Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq5 170 3e-37 seq7 120 5e-22 seq6 109 8e-19 >seq5 Length=1593029 Score = 170 bits (188), Expect = 3e-37 Identities = 393/584 (67%), Gaps = 15/584 (3%) Strand=Plus/Minus Query 124998 TTTCCCA-TCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTG 125056 ||||||| ||| ||| ||||| || ||| | ||||| |||||| | || || || || Sbjct 294126 TTTCCCAATCAAGTACCATGAGATCTGGCAGGCATACAAGAAGGCTGAAGCTTCTTTCTG 294067 Query 125057 GACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGA 125116 ||| | || ||| | ||| |||| ||||| || | |||||| | | | |||| ||| Sbjct 294066 GACCGCTGAGGAGATTGATTTGTCTAAGGATTTGCATGATTGGAACAACAGATTGAATGA 294007 Query 125117 AACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGT 125176 | ||| || || || || | || | ||||||||||||| || || || ||||| Sbjct 294006 GAATGAACGTTTCTTCATCTCTCGTGTTCTTGCCTTCTTTGCCGCTTCTGACGGTATCGT 293947 Query 125177 CAACGACAA-TCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCT 125235 || || || | ||||| | |||||| ||| || |||||||| | ||| | Sbjct 293946 TAATGAGAACTTGGTTGAGA-ACTTCTCTGCCGAGGTGCAAATTCCAGAAGCTAAGTGTT 293888 Query 125236 TTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTG 125295 | ||||| |||||||||||||| |||||| | ||||| || | |||||| |||||| Sbjct 293887 TCTACGGTTTCCAAATCATGATGGAGAACATTCACTCTGAGACATACTCTCTCTTGATTG 293828 Query 125296 ACATGTACATTCGCGATCCGCAAC---GTAAACACATGCTCTTTAACGCAATCGACACGG 125352 ||| || || ||||| |||| | | | || ||||| || || || || Sbjct 293827 ACACTTATATCAAGGATCCACAACAGGCTGAGTATTTG---TTTAATGCCATTGAGACTA 293771 Query 125353 TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGAT---CGATGACGACAAGT 125409 | || | ||| || |||||| | |||| | | ||||| |||||| | ||| Sbjct 293770 TTCCATGTATTAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCCGATGA--AGAAGC 293713 Query 125410 CTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTA 125469 ||| || || || ||||| || || || ||||| || || || |||||||| || ||| Sbjct 293712 CTT-GTTCGGTGAGAGACTTGTTGCCTTTGCCGCTGTTGAAGGTATCTTCTTCTCTGGTT 293654 Query 125470 GTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTA 125529 ||||| | || || ||| | |||||| | || | ||||| || |||| | || Sbjct 293653 CCTTTGCCTCTATTTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCTA 293594 Query 125530 ACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 | ||||| || | || || || || | ||| |||||||||| Sbjct 293593 ATGAGTTGATTTGCCGTGATGAAGGTTTGCACACTGACTTTGCC 293550 >seq7 Length=431226 Score = 120 bits (132), Expect = 5e-22 Identities = 361/553 (65%), Gaps = 26/553 (5%) Strand=Plus/Minus Query 69868 TCGGTACTCGTTGAGGGACAACAACCTACCTCTGTTGACGACCAAGACTGTCTTTGTCAA 69927 ||| | ||| |||| ||| ||| | || ||||| ||||| |||| ||||| || Sbjct 262343 TCGTTTCTCCTTGAAGGATGACACTTTCCCACTGTTAACGACTAAGAAGGTCTTCACTAA 262284 Query 69928 GGGCGTCATCGAGGAGCTCTTGTGGATGATTTCCGGATCGACCAATGCCAAAGAGCTGAG 69987 ||| ||||| ||| || |||||| | ||| |||| | || ||| || |||| || Sbjct 262283 GGGTATCATCTTGGAACTATTGTGGTTTATTGCCGGCTGCACTGATGGTAAGAAGCTCAG 262224 Query 69988 CCGAAAGGGTGTACACATTTGGAGCGGCAACAGTAGTCGAAGCGTTT---TGGATTCGCT 70044 | | || ||| | |||||| || || | || ||| | | | ||| || Sbjct 262223 TGAACAAGGAGTAAAGATTTGGGAAGGTAATGGA--TC-AAGAGAATACCTTGATAGTCT 262167 Query 70045 CGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCA 70104 || || ||||| | | || || ||| | || ||||| || || ||||| ||||| || Sbjct 262166 TGGATTAACCGATCGTCGTGAAGGTGATTTAGGTCCAGTTTATGGTTTCCAATGGAGACA 262107 Query 70105 CTCGGGCACCAAGTATGTAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAA-T 70163 || || | |||| |||||| || | |||||| |||||||||||||||||||| | Sbjct 262106 CTTTGGTGCTGAGTACAAAGACTGTGATGCTGACTATACGGGTCAGGGTGTTGATCAACT 262047 Query 70164 TGCAGACAATCATTGACACTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCT 70223 || || | | || | | | ||||| || ||| ||||| || ||| | ||| | Sbjct 262046 CGCTGA-AGTGATCCATAAGTTGAAGACAAACCCATACGATAGAAGAATCATTATGAGTG 261988 Query 70224 CATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGT 70283 | |||||||| |||| || | | |||||| ||||||| ||||| ||| |||| | Sbjct 261987 CTTGGAATCCACCAGACTTCCCAAAGATGGCATTACCACCATGTCATGTTTTTTCTCAAT 261928 Query 70284 T---------TTACTCGTACGATGG--------CA-AATTGTCATGCTTAATGTATCAGA 70325 | || | | | ||||| || || | || || ||| | ||||||| Sbjct 261927 TCTATGTCAATTTCCCAAAGGATGGTGGTAAGCCACAACTATCTTGTTTACTCTATCAGA 261868 Query 70326 GGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGC 70385 | || ||||| |||||||| || ||||||||||| || || | ||||| Sbjct 261867 GATCATGTGATATGGGTCTCGGTGTTCCATTTAACATTGCCTCATACGCTCTCTTGACAA 261808 Query 70386 ACATGATTGCTCA 70398 | |||||||| || Sbjct 261807 AGATGATTGCACA 261795 >seq6 Length=1133955 Score = 109 bits (120), Expect = 8e-19 Identities = 312/464 (67%), Gaps = 22/464 (5%) Strand=Plus/Minus Query 97772 GTACGGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGT 97831 |||||||||||||||||||||||| || || || ||||| || || | ||||| ||| | Sbjct 478271 GTACGGTTTGAGAAACTCTTTGCTTGTTGCTCCAATGCCAACTGCCTCGACTTCTCAAAT 478212 Query 97832 GTTTGGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTACCAGAGACGCACCCA 97891 || || | |||| ||| ||||| | ||| || ||||| ||| | || || Sbjct 478211 CTTGGGTTACAACGAATGTTTCGAACCATACACTTCTAACATTTACTCTCGTCGTGTCCT 478152 Query 97892 GTCTGGAGAGTTTCA-ATTGACCAACGTGCACTTGGTTCGAGACTTGGAACGGCTCAATC 97950 |||| || || || |||| ||| | ||| |||| || |||| | | Sbjct 478151 TGCTGGTGAATTCCAGATTGTT-AACCCATATTTGCTTCGTGATTTGGTTGATTTGGGTG 478093 Query 97951 TGTGGAACGATGAC---ATGGCCCAGTTG-ATCATGTACAACAATGGGTCCATTCAAAAC 98006 | ||| |||||| ||| ||| ||||| | | || || || ||||||||| Sbjct 478092 TTTGG---GATGACTCTATGAAG-AGTCACATCATCTCTGATAACGGTTCTATTCAAAAC 478037 Query 98007 ATTACCAT-CATCCCGGAAGAGTTGCGCAGAATC-TACAAGACTGTCTGGGAGATTCCGA 98064 |||||| ||| || | || ||| ||| | |||||||| || ||||||||| | Sbjct 478036 -TTACCAAACATTCCAAAGGAATTGAA-AGATTTGTACAAGACCGTTTGGGAGATTTCTC 477979 Query 98065 CCAAGACGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATCGT 98124 ||||| | |||||||||||||| || | | || | |||||| || |||||| | Sbjct 477978 AAAAGACTATCATCGATATGGCTGCTGATCGTGCTGCTTTCATTGATCAATCTCAATCTT 477919 Query 98125 TCAATCTGTACGTTGCCGAGC-CCACCTACAGTCGTA---TGACTTCGATACACTTTTAC 98180 | || | || || |||| ||| ||| | ||| |||| || || ||||| ||| Sbjct 477918 TGAACATTCACATT--AGAGCTCCAACTATGG--GTAAGTTGACCTCTATGCACTTCTAC 477863 Query 98181 GCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAAC 98224 | ||||| ||||| | ||||| || ||||||||| ||||||| Sbjct 477862 GGTTGGAAGAAGGGTTTGAAGACTGGTATGTACTATTTGAGAAC 477819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059088841120