Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq5 168 7e-37
seq1 116 4e-21
seq4 100 3e-16
seq7 96.9 4e-15
>seq5
Length=1593029
Score = 168 bits (186), Expect = 7e-37
Identities = 409/615 (67%), Gaps = 11/615 (2%)
Strand=Plus/Minus
Query 116591 GAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGC--GCATGT 116648
|||||| ||||| || || ||||||| || | |||| || || |||| ||||
Sbjct 294149 GAGAACAAGCGCCGTTTTGTTCTTTTCCCAATCAAGTACCATGAGATCTGGCAGGCAT-- 294092
Query 116649 ACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGA 116708
|||| ||||| || || || |||||||||| |||||| | || |||| ||||| |
Sbjct 294091 ACAAGAAGGCTGAAGCTTCTTTCTGGACCGCTGAGGAGATTGATTTGTCTAAGGATTTGC 294032
Query 116709 GCGACTGGGAGCGC---TTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCT 116765
|| ||| | | ||||| || || || || |||||| | || || ||||
Sbjct 294031 ATGATTGGAACAACAGATTGAATGAGAATGAACGTTTCTTCATCTCTCGTGTTCTTGCCT 293972
Query 116766 TTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGG 116825
| || ||||| ||||| ||||| || ||||| |||| ||| ||| || ||||
Sbjct 293971 TCTTTGCCGCTTCTGACGGTATCGTTAATGAGAACTTGGTTGAGAACTTCTCTGCCGAGG 293912
Query 116826 TGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACT 116885
|||| | | || || ||| |||||||| || || ||| ||||||||| | ||||
Sbjct 293911 TGCAAATTCCAGAAGCTAAGTGTTTCTACGGTTTCCAAATCATGATGGAGAACATTCACT 293852
Query 116886 CGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGT- 116944
| || | || || | | || ||||| || | | | | || ||| ||
Sbjct 293851 CTGAGACATACTCTCTCTTGATTGACACTTATATCAAGGATCCACAACAG--GCTGAGTA 293794
Query 116945 -TTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCG 117003
||||| || ||||| ||||| || || || | || ||||||| || ||||| || |
Sbjct 293793 TTTGTTTAATGCCATTGAGACTATTCCATGTATTAAGAAGAAGGCTGATTGGGCTTTGAG 293734
Query 117004 CTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGA 117063
||||| |||| ||| ||| ||||| ||| | || || ||||| || || || ||
Sbjct 293733 ATGGATTGCCGATGAAGAAGCCTTGTTCGGTGAGAGACTTGTTGCCTTTGCCGCTGTTGA 293674
Query 117064 GGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCAT 117123
|| ||||||| || || || ||| | || || ||| | ||||| | || | ||
Sbjct 293673 AGGTATCTTCTTCTCTGGTTCCTTTGCCTCTATTTTCTGGTTGAAGAAGAGAGGTTTGAT 293614
Query 117124 GCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTT 117183
||| || |||||||| || ||| | || | | | || || ||| |||| |||||
Sbjct 293613 GCCAGGTTTGACTTTCTCTAATGAGTTGATTTGCCGTGATGAAGGTTTGCACACTGACTT 293554
Query 117184 TGCCTGTTTGCTGTT 117198
|||||||||| ||||
Sbjct 293553 TGCCTGTTTGTTGTT 293539
>seq1
Length=3147266
Score = 116 bits (128), Expect = 4e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || | || || || || || || | || || || | ||
Sbjct 843016 ATGCAAATTTTCGTGAAGACCTTGACCGGTAAGACTATTACACTTGAGGTTGAGTCTTCC 843075
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| || |||| ||||| ||||| ||||| | |||||
Sbjct 843076 GACACCATTGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGACCA 843134
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| |||| |||| ||| || || ||||| || || | | |||||| |||||||||
Sbjct 843135 GCAGAGACTTATCTTCGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAA 843194
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||||||| |||| || || | || ||| | ||||| || ||
Sbjct 843195 CATCCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 843242
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || | || || || || || || |||| || || || ||
Sbjct 843244 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAGTCCTCC 843303
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | |||| | ||| || || | ||||| ||||| ||||| | |||||
Sbjct 843304 GATACTATTGACAACGTT-AAGTCTAAGATCCAGGACAAGGAGGGTATCCCACCTGACCA 843362
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| |||| |||| || || || ||||| || || | | |||||| |||||||||
Sbjct 843363 GCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGATGGTAGAACCCTCTCCGACTACAA 843422
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||| ||||||||| | || || || | || ||| | ||||| || ||
Sbjct 843423 CATTCAGAAGGAGTCAACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 843470
Score = 84.2 bits (92), Expect = 2e-11
Identities = 113/156 (72%), Gaps = 1/156 (1%)
Strand=Plus/Plus
Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820
|||| ||||| || |||| ||||| ||||| ||||| | || ||||| |||| ||
Sbjct 842860 AACG-TCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCGCCTGATCAGCAGAGACTTAT 842918
Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880
|| || || || ||||| || || | | ||||| |||||||||||| ||||||||
Sbjct 842919 CTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCCGACTACAACATTCAGAAGGA 842978
Query 40881 GGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
| |||| || || | || ||| | ||||| || ||
Sbjct 842979 GTCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 843014
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || || || || || || |||| || ||| || |
Sbjct 843472 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAATCCTCT 843531
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | ||| || |||| ||||| || || || || | |||||
Sbjct 843532 GACACTATTGACAACGTT-AAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCA 843590
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| |||| |||| || || || ||||| || || | | ||| | |||||||||
Sbjct 843591 GCAGAGACTTATCTTTGCTGGTAAGCAGCTTGAGGATGGTAGAACCTTGTCCGACTACAA 843650
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||| ||||||||| |||| || || | |||||| | ||||| || ||
Sbjct 843651 CATTCAGAAGGAGTCCACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 843698
>seq4
Length=1873953
Score = 100 bits (110), Expect = 3e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || | || || || ||||| ||| | || || || || | |||| | |
Sbjct 1428223 TTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGACACCATT 1428282
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | ||||| ||||| ||||| | |||||||| ||||
Sbjct 1428283 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAGAGACT 1428341
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| || || ||||| || |||| | ||||| |||||||||||||||||
Sbjct 1428342 TATCTTCGCCGGTAAGCAGCTCGAGGACGGTAGAACCCTTTCTGACTACAACATCCAGAA 1428401
Query 40878 GGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||| |||| ||||| | || | | ||||| || ||
Sbjct 1428402 GGAGTCCACTTTGCATTTGGTCCTCAGATTGAGAGGTGG 1428440
>seq7
Length=431226
Score = 96.9 bits (106), Expect = 4e-15
Identities = 161/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || || || || || |||||||| || |||||||| | || || || |
Sbjct 274915 AAGATGCAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCT 274974
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| | | | ||||| || || | |||||||| || ||||| | |||
Sbjct 274975 TCCGACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGAC 275034
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| |||| |||| || || || ||||| || || | | ||||| ||||||
Sbjct 275035 CAGCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTAC 275094
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGG 40919
||||| ||||||||| |||| || || | ||| | | ||||| || || ||
Sbjct 275095 AACATTCAGAAGGAGTCCACCCTTCACTTGGTGCTCAGATTGAGAGGTGGTGG 275147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219122717120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |