Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq6 282 6e-71 seq5 179 5e-40 >seq6 Length=1133955 Score = 282 bits (312), Expect = 6e-71 Identities = 1209/1892 (64%), Gaps = 50/1892 (3%) Strand=Plus/Plus Query 64835 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 64893 |||| ||||| ||||| | ||| || || | | || | | ||||||||| || || | Sbjct 477784 CAATAGTGAACTGAATAGCAGCAGAAGCAGCCTGGGTTCTCAAATAGTACATACCAGTCT 477843 Query 64894 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 64953 | | ||| |||| ||||| || |||||| || | || | | ||| || Sbjct 477844 TCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTTACCCATAGTTGGAGCTC 477903 Query 64954 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 65013 || || || |||| ||||||| |||||| ||||| || | | || |||||||| | Sbjct 477904 TAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAGCACGATCAGCAGCCATAT 477963 Query 65014 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 65072 ||||| |||||||| | ||| ||||||| || || || || || | ||| ||| | Sbjct 477964 CGATGATAGTCTTTTGAGAAATCTCCCAAACGGTCTTGTACAAATCTTTCAATTCCTT-T 478022 Query 65073 GGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCA 65129 |||| ||||| || || ||||| || || ||| | || || | |||| || Sbjct 478023 GGAATGTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGATGATGTGACTCTTCATAGAG 478082 Query 65130 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 65189 |||| ||| | || ||| | | ||| | || || ||||| | || ||| Sbjct 478083 TCATCCCAAACACCCAAATCAACCAAATCACGAAGCAAATATGGGTTAACAATCTGGAAT 478142 Query 65190 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTA 65249 || |||| | || | |||| |||||| ||| || || ||||| | | | || || Sbjct 478143 TCACCAGCAAGGACACGACGAGAGTAAATGTTAGAAGTGTATGGTTCGAAACATTCGTTG 478202 Query 65250 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 65309 | ||||| ||||||| ||| || ||||| ||||| || || || | ||| ||||| Sbjct 478203 TAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTGGAGCAACAAGCAAAGAGTTTCTC 478262 Query 65310 AGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG--TA 65367 | |||||| | || | | | || |||| ||||||| ||| | ||| || || | Sbjct 478263 AAACCGTACTTGACAATATCAGCCTTAAGAGTATCCCAATCCCACAAATCGGAAGGCTTT 478322 Query 65368 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 65427 | | || || ||| ||| || || ||| ||| | Sbjct 478323 CTTCCCCAAAGGTCAAAC--TGAAGCTGACCCTTAGAAGCTGGGGAACCTTGGAATGATT 478380 Query 65428 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 65487 ||||||| ||||| || || || ||| | | ||| || ||| ||| |||||||| Sbjct 478381 CGTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACTCCAAAGCAGCGTGATAAATGG 478440 Query 65488 TTTCGAAGATCTTCTTATTTAGATCTTGTGC--TTCCAGGCTATCAAATGGATAATTTAA 65545 | |||||||||| | || | || | || || ||| | ||||||| || || Sbjct 478441 TCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGATT--CAAATGGCAAACGCAA 478498 Query 65546 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 65605 | ||||| || || ||||| ||||||||||| | | || ||||| | |||| |||| Sbjct 478499 AATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTGGTCTGTTTCTCATATT 478558 Query 65606 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT--- 65662 ||| || ||||||||| | || || || ||| || || ||| | || | || Sbjct 478559 GGAGTTTCTAGCTTCTGGGACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTCTT 478618 Query 65663 TCTGACAA--TT---ACTTTGACCACATCCTTCA---------GTTTGAG----AAAATC 65704 | |||||| || | ||||| | | |||| || |||| | ||| Sbjct 478619 TGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAGTCTGAGTGGTACCATC 478678 Query 65705 AAATCGCTCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTAC 65764 || | || || | || || |||||||| || |||| |||||||| || || Sbjct 478679 AAGGGATTTTTCAATGA--AAGCTGG-CAATGCAATGGAGGCCAAGTTACAAACAGCAAC 478735 Query 65765 CTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCC 65824 || | | || | |||| | |||||| || | ||| | ||||||| | || Sbjct 478736 TTCTTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAGAAGACTTGATCATACC 478795 Query 65825 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACC 65884 || || | || ||| |||| | |||||| |||||||| ||||| |||||||||||||| Sbjct 478796 CAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAAGCATGAATGGAGTACC 478855 Query 65885 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT 65944 ||| ||| |||| | || | || || | ||| | | ||||||| | | ||| Sbjct 478856 AGTCTCAGTCTGGGCATCAAGGATTGCATACCACAACTTTTGAGCCTTGACAGTC--TTT 478913 Query 65945 GTATCTCTTTTCTCTTTCGTATAGTGT--ATACA-ATCGTTCGAACTCGTCTCCCCAAAC 66001 || | | |||||| ||| | ||| | | | || ||| || || || || | Sbjct 478914 CTACCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTT-GAATTCATCACCATAA-C 478971 Query 66002 ATTGTCCAAT-CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCA 66060 | | ||| || || ||||| ||| | | ||| | ||| || || | | | | Sbjct 478972 AGTCAGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCATTCACCATTAGATTCAA 479031 Query 66061 CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTT 66120 | |||| ||| || | |||||| ||||| | ||| || ||||| | | ||| | Sbjct 479032 CACGTTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTGATCT 479091 Query 66121 CCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTT 66180 | || || || ||||||| ||| |||| ||| | | ||||| ||||| |||| Sbjct 479092 CTTCTTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCATGGTT 479151 Query 66181 CCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 66240 |||| || | ||| | | ||||| | ||||| || || || || | ||| | ||| | Sbjct 479152 CCAAATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAG 479211 Query 66241 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGA 66300 |||| ||| | || | | ||||||||| | ||| || || ||||| || || || | | Sbjct 479212 TGTTGTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCAGCAA 479271 Query 66301 TATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAG 66360 | || || | || | || ||| || || ||| || || || || | || | Sbjct 479272 TGTAAGAGCCTGTAGCTCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTCTTGG 479331 Query 66361 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 66420 |||| || || ||| |||| || || |||||||| ||||| || ||| || |||| Sbjct 479332 AGATCAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTCATAG 479391 Query 66421 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 66480 | || ||||| ||||| || | | || || || || || || || |||| Sbjct 479392 CCACAAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTTGGAG 479451 Query 66481 AAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT 66540 ||||||| || || || | ||||| | || || || ||||||||| |||| | |||| Sbjct 479452 AAGCGTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGTCTCAATAACTGATTTAATAT 479511 Query 66541 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 66600 | | ||| || || | ||||| | ||| | || ||||| || | |||| ||| | Sbjct 479512 CTCTACCATGGATACCGATAGCGACTCTCATGATCAAATGCTGTGGACGTTCAGCGACTT 479571 Query 66601 TGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-- 66658 | || | ||||||||| ||| | ||||| || || |||||||| ||||| || Sbjct 479572 TACCATTAACACGCAACAAGTAAGATCTCTCCAATGTCTTGAAACCAAAGTAGTTATAGT 479631 Query 66659 TGAAAAGTCTCGTTCGTAAATAATAACCGAGT 66690 ||||| |||| ||||| || || | |||| Sbjct 479632 TGAAA--TCTCTATCGTAGATGATGGCAGAGT 479661 >seq5 Length=1593029 Score = 179 bits (198), Expect = 5e-40 Identities = 406/607 (67%), Gaps = 10/607 (2%) Strand=Plus/Plus Query 36140 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT 36199 ||||| ||||| |||||| || || || ||| | ||| || || | | ||| || Sbjct 293530 AAATGAGCAAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAAC 293589 Query 36200 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 36259 || || || || || | || ||||| | || | ||| || | ||| || || || ||| Sbjct 293590 TCATTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCA 293649 Query 36260 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 36319 || || ||||| ||||| || ||||| || || |||||||||| ||||||||| || | Sbjct 293650 AAGGAACCAGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAAC 293709 Query 36320 CCGGCACTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 36376 ||| |||| ||||| | ||||||||| |||||||| || | ||| || Sbjct 293710 AAGGCTTCTTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGA 293769 Query 36377 ATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCA 36436 || ||||| || |||||||| | ||| | | | ||| || | ||| || ||| Sbjct 293770 ATAGTCTCAATGGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCA 293829 Query 36437 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAA 36496 ||||| ||| || | || || |||||||| || || ||||| || ||||||||| Sbjct 293830 ATCAAGAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAA 293889 Query 36497 CATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCA 36554 || |||| || | ||| || || || | | | || ||||| | || || ||||| | Sbjct 293890 CACTTAGCTTCTGGAATTTGCACCTCGGCAGAGAA--GTTCTCAACCAAGTTCTCATTAA 293947 Query 36555 CTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTG 36614 | || |||||| || ||||| || || | ||| | || || | ||| || Sbjct 293948 CGATACCGTCAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCT 294007 Query 36615 GTGTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCC 36671 | | | || |||||||||| | ||| ||||| | ||| | || || | |||| Sbjct 294008 CATTCAATCTGTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCC 294067 Query 36672 AAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAA 36731 | || || || || ||||| || || | |||||| ||||| || | ||||| |||| Sbjct 294068 AGAAAGAAGCTTCAGCCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAAAA 294127 Query 36732 TAACAAA 36738 |||||| Sbjct 294128 GAACAAA 294134 Score = 165 bits (182), Expect = 1e-35 Identities = 560/853 (66%), Gaps = 36/853 (4%) Strand=Plus/Plus Query 65472 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 65531 ||||| | ||| |||||||| ||||||| || || || | | || | |||| ||| Sbjct 213671 GCACCATGATACATGGTTTCAAAGATCTCTTTGTTAAGTTTGCGAGCCTGAGGGCTGTCA 213730 Query 65532 AATGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 65590 ||||| ||| | | || || || ||| || | ||||||||| |||||| | || || Sbjct 213731 AATGGCAAATGGA-GTGACATGAATAAGTCAGCAAGTCCTTGAACTCCAATAGCAATTGG 213789 Query 65591 TCTATGTCTC---TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTAT 65647 | ||| || ||| | || || || ||||| | || || | || ||| || Sbjct 213790 ACGGTGTTTCAAGTTACTTGAC---TCCGCCTCTGGTGTTGGGTAGATACCAACATCGAT 213846 Query 65648 AATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC-AA 65706 || || || ||||| || | ||||||||| ||| | |||||| || ||| || Sbjct 213847 AACCTTGTTCAGATTCTTGGTCAATACTTTGACGACAGAGTGTAGTTTGTGATGATCGAA 213906 Query 65707 ATC--GCTCAT-----------CTA--TTACAAACATGTTCAATG--CAACAGATGCCAG 65749 | | | |||| || || ||| | ||| | | ||||||| |||| Sbjct 213907 AACAAGTTCATTATCAACTTCACTTCGTTTCAAGAAAGTTGGAAGAGCAACAGAGGCCAA 213966 Query 65750 ATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACT 65809 ||||||||||| ||| | || | ||||| | | ||| || | || Sbjct 213967 GTTACAAACGGCAGTCTCTTCAGGTGATGAGTATTGAACCACTTCACAACACAAGTTCGA 214026 Query 65810 ACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAG 65869 ||||||| || || ||||| | |||||||||||| | ||||| ||||||||||| || Sbjct 214027 GGACTTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAG 214086 Query 65870 AATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA-GACGACTCGAG 65928 ||||| ||| ||||||||||| ||||| || | || | | ||| || || ||| Sbjct 214087 CATGAAAGGACCACCAGTTTCAACTTGAGACTCCAAGATTGAGTGCCATAACTTCT-GAG 214145 Query 65929 CCTTTAT-TATAGATTTGTATCTCTTTTCTCTTTCGTA-TAGTGTATACAATCGTTCGAA 65986 |||| || | |||| || || || | || || | ||| ||||| | | | || Sbjct 214146 CCTTAATCTTCTTCTTTGCCAATCCTTCCT-TCTCATATTTGTG-ATACAGTTGAACAAA 214203 Query 65987 CTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTC 66046 | || || | | | | ||| |||||| ||||| |||| | ||| |||| || Sbjct 214204 TGCATCACCATACATCTCATTCAAACCAGGAGCATCATCTGGACTAAACAAGCACCATTC 214263 Query 66047 TCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAAAT 66105 | | || | || ||| || ||| || ||||| || ||||| ||||| ||| || |||| Sbjct 214264 TTCATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGC-ATAGAACAAAT 214322 Query 66106 CTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCATAATA 66164 | | | ||| || || ||||| |||||| ||||| | | ||| |||| | | Sbjct 214323 CACGAGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAG-TTTAAGAAATCCATCACA 214381 Query 66165 TCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGA 66224 ||| |||||| |||||||| || ||||| | | || || | || || || || ||| Sbjct 214382 TCAGCATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGA 214441 Query 66225 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTA 66284 || | ||||| || ||||||||| | ||||| | ||| || | ||||| || || ||| Sbjct 214442 TCAACATATCTTGCAGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGAAGTA 214501 Query 66285 CCATTGGTCCCGG 66297 ||||| | |||| Sbjct 214502 CCATTTGATCCGG 214514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172701274080