Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq7 98.7 8e-16 seq1 87.8 2e-12 >seq7 Length=431226 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || | ||| || | ||| || ||||| ||| |||||| ||||||||||| |||| Sbjct 275145 ACCACCTCTCAATCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGA 275086 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 | || | ||||| |||||||||||| | | || | | |||||| || || Sbjct 275085 AAGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGG 275026 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | || ||| |||||| || || ||||| | | || || |||| |||||| Sbjct 275025 GATACCTTCTTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAAC 274966 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730 ||| | || ||||| ||||| ||||| || || ||||| ||||||||| || Sbjct 274965 CTCCAAAGTGATGGTCTTACCCGTGAGGGTCTTAACAAAGATCTGCATCTTG 274914 >seq1 Length=3147266 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || | ||| || || || || ||||| ||| |||||| || |||||||| || | Sbjct 843243 ACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 843184 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 | || | || || |||||||||||| || | || | | |||||| || || Sbjct 843183 GAGGGTTCTGCCATCTTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGG 843124 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | || ||||||||| ||| || ||||| | ||||| |||| |||||| Sbjct 843123 GATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCAAC 843064 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | ||| || || |||||||| | || ||||| ||||| ||||| Sbjct 843063 CTCAAGTGTAATAGTCTTACCGGTCAAGGTCTTCACGAAAATTTGCAT 843016 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 48496 AAAACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATC 48555 |||||| || | ||| || ||||| || ||||| ||| |||||| ||||||||||| || Sbjct 843702 AAAACCACCTCTCAATCTCAACACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTC 843643 Query 48556 AGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCAC 48615 | ||| || | ||||| ||||||||||| | | || | | |||||| || Sbjct 843642 GGACAAGGTTCTACCATCCTCAAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGG 843583 Query 48616 CGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTC 48675 || | || ||||||||| ||| || ||| | | || || || | || || Sbjct 843582 TGGAATACCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCAATAGTGTCAGAGGATTC 843523 Query 48676 CGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| ||| || || ||||| || | || || ||||| |||||||| Sbjct 843522 AACCTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 843472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421251138392012