24177 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 24236 || || || || || | || ||||| | || | ||| || | ||| || || || ||| Sbjct 293590 TCATTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCA 293649 Query 24237 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAA 24296 || || ||||| ||||| || ||||| || || |||||||||| |||||| || || | Sbjct 293650 AAGGAACCAGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAAC 293709 Query 24297 CCGGCGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 24353 ||| |||| ||||| | ||||||||| |||||||| || | ||| || Sbjct 293710 AAGGCTTCTTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGA 293769 Query 24354 ATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCA 24413 || ||||| || |||||||| | ||| | | | ||| || | ||| || ||| Sbjct 293770 ATAGTCTCAATGGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCA 293829 Query 24414 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAA 24473 ||||| ||| || | || || |||||||| || || ||||| || ||||||||| Sbjct 293830 ATCAAGAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAA 293889 Query 24474 CATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCT--GCTAAATTTTCATTCA 24531 || |||| || | ||| || || || | | || ||||| | || || ||||| | Sbjct 293890 CACTTAGCTTCTGGAATTTGCACCTCGGCAGAGAA--GTTCTCAACCAAGTTCTCATTAA 293947 Query 24532 CTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT-AAAATATTTTTCGTCT 24590 | || |||||| || ||||| || || | ||| | || || | | || ||| Sbjct 293948 CGATACCGTCAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCT 294007 Query 24591 GGTGTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTC 24647 | | | | || |||||||||| | ||| ||||| | ||| | || || | ||| Sbjct 294008 CAT-TCAATCTGTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTC 294066 Query 24648 CAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAA 24707 || || || || || ||||| || || | |||||| ||||| || | ||||| ||| Sbjct 294067 CAGAAAGAAGCTTCAGCCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAAA 294126 Query 24708 ATAACAAA 24715 | |||||| Sbjct 294127 AGAACAAA 294134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721510941760