Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq6 244 9e-60
seq5 132 4e-26
seq1 93.3 4e-14
>seq6
Length=1133955
Score = 244 bits (270), Expect = 9e-60
Identities = 1107/1737 (64%), Gaps = 44/1737 (3%)
Strand=Plus/Plus
Query 22153 ATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTT 22212
||| ||||| || ||||||| |||| ||||||| |||| || || || || ||||| ||
Sbjct 477827 ATAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTT 477886
Query 22213 TCCATAACTCGGCAAGTCCA-TGTACACATTGAACGACTGACTCTGATCGATAAACGCTC 22271
|| | | || | || | ||| | || || || ||| ||||| || || ||
Sbjct 477887 ACCCATAGTTGG-AGCTCTAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAG 477945
Query 22272 CTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACA 22331
| ||||| || ||||||| || | || || || ||||| |||||||||||||
Sbjct 477946 CACGATCAGCAGCCATATCGATGATAGTCTTTTGAGAAATCTCCCAAACGGTCTTGTACA 478005
Query 22332 GTTGCCTGATCTCTAACGGTATCGATTCG-ATCCTCTGGACGGACCCGTTATTGTGTATG 22390
| | | || || || | || | | | || | || ||||||| |||
Sbjct 478006 AATCTTTCAATTCCTTTGGAAT-GTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGATG 478064
Query 22391 ATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGA 22450
|| | | || || | || | ||| | ||| | | |||||| | || ||
Sbjct 478065 ATGTGACTCTTCATAGAGTCATCCCAAACACCCAAATCAACCAAATCACGAAGCAAATAT 478124
Query 22451 CGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAAC 22510
|||| || | || || || || | | ||| || || ||||||||| || ||| |
Sbjct 478125 GGGTTAACAATCTGGAATTCACCAGCAAGGACACGACGAGAGTAAATGTTAGAAGTGTAT 478184
Query 22511 GGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCC 22570
||||||||| |||| |||| |||| || |||| ||||| || || ||||| || ||
Sbjct 478185 GGTTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTGGAGCA 478244
Query 22571 AACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTT--GAGCATCGACCAGT 22628
| || | ||||||||||| |||| ||| ||| | | ||| ||| ||| ||| |
Sbjct 478245 ACAAGCAAAGAGTTTCTCAAACCGTACTTGACAATATCAGCCTTAAGAGTATC--CCAAT 478302
Query 22629 CCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCG 22688
|||||| |||||| ||| | | |||| | || | || | | || | |
Sbjct 478303 CCCACAAATCGGAAGGCTTTC---TTCCCCAAAGGTCAAACTGAAGCTGACCCTTAGAAG 478359
Query 22689 CCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCT 22748
| ||| |||| | | | |||||| ||||| | | ||| || || | ||
Sbjct 478360 CTGGGGAACCTTGGAATGATTCGTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACT 478419
Query 22749 CCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGC 22808
|||| || ||| ||| || ||||||||||| | |||||||||| || |
Sbjct 478420 CCAAAGCAGCGTGATAAATGGTCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAG 478479
Query 22809 TTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGA 22868
||| | |||| ||||| |||| || || || || | ||| ||||| || | | |
Sbjct 478480 ATTCAAATGGCAAACGCAAAATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAA 478539
Query 22869 TCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGA 22928
| |||| |||| ||| ||| || | | || || || | || || | || || |
Sbjct 478540 TTGGTCTGTTTCTCATATTGGAGTTTCTAGCTTCTGGGACTGGGTAGTAGTTACGGTCAA 478599
Query 22929 TTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGT 22988
| ||||||||||||| | || |||| || | || ||||||| |
Sbjct 478600 TGATTCTGTTCAAGTTCTTTGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTAT 478659
Query 22989 AAACGCCCGATTG-TACAA-CAA---ACTTGTTGACG------------GCGATCGAGGC 23031
|| | | || || ||| | ||| | || | | | || || |||||
Sbjct 478660 AA--GTCTGAGTGGTACCATCAAGGGATTTTTCAATGAAAGCTGGCAATGCAATGGAGGC 478717
Query 23032 AAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATT 23091
| || || || || || || ||| | | ||| || ||||| || ||| | ||
Sbjct 478718 CAAGTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTT 478777
Query 23092 GCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTT-TCGATTGCACGAATCCTTGT 23150
| |||| ||| | ||||| || ||||||| | || ||| || || | ||||||||
Sbjct 478778 AGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCG-TTACAGGCATCCTTGT 478836
Query 23151 AGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCT 23210
| |||||| | || || || ||||| ||| | || | ||| || ||||| | |
Sbjct 478837 AAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATACCACAACTTTT 478896
Query 23211 GAGCGTGAACACGTCGCACGTACCTG--CCTTCTTCCTCGTACTTTTGGTACAACGCGTC 23268
|||| | ||| ||| | |||| ||||||| ||| ||||| | || | || |
Sbjct 478897 GAGCCTTGACA-GTCTTTC-TACCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTT 478954
Query 23269 AAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCA 23328
||||| |||| |||||||| || || || || | || | ||| | | | | ||||
Sbjct 478955 GAATTCATCACCATAACAGTCAGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCA 479014
Query 23329 CATTGAGTCATT---TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385
|| | |||| |||||| ||| ||| || | ||| || ||||| | || |||
Sbjct 479015 --TTCAC-CATTAGATTCAACACGTTCCATGAACAAATCAGGGATCCACAATGCTGGGAA 479071
Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445
|| || || || | | ||| ||||| ||| |||||| | | || | || || ||
Sbjct 479072 CAAATCACGAGCTCTGATCTCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAATCAAA 479131
Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505
| || || ||||| || || | |||| |||||| || || |||||||| || || ||
Sbjct 479132 GATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACC 479191
Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565
|| ||||||||||| || |||||||| | || | | ||| || | | |||||| ||
Sbjct 479192 TTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACCGTTAGA 479251
Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625
| ||| || || | || ||| | |||| |||||| || | ||| |||||
Sbjct 479252 AGTACCGTTAGTACCAGCAATGTAAGAGCCTGTAGCTCTAACGTTATGGATGTGTAAACC 479311
Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685
|| || || | | || || |||| || |||||||||| ||| || ||||| |||||
Sbjct 479312 GATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAGATACCCTC 479371
Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGC 23745
|||| || ||| | | || || | |||||| || ||||| || | | || ||| |
Sbjct 479372 GATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACC 479431
Query 23746 GGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGT 23805
|| ||||| || || ||||| || ||||||| | ||||| || || || ||
Sbjct 479432 AGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGT 479491
Query 23806 GTCGATGGCGGCATCAATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATCA 23861
|| || | | | ||| | |||| || || |||||||| ||||| | ||| ||||
Sbjct 479492 CTCAATAACTGATTTAATAT-CTCTACCATGGATACCGATAGCGACTCTCATGATCA 479547
>seq5
Length=1593029
Score = 132 bits (146), Expect = 4e-26
Identities = 315/471 (67%), Gaps = 4/471 (1%)
Strand=Plus/Plus
Query 23097 ACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCA 23156
|||| || || |||||||| |||| || || |||| ||| || | |||||| |||||||
Sbjct 214029 ACTTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAGCA 214088
Query 23157 TGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGT 23216
|| | || || || || || || ||||| | ||| | |||| | ||||||| |
Sbjct 214089 TGAAAGGACCACCAGTTTCAACTTGAGACTCCAAGATTGAGTGCCATAACTTCTGAGCCT 214148
Query 23217 GAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCG 23275
|| | || | || ||||| | ||| || || || |||| ||||| |
Sbjct 214149 TAAT-CTTCTTCTTTGCCAATCCTTCCTTCTCATATTTGTGATACAGTTGAACAAATGCA 214207
Query 23276 GCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATGAGACTCCACATTGA 23334
|||| || || || || || | | |||| |||| | | | ||| |
Sbjct 214208 TCACCATACATCTCATTCAAACCAGGAGCAT-CATCTGGACTAAACAAGCACCATTCTTC 214266
Query 23335 GTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCG 23394
|| || ||||| | ||| || ||||| || ||||||||||| ||||||| || ||
Sbjct 214267 ATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGCATAGAACAAATCACG 214326
Query 23395 GGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGC 23454
|| | || ||| || || || ||||| | || | || || |||| ||| || ||
Sbjct 214327 AGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAATCCATCACATCAGC 214386
Query 23455 ATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGAC 23514
|||||| || || | || | |||||| || || ||||||||||| || || ||||| ||
Sbjct 214387 ATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGATCAAC 214446
Query 23515 GTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565
|| | || ||||| || ||||||| ||||| || |||| |||||| ||
Sbjct 214447 ATATCTTGCAGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGA 214497
>seq1
Length=3147266
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| |||| || || || || || |||| ||||| | |||
Sbjct 843244 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAGTCCTCC 843303
Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | | | || |||| | | | || || ||||||||| || | || || |||||
Sbjct 843304 GATACTATTGACAACGTTAAGTCTAAG-ATCCAGGACAAGGAGGGTATCCCACCTGACCA 843362
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | || || || || || || ||| | ||||| || || | ||| || ||
Sbjct 843363 GCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGATGGTAGAACCCTCTCCGACTACAA 843422
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||| || || || || ||||| |||| | ||| |||| || ||||
Sbjct 843423 CATTCAGAAGGAGTCAACCCTTCACTTGGTTTTGAGATTGAGAGGTGGTA 843472
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| |||| || || || || || |||| |||||| | ||
Sbjct 843472 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAATCCTCT 843531
Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | | || |||| | | | ||| | | |||||||||| | || || |||||
Sbjct 843532 GACACTATTGACAACGTTAAGTCTAAGATTCAAG-ACAAGGAAGGTATTCCACCTGACCA 843590
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | || || || ||||| || ||| | || || || || || ||| || ||
Sbjct 843591 GCAGAGACTTATCTTTGCTGGTAAGCAGCTTGAGGATGGTAGAACCTTGTCCGACTACAA 843650
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|||||| || || || |||||||| |||| | ||| |||| || |||
Sbjct 843651 CATTCAGAAGGAGTCCACTCTTCACTTGGTGTTGAGATTGAGAGGTGGT 843699
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| |||| || || || || || | || ||||| | |||
Sbjct 843016 ATGCAAATTTTCGTGAAGACCTTGACCGGTAAGACTATTACACTTGAGGTTGAGTCTTCC 843075
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| | || ||||||||| || | || || ||||||
Sbjct 843076 GACACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGACCAG 843135
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | || || ||||| || || ||| | ||||| | || | ||| || |||
Sbjct 843136 CAGAGACTTATCTTCGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAAC 843195
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || || |||||||| |||| | ||| |||| || ||||
Sbjct 843196 ATCCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGTA 843244
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766333135040
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