Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1 105 5e-18 seq7 91.5 1e-13 >seq1 Length=3147266 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| ||||| || ||||| ||||| || || || |||||||| ||| Sbjct 843242 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 843183 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | ||||| | || || || ||| | || | | || ||||| ||| Sbjct 843182 AGGGTTCTGCCATCTTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGG 843123 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || || || ||||| ||| ||| ||| || | || ||||| ||| | || || Sbjct 843122 ATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCAACC 843063 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | ||||| || ||||| |||| || || || |||||||||||| Sbjct 843062 TCAAGTGTAATAGTCTTACCGGTCAAGGTCTTCACGAAAATTTGCATA 843015 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| ||||| || |||||||| || || || || |||||||| ||| Sbjct 843470 CCACCTCTCAATCTCAAAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAG 843411 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | ||||| | || || || || | || | | || ||||| ||| Sbjct 843410 AGGGTTCTACCATCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGG 843351 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || || || ||||| || || ||| || | || || |||||| || || Sbjct 843350 ATACCCTCCTTGTCCTGGATCTTAGACTTAACGTTGTCAATAGTATCGGAGGACTCAACC 843291 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | ||||| || ||||| |||| || || || |||||||||||| Sbjct 843290 TCGAGTGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTTGCATA 843243 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || || || ||||| ||||| || || || |||||||| ||| Sbjct 843698 CCACCTCTCAATCTCAACACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAC 843639 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| | || || | || || ||||| | || | | || ||||| |||| Sbjct 843638 AAGGTTCTACCATCCTCAAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGGA 843579 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| ||| || ||| || | || || || || ||| || Sbjct 843578 ATACCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCAATAGTGTCAGAGGATTCAACC 843519 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | ||||| || ||||| |||| || || ||||| || |||||| Sbjct 843518 TCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCATA 843471 >seq7 Length=431226 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| | || || ||||||||||| || || || |||||||| || Sbjct 275144 CCACCTCTCAATCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 275085 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | || || | || || || || | || | | || ||||| ||| Sbjct 275084 AGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGG 275025 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| || ||| ||| ||| | || || || ||| | || || Sbjct 275024 ATACCTTCTTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACC 274965 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 || || || ||||| ||||| || || || || ||||| || ||||| || Sbjct 274964 TCCAAAGTGATGGTCTTACCCGTGAGGGTCTTAACAAAGATCTGCATCTT 274915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362179147031292