Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq5 104 5e-17 seq6 98.7 2e-15 >seq5 Length=1593029 Score = 104 bits (114), Expect = 5e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 ||||||||||||| || |||||||| |||||||| |||| | || || || ||||||| Sbjct 293695 TTGTTGCCTTTGCCGCTGTTGAAGGTATCTTCTTCTCTGGTTCCTTTGCCTCTATTTTCT 293636 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || | ||||| || ||| | |||| ||| | || | ||| |||||||| |||| | | Sbjct 293635 GGTTGAAGAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCTAATGAGTTGATTTGCCGTG 293576 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 | |||||| | || |||||||| || || |||| Sbjct 293575 ATGAAGGTTTGCACACTGACTTTGCCTGTTTGTTGTT 293539 >seq6 Length=1133955 Score = 98.7 bits (108), Expect = 2e-15 Identities = 187/270 (69%), Gaps = 4/270 (1%) Strand=Plus/Plus Query 94773 ATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGT 94832 ||| | ||| | |||| || ||||| ||||||||||| | || | || | ||| Sbjct 479297 ATGGATGTGTAAACCGATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGT 479356 Query 94833 ATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG 94892 ||||| |||||||| ||| ||| ||| | ||| |||||| || ||||| | || Sbjct 479357 CTCATAGATACCCTCGATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTG 479416 Query 94893 -GGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTC- 94950 ||||||| || ||| || |||| || || ||||| ||||| || || | ||| Sbjct 479417 TGGGTGTG-GGGTACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAAGTA-TCTCTCA 479474 Query 94951 GACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCC 95010 |||||||| | ||| || ||||| || ||||| || ||| || || || |||| ||| Sbjct 479475 GACATGAGGTTATAAGTCTCAATAACTGATTTAATATCTCTACCATGGATACCGATAGCG 479534 Query 95011 ACACGCATAATCATGTCCTGAGGGCGCTCA 95040 || | ||| |||| | ||| || || ||| Sbjct 479535 ACTCTCATGATCAAATGCTGTGGACGTTCA 479564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583847851460