Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1 114 1e-20 >seq1 Length=3147266 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 118521 AATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGC 118580 ||||||||||||||||| | || ||||| || ||||||||||| ||| || || | Sbjct 843689 AATCTCAACACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAAGGTTCTA 843630 Query 118581 GTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCC 118640 |||||| ||||| || ||||| |||| || | |||||| || || || || || ||| Sbjct 843629 CCATCCTCAAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGGAATACCTTCC 843570 Query 118641 TTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTC 118700 |||||| ||| || ||||| | || | ||||| | | || ||||||| || Sbjct 843569 TTGTCTTGAATCTTAGACTTAACGTTGTCAATAGTGTCAGAGGATTCAACCTCGAGTGTA 843510 Query 118701 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || || |||| || || ||||| |||||||| Sbjct 843509 ATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 843472 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||||| |||||||| | || ||||| || || |||||||| ||| Sbjct 843244 TACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGG 843185 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | || | ||| |||||||| || || ||| |||| || | |||||| || || | Sbjct 843184 AGAGGGTTCTGCCATCTTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTG 843125 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||||||||| ||| || || || | || | |||||| | ||| | Sbjct 843124 GGATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCAA 843065 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || || ||||||| || || || ||||| ||||| Sbjct 843064 CCTCAAGTGTAATAGTCTTACCGGTCAAGGTCTTCACGAAAATTTGCAT 843016 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||||| |||||||| | || ||||| || ||||||||||| ||| Sbjct 843472 TACCACCTCTCAATCTCAAAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCGG 843413 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | || | ||| || ||||| || || || |||| || | |||||| || || | Sbjct 843412 AGAGGGTTCTACCATCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTG 843353 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||||||||| || || ||||| | || | || || | | ||| | Sbjct 843352 GGATACCCTCCTTGTCCTGGATCTTAGACTTAACGTTGTCAATAGTATCGGAGGACTCAA 843293 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || | || || || |||| || || || ||||| ||||| Sbjct 843292 CCTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 843244 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||||| |||||||| | || ||||| || ||||||||||| ||| Sbjct 843016 TACCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGG 842957 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | || | |||||| ||||| || || || |||| || | ||||||||| || | Sbjct 842956 AAAGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCAGGCG 842897 Query 118630 GTATGCCCTCCTTGTC 118645 | || ||||||||||| Sbjct 842896 GGATACCCTCCTTGTC 842881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830336552304