Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq5 149 6e-31 >seq5 Length=1593029 Score = 149 bits (164), Expect = 6e-31 Identities = 471/723 (65%), Gaps = 8/723 (1%) Strand=Plus/Plus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 |||||||| ||| |||||| || ||||| |||||||| ||||| ||| || || || Sbjct 293257 TTTTGATAATCAGAAACTCTCTTCTCAAAGAAGTTAGTCTTACCAGCCAAGGAAATGTTC 293316 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAAT 13488 |||||||| |||||||| || | | | | || | ||| || | ||||| Sbjct 293317 TCCATAAAGTCGAATGGGTTAGAAACGTTGTAGAACTTCTTGTTACCAAGGGC-AATAAG 293375 Query 13489 AAT-CTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13547 || | ||||||| |||| || |||||| ||| | | |||||||| | | Sbjct 293376 AAGACGATCAGCACAGAACTGAACGTATTGAACCATAAGCTTGGCGTTCATACCGAGCAA 293435 Query 13548 TTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 13607 | |||| || || || | || ||| || ||||| || | ||||| Sbjct 293436 AGAAGCTGGAAGAGCATCGGTAAAGTACTCAGATTCAATCTCAACAGCTTCAGTAATAAT 293495 Query 13608 AATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13667 ||| | ||| ||| ||| || | || | ||| ||| | ||||| ||||| Sbjct 293496 CTTCTCCACAATCTCAGAAGATGGCTTGTTCTTCAAATGAGCAAACAACAAACAGGCAAA 293555 Query 13668 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13727 ||| || | || ||||| | | ||| | || || || || || || |||||||| Sbjct 293556 GTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAAGTCAAACCTGGCAT 293615 Query 13728 CAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTC 13787 ||| |||| || || ||||| || || | || || || || || ||||| || || || Sbjct 293616 CAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACCAGAGAAGAAGATACCTTC 293675 Query 13788 AACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTT 13847 ||| || ||||| || | |||| || || ||| | |||| || | | |||||| | Sbjct 293676 AACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAGGCTTCTTCATCGGCAATCCATCT 293735 Query 13848 TCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATG 13907 |||||| |||| || || |||||| | || || || || ||||| || |||| Sbjct 293736 CAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTCAATGGCATTAAACAAATA 293795 Query 13908 TTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAAT-AAGTAAGCTATACATTTCAGA 13964 || || || | | |||| || || || ||||| ||| || || | ||||| Sbjct 293796 CTCAGCCTGTTGTGGATCCTTG--ATATAAGTGTCAATCAAGAGAG-AGTATGTCTCAGA 293852 Query 13965 GTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTAC 14024 ||| ||||| || || || || ||||| || ||||| ||||||||| ||| || Sbjct 293853 GTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGCAC 293912 Query 14025 CTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAA 14084 ||| | | || | || ||||||| |||||||| ||||| ||| ||| ||||| || Sbjct 293913 CTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACGATACCGTCAGAAGCGGCAAAGAA 293972 Query 14085 TGC 14087 || Sbjct 293973 GGC 293975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588728211680