Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq7 98.7 2e-15 >seq7 Length=431226 Score = 98.7 bits (108), Expect = 2e-15 Identities = 276/424 (65%), Gaps = 15/424 (4%) Strand=Plus/Plus Query 205450 TGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACCTAAACCC 205509 ||||||||||| | ||||| | | || |||| |||||||| ||||| | |||| Sbjct 261795 TGTGCAATCATCTTTGTCAAGAGAGCGTATGAGGCAATGTTAAATGGAACACCGAGACCC 261854 Query 205510 ATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATTA----------TT--- 205556 |||||| |||||| ||||| | | ||| | || | | ||| || Sbjct 261855 ATATCACATGATCTCTGATAGAGTAAACAAGATAGTTGTGGCTTACCACCATCCTTTGGG 261914 Query 205557 -AATT-ACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCT 205614 |||| |||| ||||| |||| |||||| ||||||| |||| ||| | ||| Sbjct 261915 AAATTGACATAGAATTGAGAAAAAACATGACATGGTGGTAATGCCATCTTTGGGAAGTCT 261974 Query 205615 ATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttattt 205674 |||||||| || | | || || ||||| | || || | || | |||| Sbjct 261975 GGTGGATTCCAAGCACTCATAATGATTCTTCTATCGTATGGGTTTGTCTTCAACTTATGG 262034 Query 205675 atAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATAT 205734 || | | | | |||||||| || ||| ||||| | | ||| || | || Sbjct 262035 ATCACTTCAGCGAGTTGATCAACACCCTGACCCGTATAGTCAGCATCACAGTCTTTGTAC 262094 Query 205735 TTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTA 205794 | ||||||||| || | |||||| ||||||||||||||||||||||||||||| | | Sbjct 262095 TCAGCACCAAAGTGTCTCCATTGGAAACCATAAACTGGACCTAAATCACCTTCACGACGA 262154 Query 205795 TCATTAAAACCACGtttttttATATATTTTAATGATCCATTTTCATCCCAAATATGGATT 205854 || | || ||| | | | | |||| | ||||||||| | |||||||| | | | Sbjct 262155 TCGGTTAATCCAAGACTATCAAGGTATTCTCTTGATCCATTACCTTCCCAAATCTTTACT 262214 Query 205855 CCTT 205858 |||| Sbjct 262215 CCTT 262218 Score = 84.2 bits (92), Expect = 3e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || || || || || ||| | ||| |||| | Sbjct 274918 ATGCAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCTTCC 274977 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || || || || ||||||||||| |||||||| || Sbjct 274978 GACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGACCAG 275037 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || ||||| ||||| || || || | |||||| || |||| | || || || Sbjct 275038 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTACAAC 275097 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 ||||| || || || || | || ||||| | | || |||||||| ||| || Sbjct 275098 ATTCAGAAGGAGTCCACCCTTCACTTGGTGCTCAGATTGAGAGGTGGTGGTAAGAA 275153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455886681600