Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq5 161 9e-35 >seq5 Length=1593029 Score = 161 bits (178), Expect = 9e-35 Identities = 373/560 (67%), Gaps = 13/560 (2%) Strand=Plus/Plus Query 16225 AAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGA 16284 ||||| | ||| ||||| ||| ||||| ||||| || | | || ||||| || || Sbjct 293538 AAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGA 293597 Query 16285 AAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACC 16344 || || | ||||||||| | |||| || || | ||| || |||| |||||| ||||| Sbjct 293598 GAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACC 293657 Query 16345 AGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtt 16404 ||| ||||| ||||||||||| |||||||| ||||| | || ||||||| || | Sbjct 293658 AGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAGGCTTC 293717 Query 16405 tttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTC 16464 || | | |||||| | |||||||| || || | |||| ||| || |||| Sbjct 293718 TTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTC 293777 Query 16465 TATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAA 16524 || |||||||| ||||| | | || ||| |||||||| || || | | Sbjct 293778 AATGGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCAATCAAGAG 293837 Query 16525 ACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGC 16584 | || | || || ||||| |||||||| || || ||||| || || || |||| Sbjct 293838 AGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAACACTTAGC 293897 Query 16585 TTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATC 16644 ||| | ||||| || || | | || | || | ||||| || ||||| || || || Sbjct 293898 TTCTGGAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACGATACCGTC 293957 Query 16645 GCTAGCTGCAAAAAACGCAAGTA----TGTGTTTAATAAAAttt--ttttCGTT--ATCT 16696 ||| ||||| || ||||| | | | | || ||| || || || || |||| Sbjct 293958 AGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCTCATTCAATCT 294017 Query 16697 GAAAGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAA 16756 | || ||| ||| ||||| || || ||||| | ||| || | ||||| ||| Sbjct 294018 G-----TTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCCAGAAA 294072 Query 16757 GAAGCAACAGCCTTTTTATA 16776 ||||| ||||||| || || Sbjct 294073 GAAGCTTCAGCCTTCTTGTA 294092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511930623200