Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5 172 5e-38 seq6 136 4e-27 >seq5 Length=1593029 Score = 172 bits (190), Expect = 5e-38 Identities = 462/693 (67%), Gaps = 34/693 (5%) Strand=Plus/Plus Query 37774 ATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATAC 37833 ||||| |||||||| | ||||| ||| ||||||||| ||| ||||| || || | Sbjct 214034 ATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAGCATGAAA 214093 Query 37834 GGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACG 37893 || || ||| | ||||| ||| | || || | |||||| ||||| | Sbjct 214094 GGACCACCAGTTTCAACTTGAGACTCCAAGATTGAGTGCCATAA-CTTCT---------G 214143 Query 37894 ATCGCTTTAAtttttttCTTTGTT--TCGTA--TTCT-ATAT-----ATA-ATTTGTTAA 37942 | || ||||| || ||||||| || | |||| |||| ||| | ||| | Sbjct 214144 A--GCCTTAATCTTCTTCTTTGCCAATCCTTCCTTCTCATATTTGTGATACAGTTGAACA 214201 Query 37943 AAT-CATTCCCCCATACATCGCAT--AATCCTGGACATTCGCATGGACACATTAGAGACC 37999 ||| ||| | ||||||||| ||| || || ||| || ||||| | | ||| Sbjct 214202 AATGCAT--CACCATACATCTCATTCAAACCAGGAGCATCATCTGGACTAAACAAGCACC 214259 Query 38000 ATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATA 38059 ||||||||||||| || || |||||| |||| ||| || | ||||| ||| || | Sbjct 214260 ATTCTTCATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGCATAGAACA 214319 Query 38060 AATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATA 38119 |||| | ||| ||||| || || |||||| |||||| ||| ||||| | | Sbjct 214320 AATCACGAGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAATCCATCA 214379 Query 38120 TATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCT 38179 |||||| ||||||||||| | ||| || | | ||| |||||||| |||| ||| || | Sbjct 214380 CATCAGCATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTT 214439 Query 38180 GATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATT 38239 ||| || |||||| | ||||||||| | | ||| | ||||||||| ||||| || || Sbjct 214440 GATCAACATATCTTGCAGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGAAG 214499 Query 38240 TGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTA 38299 | || ||| |||| || || | ||| | | || || ||| ||| | || | Sbjct 214500 TACCATTTGATCCGGCAATGTATGCACCAGTGGATCTAATGTTAGATATATGTAGACCGA 214559 Query 38300 TTCCACCTGCATGTTTTGATATTAAAGC-GCATTGTTTTAACGTATCAAATATACCTTCT 38358 | ||||| ||| || || |||| ||| | ||| | || || | | |||| || || Sbjct 214560 TACCACCAGCAGCCTTCGAGATTAGAGCAGTCTTG-TGCAAAGTCTTATATATGCCATCG 214618 Query 38359 ATACTGTCATCCTTTATTGGTAGTATAAAACA--ACTAGACATTTGAGGCAATGGAGTTC 38416 || |||||| | |||| |||| ||||| | ||| || | || ||| || | Sbjct 214619 ATGGAGTCATCTTCTATTCCAAGTAGGAAACAGGATGAGAGATAT--GGAGTTGGTGTAC 214676 Query 38417 CGGCGTTAAATAATGTAGGAGATGCATGTATGA 38449 | | ||| |||| ||| || |||||||| |||| Sbjct 214677 CAGAGTTGAATAGTGTTGGTGATGCATGGATGA 214709 Score = 149 bits (164), Expect = 6e-31 Identities = 400/607 (66%), Gaps = 10/607 (2%) Strand=Plus/Plus Query 11612 AAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGT 11671 ||||| ||||| ||||| ||||| ||| || |||||||| || | | || | Sbjct 293530 AAATGAGCAAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAAC 293589 Query 11672 TCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCA 11731 |||||||| || || || || |||||||| |||| || || | ||| || |||| ||| Sbjct 293590 TCATTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCA 293649 Query 11732 AATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATAT 11791 || |||||||| ||||| || || || ||||| ||||| || || | ||| || || | Sbjct 293650 AAGGAACCAGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAAC 293709 Query 11792 AC--CTTGTTGCTAGATA-TCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC 11848 | ||| || | | | ||||| | ||||||||||| ||||| || | ||| Sbjct 293710 AAGGCTTCTTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGA 293769 Query 11849 ATTGTTTCTATAGCGTTAAATAAATGCATTTTTTCTATATT--ATCTCTTACATATGTAT 11906 || || || || || ||||| |||| | | || | | ||| | | ||| || | Sbjct 293770 ATAGTCTCAATGGCATTAAACAAAT--ACTCAGCCTGTTGTGGATCCTTGATATAAGTGT 293827 Query 11907 CTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGA 11966 | || || | | || | || || ||||| || ||||| ||||| || || |||| Sbjct 293828 CAATCAAGAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGA 293887 Query 11967 AACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTA 12026 |||| || |||| | || || || || | || | || | || |||||||| | Sbjct 293888 AACACTTAGCTTCTGGAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAA 293947 Query 12027 CAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTT 12086 | ||||| ||| || ||||| || || || | | | || ||| | ||| | | Sbjct 293948 CGATACCGTCAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCT 294007 Query 12087 TAGTTAAT---TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCC 12143 | | ||| || | |||||||| ||||| || || ||||| | || ||| |||||| Sbjct 294008 CATTCAATCTGTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCC 294067 Query 12144 AAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAA 12203 | ||| || | | | || || | |||||| ||||| ||||| || ||||||| Sbjct 294068 AGAAAGAAGCTTCAGCCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAAAA 294127 Query 12204 TAACGAA 12210 ||| || Sbjct 294128 GAACAAA 294134 >seq6 Length=1133955 Score = 136 bits (150), Expect = 4e-27 Identities = 418/642 (65%), Gaps = 6/642 (1%) Strand=Plus/Plus Query 37995 AGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGT 38054 || |||||| ||| ||| || |||||||| || |||||||| | ||| ||||| | Sbjct 479009 AGTCCATTCACCATTAGATTCAACACGTTCCATGAACAAATCAGGGATCCACAATGCTGG 479068 Query 38055 AAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATC 38114 || ||||| | ||| ||||| || || ||||||||| | | | ||||| Sbjct 479069 GAACAAATCACGAGCTCTGATCTCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAATC 479128 Query 38115 GAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACC 38174 || ||||| |||||||||||||| | ||||| | | ||| || ||||| || | ||| Sbjct 479129 AAAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGTTACC 479188 Query 38175 TCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATT 38234 || || | | || | | | ||||| ||| | | | | ||| || | | ||| || Sbjct 479189 ACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACCGTT 479248 Query 38235 AGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAA 38294 ||| | ||||| |||| | || |||| || |||||| | ||| || || Sbjct 479249 AGAAGTACCGTTAGTACCAGCAATGTAAGAGCCTGTAGCTCTAACGTTATGGATGTGTAA 479308 Query 38295 TCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACC 38354 || || ||||| || || || || || || |||||||| || || ||| | ||||| Sbjct 479309 ACCGATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAGATACC 479368 Query 38355 TTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGT 38414 || || || || | || | | | |||||| ||||| || || ||| || Sbjct 479369 CTCGATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGTGGGGT 479428 Query 38415 TCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATA 38474 || ||||| || || || ||||| || || |||| || | || |||| ||||| Sbjct 479429 ACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAAGTATCTCTCAGACATGAGGTTATA 479488 Query 38475 TGTTTCTATTACATCATCT-ATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCA 38533 || || || || | || | ||||| | || || ||||| | || || ||||| | || Sbjct 479489 AGTCTCAATAAC-TGATTTAATATCTCTACCATGGATACCGATAGCGACTCTCATGATCA 479547 Query 38534 TATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATG 38593 ||| ||||| | ||| | |||| ||| | | || ||| | || |||| Sbjct 479548 AATGCTGTGGACGTTCAGCGACTTTACCATTAACACGCAACAAGTAAGATCTCTCCAATG 479607 Query 38594 TTTTTATTCCAAAATAACTATA--TGAATAATCTCTATCGTA 38633 | || | ||||| || |||| ||| ||||||||||||| Sbjct 479608 TCTTGAAACCAAAGTAGTTATAGTTGA--AATCTCTATCGTA 479647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524729721280