Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq5 150 2e-31 >seq5 Length=1593029 Score = 150 bits (166), Expect = 2e-31 Identities = 547/844 (65%), Gaps = 19/844 (2%) Strand=Plus/Plus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 |||||||| ||| |||||| || |||||||||||||| ||||| ||| || || || Sbjct 293257 TTTTGATAATCAGAAACTCTCTTCTCAAAGAAGTTAGTCTTACCAGCCAAGGAAATGTTC 293316 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGT 14032 |||||||| || ||||| || | | | | || | ||| || | | || Sbjct 293317 TCCATAAAGTCGAATGGGTTAGAAACGTTGTAGAACTTCTTGTTACCAAGGGCAATAAGA 293376 Query 14033 AATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 14092 | | ||| ||| ||||| || |||||| ||| | | |||||||| | | Sbjct 293377 AGACGATCAGCACAGAACTGAACGTATTGAACCATAAGCTTGGCGTTCATACCGAGCAAA 293436 Query 14093 TTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATA 14152 | |||| || ||| || | || ||| || ||||| || | ||||| Sbjct 293437 GAAGCTGGAAGAGCATCGGTAAAGTACTCAGATTCAATCTCAACAGCTTCAGTAATAATC 293496 Query 14153 ATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAA 14212 || | ||| ||| ||| || | || | ||| ||| | ||||| ||||| Sbjct 293497 TTCTCCACAATCTCAGAAGATGGCTTGTTCTTCAAATGAGCAAACAACAAACAGGCAAAG 293556 Query 14213 TCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATC 14272 ||| || | || ||||| | | ||| | || || || || || || ||||||||| Sbjct 293557 TCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAAGTCAAACCTGGCATC 293616 Query 14273 AATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCA 14332 || |||| || || ||||| || || | || || || || || ||||| || || ||| Sbjct 293617 AAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACCAGAGAAGAAGATACCTTCA 293676 Query 14333 ACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTT 14392 || || ||||| || | | || || || ||| | |||| || | | |||||| | Sbjct 293677 ACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAGGCTTCTTCATCGGCAATCCATCTC 293736 Query 14393 CTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGT 14452 |||||| |||| || || |||||| | || || ||||| |||||||| |||| Sbjct 293737 AAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTCAATGGCATTAAACAAATAC 293796 Query 14453 TCCTTCTCTTTAG--TACTTGAAATGTATGTATCAAT-AAGTAAGCTATACATTTCAGAG 14509 || || || | | |||| || || || ||||| ||| || || | |||||| Sbjct 293797 TCAGCCTGTTGTGGATCCTTG--ATATAAGTGTCAATCAAGAGAG-AGTATGTCTCAGAG 293853 Query 14510 TGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACC 14569 || ||||| ||||| || || ||||| || ||||| ||||||||| ||| ||| Sbjct 293854 TGAATGTTCTCCATCATGATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGCACC 293913 Query 14570 TCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAAT 14629 || | | || | || |||| || |||||||| ||||| ||| ||| ||||| || Sbjct 293914 TCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACGATACCGTCAGAAGCGGCAAAGAAG 293973 Query 14630 GCCA----ATATGTTTTTAATAAA-GT--ATTGCTC-TTCATTGCTGAGTTTTTTCCAAT 14681 || | | | | || ||| || ||| ||| |||| | ||| || ||||||| Sbjct 293974 GCAAGAACACGAGAGATGAAGAAACGTTCATT-CTCATTCAAT-CTG---TTGTTCCAAT 294028 Query 14682 CGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTT 14741 | ||||||||||| | ||| | || ||| | ||||| ||| ||| |||| || | Sbjct 294029 CATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCCAGAAAGAAGCTTCAGCCTTCT 294088 Query 14742 TATA 14745 | || Sbjct 294089 TGTA 294092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345527648160