Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2 118 2e-22
seq4 114 2e-21
>seq2
Length=2138410
Score = 118 bits (130), Expect = 2e-22
Identities = 176/246 (72%), Gaps = 3/246 (1%)
Strand=Plus/Plus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||||| | |||||||||| || || ||||| |||||||||||| | | ||||| |
Sbjct 1481816 AGATCT-TGAGAGATAACATTCAGGGTATCACTAAGCCAGCTATCAGAAGATTGGCTAGA 1481874
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || |||||| |||||| | |||| |||||| |||||| |||||||||
Sbjct 1481875 AGAGGTGGTGTTAAGCGTATCTCTGCTCTTATCTACGAAGAGGTTCGTGGTGTTTTGAA- 1481933
Query 16568 ATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626
||| ||||| | ||||| ||| || || || || |||||| | || | ||
Sbjct 1481934 ATCTTTCCTTGAACAAGTTATTAGAGATTCTGTCACTTACACTGAGCACTCCAAGAGAAA 1481993
Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGG 16686
|||||| || || | ||| |||| || || ||||| | || || |||| |||| ||
Sbjct 1481994 GACTGTTACATCTCTCGATGTCGTTTACGCTTTGAAGAGACAGGGTCGTACTCTTTACGG 1482053
Query 16687 TTTTGG 16692
||| ||
Sbjct 1482054 TTTCGG 1482059
>seq4
Length=1873953
Score = 114 bits (126), Expect = 2e-21
Identities = 173/245 (71%), Gaps = 1/245 (0%)
Strand=Plus/Plus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||||| | |||||||||| || || ||||| |||||||||||| | | ||||| |
Sbjct 1671544 AGATCT-TGAGAGATAACATTCAGGGTATCACTAAGCCAGCTATCAGAAGATTGGCTAGA 1671602
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || |||||| |||||| | | || ||||| |||||| ||||||||||
Sbjct 1671603 AGAGGTGGTGTTAAGCGTATCTCTGCTCTCATTTACGAAGAAGTTCGTGGTGTTTTGAAG 1671662
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
|||||| | ||||| || || || || || |||||| | || | |||
Sbjct 1671663 TCCTTCCTTGAACAGGTTATTAGAGACTCTGTCACTTACACTGAGCACTCCAAGAGAAAG 1671722
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
||||| ||||| | ||| |||| || || ||||| | || || |||| |||| |||
Sbjct 1671723 ACTGTTACCTCTCTCGATGTCGTTTACGCTTTGAAGAGACAGGGTCGTACTCTTTACGGT 1671782
Query 16688 TTTGG 16692
|| ||
Sbjct 1671783 TTCGG 1671787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075189028316
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |