Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq5 172 5e-38
seq6 136 4e-27
>seq5
Length=1593029
Score = 172 bits (190), Expect = 5e-38
Identities = 462/693 (67%), Gaps = 34/693 (5%)
Strand=Plus/Plus
Query 37774 ATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATAC 37833
||||| |||||||| | ||||| ||| ||||||||| ||| ||||| || || |
Sbjct 214034 ATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAGCATGAAA 214093
Query 37834 GGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACG 37893
|| || ||| | ||||| ||| | || || | |||||| ||||| |
Sbjct 214094 GGACCACCAGTTTCAACTTGAGACTCCAAGATTGAGTGCCATAA-CTTCT---------G 214143
Query 37894 ATCGCTTTAAtttttttCTTTGTT--TCGTA--TTCT-ATAT-----ATA-ATTTGTTAA 37942
| || ||||| || ||||||| || | |||| |||| ||| | ||| |
Sbjct 214144 A--GCCTTAATCTTCTTCTTTGCCAATCCTTCCTTCTCATATTTGTGATACAGTTGAACA 214201
Query 37943 AAT-CATTCCCCCATACATCGCAT--AATCCTGGACATTCGCATGGACACATTAGAGACC 37999
||| ||| | ||||||||| ||| || || ||| || ||||| | | |||
Sbjct 214202 AATGCAT--CACCATACATCTCATTCAAACCAGGAGCATCATCTGGACTAAACAAGCACC 214259
Query 38000 ATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATA 38059
||||||||||||| || || |||||| |||| ||| || | ||||| ||| || |
Sbjct 214260 ATTCTTCATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGCATAGAACA 214319
Query 38060 AATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATA 38119
|||| | ||| ||||| || || |||||| |||||| ||| ||||| | |
Sbjct 214320 AATCACGAGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAATCCATCA 214379
Query 38120 TATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCT 38179
|||||| ||||||||||| | ||| || | | ||| |||||||| |||| ||| || |
Sbjct 214380 CATCAGCATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTT 214439
Query 38180 GATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATT 38239
||| || |||||| | ||||||||| | | ||| | ||||||||| ||||| || ||
Sbjct 214440 GATCAACATATCTTGCAGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGAAG 214499
Query 38240 TGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTA 38299
| || ||| |||| || || | ||| | | || || ||| ||| | || |
Sbjct 214500 TACCATTTGATCCGGCAATGTATGCACCAGTGGATCTAATGTTAGATATATGTAGACCGA 214559
Query 38300 TTCCACCTGCATGTTTTGATATTAAAGC-GCATTGTTTTAACGTATCAAATATACCTTCT 38358
| ||||| ||| || || |||| ||| | ||| | || || | | |||| || ||
Sbjct 214560 TACCACCAGCAGCCTTCGAGATTAGAGCAGTCTTG-TGCAAAGTCTTATATATGCCATCG 214618
Query 38359 ATACTGTCATCCTTTATTGGTAGTATAAAACA--ACTAGACATTTGAGGCAATGGAGTTC 38416
|| |||||| | |||| |||| ||||| | ||| || | || ||| || |
Sbjct 214619 ATGGAGTCATCTTCTATTCCAAGTAGGAAACAGGATGAGAGATAT--GGAGTTGGTGTAC 214676
Query 38417 CGGCGTTAAATAATGTAGGAGATGCATGTATGA 38449
| | ||| |||| ||| || |||||||| ||||
Sbjct 214677 CAGAGTTGAATAGTGTTGGTGATGCATGGATGA 214709
Score = 149 bits (164), Expect = 6e-31
Identities = 400/607 (66%), Gaps = 10/607 (2%)
Strand=Plus/Plus
Query 11612 AAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGT 11671
||||| ||||| ||||| ||||| ||| || |||||||| || | | || |
Sbjct 293530 AAATGAGCAAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAAC 293589
Query 11672 TCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCA 11731
|||||||| || || || || |||||||| |||| || || | ||| || |||| |||
Sbjct 293590 TCATTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCA 293649
Query 11732 AATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATAT 11791
|| |||||||| ||||| || || || ||||| ||||| || || | ||| || || |
Sbjct 293650 AAGGAACCAGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAAC 293709
Query 11792 AC--CTTGTTGCTAGATA-TCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC 11848
| ||| || | | | ||||| | ||||||||||| ||||| || | |||
Sbjct 293710 AAGGCTTCTTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGA 293769
Query 11849 ATTGTTTCTATAGCGTTAAATAAATGCATTTTTTCTATATT--ATCTCTTACATATGTAT 11906
|| || || || || ||||| |||| | | || | | ||| | | ||| || |
Sbjct 293770 ATAGTCTCAATGGCATTAAACAAAT--ACTCAGCCTGTTGTGGATCCTTGATATAAGTGT 293827
Query 11907 CTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGA 11966
| || || | | || | || || ||||| || ||||| ||||| || || ||||
Sbjct 293828 CAATCAAGAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGA 293887
Query 11967 AACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTA 12026
|||| || |||| | || || || || | || | || | || |||||||| |
Sbjct 293888 AACACTTAGCTTCTGGAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAA 293947
Query 12027 CAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTT 12086
| ||||| ||| || ||||| || || || | | | || ||| | ||| | |
Sbjct 293948 CGATACCGTCAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCT 294007
Query 12087 TAGTTAAT---TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCC 12143
| | ||| || | |||||||| ||||| || || ||||| | || ||| ||||||
Sbjct 294008 CATTCAATCTGTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCC 294067
Query 12144 AAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAA 12203
| ||| || | | | || || | |||||| ||||| ||||| || |||||||
Sbjct 294068 AGAAAGAAGCTTCAGCCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAAAA 294127
Query 12204 TAACGAA 12210
||| ||
Sbjct 294128 GAACAAA 294134
>seq6
Length=1133955
Score = 136 bits (150), Expect = 4e-27
Identities = 418/642 (65%), Gaps = 6/642 (1%)
Strand=Plus/Plus
Query 37995 AGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGT 38054
|| |||||| ||| ||| || |||||||| || |||||||| | ||| ||||| |
Sbjct 479009 AGTCCATTCACCATTAGATTCAACACGTTCCATGAACAAATCAGGGATCCACAATGCTGG 479068
Query 38055 AAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATC 38114
|| ||||| | ||| ||||| || || ||||||||| | | | |||||
Sbjct 479069 GAACAAATCACGAGCTCTGATCTCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAATC 479128
Query 38115 GAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACC 38174
|| ||||| |||||||||||||| | ||||| | | ||| || ||||| || | |||
Sbjct 479129 AAAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGTTACC 479188
Query 38175 TCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATT 38234
|| || | | || | | | ||||| ||| | | | | ||| || | | ||| ||
Sbjct 479189 ACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACCGTT 479248
Query 38235 AGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAA 38294
||| | ||||| |||| | || |||| || |||||| | ||| || ||
Sbjct 479249 AGAAGTACCGTTAGTACCAGCAATGTAAGAGCCTGTAGCTCTAACGTTATGGATGTGTAA 479308
Query 38295 TCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACC 38354
|| || ||||| || || || || || || |||||||| || || ||| | |||||
Sbjct 479309 ACCGATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAGATACC 479368
Query 38355 TTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGT 38414
|| || || || | || | | | |||||| ||||| || || ||| ||
Sbjct 479369 CTCGATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGTGGGGT 479428
Query 38415 TCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATA 38474
|| ||||| || || || ||||| || || |||| || | || |||| |||||
Sbjct 479429 ACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAAGTATCTCTCAGACATGAGGTTATA 479488
Query 38475 TGTTTCTATTACATCATCT-ATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCA 38533
|| || || || | || | ||||| | || || ||||| | || || ||||| | ||
Sbjct 479489 AGTCTCAATAAC-TGATTTAATATCTCTACCATGGATACCGATAGCGACTCTCATGATCA 479547
Query 38534 TATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATG 38593
||| ||||| | ||| | |||| ||| | | || ||| | || ||||
Sbjct 479548 AATGCTGTGGACGTTCAGCGACTTTACCATTAACACGCAACAAGTAAGATCTCTCCAATG 479607
Query 38594 TTTTTATTCCAAAATAACTATA--TGAATAATCTCTATCGTA 38633
| || | ||||| || |||| ||| |||||||||||||
Sbjct 479608 TCTTGAAACCAAAGTAGTTATAGTTGA--AATCTCTATCGTA 479647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524729721280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |