Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2 118 2e-22 seq4 114 2e-21 >seq2 Length=2138410 Score = 118 bits (130), Expect = 2e-22 Identities = 176/246 (72%), Gaps = 3/246 (1%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||||| | |||||||||| || || ||||| |||||||||||| | | ||||| | Sbjct 1481816 AGATCT-TGAGAGATAACATTCAGGGTATCACTAAGCCAGCTATCAGAAGATTGGCTAGA 1481874 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || |||||| |||||| | |||| |||||| |||||| ||||||||| Sbjct 1481875 AGAGGTGGTGTTAAGCGTATCTCTGCTCTTATCTACGAAGAGGTTCGTGGTGTTTTGAA- 1481933 Query 16568 ATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626 ||| ||||| | ||||| ||| || || || || |||||| | || | || Sbjct 1481934 ATCTTTCCTTGAACAAGTTATTAGAGATTCTGTCACTTACACTGAGCACTCCAAGAGAAA 1481993 Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGG 16686 |||||| || || | ||| |||| || || ||||| | || || |||| |||| || Sbjct 1481994 GACTGTTACATCTCTCGATGTCGTTTACGCTTTGAAGAGACAGGGTCGTACTCTTTACGG 1482053 Query 16687 TTTTGG 16692 ||| || Sbjct 1482054 TTTCGG 1482059 >seq4 Length=1873953 Score = 114 bits (126), Expect = 2e-21 Identities = 173/245 (71%), Gaps = 1/245 (0%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||||| | |||||||||| || || ||||| |||||||||||| | | ||||| | Sbjct 1671544 AGATCT-TGAGAGATAACATTCAGGGTATCACTAAGCCAGCTATCAGAAGATTGGCTAGA 1671602 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || |||||| |||||| | | || ||||| |||||| |||||||||| Sbjct 1671603 AGAGGTGGTGTTAAGCGTATCTCTGCTCTCATTTACGAAGAAGTTCGTGGTGTTTTGAAG 1671662 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 |||||| | ||||| || || || || || |||||| | || | ||| Sbjct 1671663 TCCTTCCTTGAACAGGTTATTAGAGACTCTGTCACTTACACTGAGCACTCCAAGAGAAAG 1671722 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 ||||| ||||| | ||| |||| || || ||||| | || || |||| |||| ||| Sbjct 1671723 ACTGTTACCTCTCTCGATGTCGTTTACGCTTTGAAGAGACAGGGTCGTACTCTTTACGGT 1671782 Query 16688 TTTGG 16692 || || Sbjct 1671783 TTCGG 1671787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075189028316