Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq6 271 1e-67
seq5 188 9e-43
>seq6
Length=1133955
Score = 271 bits (300), Expect = 1e-67
Identities = 1319/2073 (64%), Gaps = 44/2073 (2%)
Strand=Plus/Plus
Query 62042 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 62100
|||| ||||| ||||| | ||| || || | | || | | ||||||||| || || |
Sbjct 477784 CAATAGTGAACTGAATAGCAGCAGAAGCAGCCTGGGTTCTCAAATAGTACATACCAGTCT 477843
Query 62101 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 62160
| | ||| |||| ||||| || |||||| || | || | | ||| ||
Sbjct 477844 TCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTTACCCATAGTTGGAGCTC 477903
Query 62161 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 62220
|| || || |||| ||||||| |||||| ||||| || | | || |||||||| |
Sbjct 477904 TAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAGCACGATCAGCAGCCATAT 477963
Query 62221 TTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 62279
||||| |||||||| | ||| ||||||| || || || || || | ||| ||| |
Sbjct 477964 CGATGATAGTCTTTTGAGAAATCTCCCAAACGGTCTTGTACAAATCTTTCAATTCCTT-T 478022
Query 62280 GGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCA 62336
|||| ||||| || || ||||| || || ||| || || | |||| ||
Sbjct 478023 GGAATGTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGATGATGTGACTCTTCATAGAG 478082
Query 62337 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAAT 62396
|||| ||| | || ||| | | ||| | || |||||||| | ||||||
Sbjct 478083 TCATCCCAAACACCCAAATCAACCAAATCACGAAGCAAATATGGGTTAACAATCTGGAAT 478142
Query 62397 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTA 62456
|| |||| | || | |||| |||||| ||| || || ||||| | | || ||
Sbjct 478143 TCACCAGCAAGGACACGACGAGAGTAAATGTTAGAAGTGTATGGTTCGAAACATTCGTTG 478202
Query 62457 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 62516
| ||||| ||||||| ||| || ||||| ||||| || || || | ||| |||||
Sbjct 478203 TAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTGGAGCAACAAGCAAAGAGTTTCTC 478262
Query 62517 AGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGG--TA 62574
| |||||| | || | | | || ||| ||||||| ||| | ||| || || |
Sbjct 478263 AAACCGTACTTGACAATATCAGCCTTAAGAGTATCCCAATCCCACAAATCGGAAGGCTTT 478322
Query 62575 CAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 62634
| | | | || || ||| ||| || || ||| ||| |
Sbjct 478323 CTTC--CCCAAAGGTCAAACTGAAGCTGACCCTTAGAAGCTGGGGAACCTTGGAATGATT 478380
Query 62635 CATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGG 62694
| ||||| ||||| || || || | | | | ||| || ||| ||| ||||||||
Sbjct 478381 CGTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACTCCAAAGCAGCGTGATAAATGG 478440
Query 62695 TTTCAAAGATCTTCTTATTTAGATCTTGTGC-TTCCGGGCTATCAAATGGATAATTTAAG 62753
| || ||||||| | || | || | || || | | |||||||| || ||
Sbjct 478441 TCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGAT-TCAAATGGCAAACGCAAA 478499
Query 62754 AGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62813
| ||||| || || ||||| ||||||||||| | | || ||||| | |||| ||||
Sbjct 478500 ATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTGGTCTGTTTCTCATATTG 478559
Query 62814 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT---T 62870
||| || ||||||||| | || || || ||| || || ||| | || | || |
Sbjct 478560 GAGTTTCTAGCTTCTGGGACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTCTTT 478619
Query 62871 CTGACAA--TT---ACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC-CCATCT 62924
|||||| || | ||||| | | |||| | | || | | | |||||
Sbjct 478620 GTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAGTCTGAGTGGTACCATCA 478679
Query 62925 A------TTACAAACAT-GTT--CAATGCAACAGATGCCAGATTACACACGGCTACCTCA 62975
| || ||| | | | |||||||| || |||| ||||| || || || ||
Sbjct 478680 AGGGATTTTTCAATGAAAGCTGGCAATGCAATGGAGGCCAAGTTACAAACAGCAACTTCT 478739
Query 62976 TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAA 63035
| | || | |||| | |||||| || | ||| | ||||||| | || ||
Sbjct 478740 TCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAGAAGACTTGATCATACCCAAG 478799
Query 63036 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 63095
|| | || ||| |||| | |||||| |||||||| ||||| |||||||||||||||||
Sbjct 478800 TTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAAGCATGAATGGAGTACCAGTC 478859
Query 63096 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTAT 63155
||| |||| | || | || || | ||| | | ||||||| | | ||| ||
Sbjct 478860 TCAGTCTGGGCATCAAGGATTGCATACCACAACTTTTGAGCCTTGACAGTC--TTTCTAC 478917
Query 63156 CTC--CTTTCTCTTTCGTATAGAGTATACA-ATCGTTCGAACTCGTCTCCCCAAACATTG 63212
| | | |||| | || || ||| | | | || ||| || || || || || |
Sbjct 478918 CACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTT-GAATTCATCACCATAA-CAGTC 478975
Query 63213 TCCAAT-CTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 63271
||| | || ||||| ||| | | ||| | ||| || || | | | || ||
Sbjct 478976 AGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCATTCACCATTAGATTCAACACG 479035
Query 63272 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTC 63331
|| ||| || | |||||| ||||| | ||| || | ||| | | ||| || ||
Sbjct 479036 TTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTGATCTCTTC 479095
Query 63332 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 63391
|| || ||||||| ||| |||| ||| | | ||||| | ||||| ||||||||
Sbjct 479096 TTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCATGGTTCCAA 479155
Query 63392 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 63451
|| | ||| | | ||||| | ||||| || || || || | ||| | ||| |||||
Sbjct 479156 ATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTT 479215
Query 63452 ATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATA 63511
||| | || | | ||||||||| | |||||| || |||| || ||||| | || ||
Sbjct 479216 GTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCAGCAATGTA 479275
Query 63512 GCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 63571
|| | || | || ||| || || ||| || || || || | || |||||
Sbjct 479276 AGAGCCTGTAGCTCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTCTTGGAGAT 479335
Query 63572 TAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAG 63631
|| || ||| |||| || || |||||||| || || ||| ||| || |||| |
Sbjct 479336 CAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTCATAGCCAC 479395
Query 63632 TAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63691
|| ||||| ||||| || | | | || || || || || || || ||||||||
Sbjct 479396 AAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTTGGAGAAGC 479455
Query 63692 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 63751
||| || || || | ||||| | || || || ||||||||| |||| | ||||| |
Sbjct 479456 GTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGTCTCAATAACTGATTTAATATCTCT 479515
Query 63752 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTT 63811
||| || || | ||||| | ||| | || ||||| || | |||| | | |||
Sbjct 479516 ACCATGGATACCGATAGCGACTCTCATGATCAAATGCTGTGGACGTTCAGCGACTTTACC 479575
Query 63812 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAA 63869
|| | ||||||||| ||| | ||||| || || |||||||| ||||| || ||||
Sbjct 479576 ATTAACACGCAACAAGTAAGATCTCTCCAATGTCTTGAAACCAAAGTAGTTATAGTTGAA 479635
Query 63870 AAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCC 63929
| |||| ||||| || || | || | | || || || | | | ||| || | |
Sbjct 479636 A--TCTCTATCGTAGATGATGGCAGAGTCCAACTCGTCTTTGAACTCTTGAACAATGT-C 479692
Query 63930 ATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAA 63988
|| | ||| || | ||||||||||| | | || || |||| |||||| |
Sbjct 479693 ATAAGTTTCCTTAGACAACATCGGAGAATGGAGATCGGTCTTTGGGTTAATGTAGTTGTA 479752
Query 63989 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGC 64048
| || || | || | || |||| | |||| ||| || | ||| || |||||
Sbjct 479753 AAGCTCTTCGACAACAGAAGAGAACTGTTTAGTGGTTTGCTTATGCAAATTAGAGATGGC 479812
Query 64049 TATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081
||||| || |||| | | ||||| || |||||
Sbjct 479813 AATTCTAGCAGCTAAAGTAGCATAGTCTGGATG 479845
>seq5
Length=1593029
Score = 188 bits (208), Expect = 9e-43
Identities = 410/608 (67%), Gaps = 12/608 (2%)
Strand=Plus/Plus
Query 33564 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAAT 33623
||||| ||||| |||||| || || || ||||| ||| || || | | ||| ||
Sbjct 293530 AAATGAGCAAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAAC 293589
Query 33624 TCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33683
|| ||||| || || | || ||||| | || | ||| || | ||| || || || ||
Sbjct 293590 TCATTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCA 293649
Query 33684 AATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA 33743
|| || || || |||||||| ||||| || || |||||||||| ||||||||| || |
Sbjct 293650 AAGGAACCAGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAAC 293709
Query 33744 CCGGCGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 33800
||| |||| ||||| | ||||||||| |||||||| || | ||| ||
Sbjct 293710 AAGGCTTCTTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGA 293769
Query 33801 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCG 33860
|| || || ||||||||||| | ||| | | | ||| || | |||||| ||
Sbjct 293770 ATAGTCTCAATGGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCA 293829
Query 33861 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 33920
||||| ||| || | || || |||||||| || || || || || |||||||||
Sbjct 293830 ATCAAGAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAA 293889
Query 33921 CATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCA 33978
|| |||| || | ||| ||||| || | | | || ||||| | || || ||||| |
Sbjct 293890 CACTTAGCTTCTGGAATTTGCACCTCGGCAGAGAA--GTTCTCAACCAAGTTCTCATTAA 293947
Query 33979 CTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTAT-AAAATATTTTTCGTCT 34037
| || || ||| || ||||| || || | ||| | || || | | || |||
Sbjct 293948 CGATACCGTCAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCT 294007
Query 34038 GGTGTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTC 34094
| | | | || |||||||||| | ||| ||||| | ||| | || || | |||
Sbjct 294008 CAT-TCAATCTGTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTC 294066
Query 34095 CAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAA 34154
|| || || || || ||||| || || | |||||| ||||| || | ||||||||||
Sbjct 294067 CAGAAAGAAGCTTCAGCCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAAA 294126
Query 34155 ATAACAAA 34162
| ||||||
Sbjct 294127 AGAACAAA 294134
Score = 176 bits (194), Expect = 6e-39
Identities = 646/991 (65%), Gaps = 38/991 (4%)
Strand=Plus/Plus
Query 62679 GCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCA 62738
||||| | ||| |||||||||||||||| || || || | | || | ||||| |||
Sbjct 213671 GCACCATGATACATGGTTTCAAAGATCTCTTTGTTAAGTTTGCGAGCCTGAGGGCTGTCA 213730
Query 62739 AATGGATAATTTAAGAGA-ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGG 62797
||||| ||| | | || || || ||| || | ||||||||| |||||| | || ||
Sbjct 213731 AATGGCAAATGGA-GTGACATGAATAAGTCAGCAAGTCCTTGAACTCCAATAGCAATTGG 213789
Query 62798 TCTATGTCTC---TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTAT 62854
| ||| || ||| | || || || ||||| | || || | || ||| ||
Sbjct 213790 ACGGTGTTTCAAGTTACTTGAC---TCCGCCTCTGGTGTTGGGTAGATACCAACATCGAT 213846
Query 62855 AATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC-AA 62913
|| || || ||||| || | ||||||||| ||| | |||||| || ||| ||
Sbjct 213847 AACCTTGTTCAGATTCTTGGTCAATACTTTGACGACAGAGTGTAGTTTGTGATGATCGAA 213906
Query 62914 ATC--GCCCAT-----------CTA--TTACAAACATGTTCAATG--CAACAGATGCCAG 62956
| | | ||| || || ||| | ||| | | ||||||| ||||
Sbjct 213907 AACAAGTTCATTATCAACTTCACTTCGTTTCAAGAAAGTTGGAAGAGCAACAGAGGCCAA 213966
Query 62957 ATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACT 63016
||||| ||||| ||| | || | ||||| | | ||| || | ||
Sbjct 213967 GTTACAAACGGCAGTCTCTTCAGGTGATGAGTATTGAACCACTTCACAACACAAGTTCGA 214026
Query 63017 ACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAG 63076
||||||| || || ||||| | |||||||||||| | ||||| ||||||||||| ||
Sbjct 214027 GGACTTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAG 214086
Query 63077 AATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAG 63135
||||| ||| ||||||||||| ||||| || | || | | ||| | | || |||
Sbjct 214087 CATGAAAGGACCACCAGTTTCAACTTGAGACTCCAAGATTGAGTGCCATAACTTCT-GAG 214145
Query 63136 CCTTTATTATAGA-TTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAAC 63194
|||| || | |||| ||||| || | || ||| ||||| | | | ||
Sbjct 214146 CCTTAATCTTCTTCTTTGCCAATCCTTCCT-TCTCATATTTGTGATACAGTTGAACAAAT 214204
Query 63195 TCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCT 63254
| || || | | | | ||| | |||| ||||| |||| | ||| |||| |||
Sbjct 214205 GCATCACCATACATCTCATTCAAACCAGGAGCATCATCTGGACTAAACAAGCACCATTCT 214264
Query 63255 CCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATC 63313
| || | || ||| || ||| || ||||| || ||||| ||||| ||| || | |||
Sbjct 214265 TCATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGC-ATAGAACAAATC 214323
Query 63314 TCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTT-TTAAGATCGAGGAACGCCATAATAT 63372
| | ||| || || ||||| |||||| ||||| | || || |||| | ||
Sbjct 214324 ACGAGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAAT-CCATCACAT 214382
Query 63373 CAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGAT 63432
||| |||||| |||||||| || ||||| | | || || | || || || || ||||
Sbjct 214383 CAGCATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGAT 214442
Query 63433 CTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATAC 63492
| | ||||| || ||||||||| | ||||| | ||| || | ||||||||||| |||
Sbjct 214443 CAACATATCTTGCAGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGAAGTAC 214502
Query 63493 CATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTC 63552
|||| | |||| || || | ||| ||| | ||| ||| || |||||| || |
Sbjct 214503 CATTTGATCCGGCAATGTATGCACCAGTGGATCTAATGTTAGATATATGTAGACCGATAC 214562
Query 63553 CCCCTGCCATTTTAGAGATTAATGCGCA-TCGT-TTTAACGTGTCATAGATGCCTTCTAT 63610
| || || || ||||||| | ||| || | | || || | ||| ||||| || ||
Sbjct 214563 CACCAGCAGCCTTCGAGATTA--GAGCAGTCTTGTGCAAAGTCTTATATATGCCATCGAT 214620
Query 63611 GCTATCATCGATCATGTTAAGTAGAAAACAG 63641
| ||||| || |||||| ||||||
Sbjct 214621 GGAGTCATCTTCTATTCCAAGTAGGAAACAG 214651
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817505527360
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