Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq5 150 2e-31
>seq5
Length=1593029
Score = 150 bits (166), Expect = 2e-31
Identities = 547/844 (65%), Gaps = 19/844 (2%)
Strand=Plus/Plus
Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972
|||||||| ||| |||||| || |||||||||||||| ||||| ||| || || ||
Sbjct 293257 TTTTGATAATCAGAAACTCTCTTCTCAAAGAAGTTAGTCTTACCAGCCAAGGAAATGTTC 293316
Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGT 14032
|||||||| || ||||| || | | | | || | ||| || | | ||
Sbjct 293317 TCCATAAAGTCGAATGGGTTAGAAACGTTGTAGAACTTCTTGTTACCAAGGGCAATAAGA 293376
Query 14033 AATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 14092
| | ||| ||| ||||| || |||||| ||| | | |||||||| | |
Sbjct 293377 AGACGATCAGCACAGAACTGAACGTATTGAACCATAAGCTTGGCGTTCATACCGAGCAAA 293436
Query 14093 TTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATA 14152
| |||| || ||| || | || ||| || ||||| || | |||||
Sbjct 293437 GAAGCTGGAAGAGCATCGGTAAAGTACTCAGATTCAATCTCAACAGCTTCAGTAATAATC 293496
Query 14153 ATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAA 14212
|| | ||| ||| ||| || | || | ||| ||| | ||||| |||||
Sbjct 293497 TTCTCCACAATCTCAGAAGATGGCTTGTTCTTCAAATGAGCAAACAACAAACAGGCAAAG 293556
Query 14213 TCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATC 14272
||| || | || ||||| | | ||| | || || || || || || |||||||||
Sbjct 293557 TCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAAGTCAAACCTGGCATC 293616
Query 14273 AATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCA 14332
|| |||| || || ||||| || || | || || || || || ||||| || || |||
Sbjct 293617 AAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACCAGAGAAGAAGATACCTTCA 293676
Query 14333 ACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTT 14392
|| || ||||| || | | || || || ||| | |||| || | | |||||| |
Sbjct 293677 ACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAGGCTTCTTCATCGGCAATCCATCTC 293736
Query 14393 CTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGT 14452
|||||| |||| || || |||||| | || || ||||| |||||||| ||||
Sbjct 293737 AAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTCAATGGCATTAAACAAATAC 293796
Query 14453 TCCTTCTCTTTAG--TACTTGAAATGTATGTATCAAT-AAGTAAGCTATACATTTCAGAG 14509
|| || || | | |||| || || || ||||| ||| || || | ||||||
Sbjct 293797 TCAGCCTGTTGTGGATCCTTG--ATATAAGTGTCAATCAAGAGAG-AGTATGTCTCAGAG 293853
Query 14510 TGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACC 14569
|| ||||| ||||| || || ||||| || ||||| ||||||||| ||| |||
Sbjct 293854 TGAATGTTCTCCATCATGATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGCACC 293913
Query 14570 TCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAAT 14629
|| | | || | || |||| || |||||||| ||||| ||| ||| ||||| ||
Sbjct 293914 TCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACGATACCGTCAGAAGCGGCAAAGAAG 293973
Query 14630 GCCA----ATATGTTTTTAATAAA-GT--ATTGCTC-TTCATTGCTGAGTTTTTTCCAAT 14681
|| | | | | || ||| || ||| ||| |||| | ||| || |||||||
Sbjct 293974 GCAAGAACACGAGAGATGAAGAAACGTTCATT-CTCATTCAAT-CTG---TTGTTCCAAT 294028
Query 14682 CGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTT 14741
| ||||||||||| | ||| | || ||| | ||||| ||| ||| |||| || |
Sbjct 294029 CATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCCAGAAAGAAGCTTCAGCCTTCT 294088
Query 14742 TATA 14745
| ||
Sbjct 294089 TGTA 294092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345527648160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |