Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq5 140 3e-28 >seq5 Length=1593029 Score = 140 bits (154), Expect = 3e-28 Identities = 182/252 (72%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 21466 AAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGA 21525 ||||| |||||| ||||| ||| |||||||||||||| | | || || |||||||| Sbjct 293538 AAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGA 293597 Query 21526 AAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCC 21585 || || ||||| ||||| || |||||||| || ||||| || || || ||||| | || Sbjct 293598 GAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACC 293657 Query 21586 TGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTC 21645 || ||||| || || ||||| || ||||| ||||| | || |||||| | | ||| Sbjct 293658 AGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAGGCTTC 293717 Query 21646 TTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATC 21705 || ||| |||||| | ||||| | ||||| | |||||||| ||| || || Sbjct 293718 TTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTC 293777 Query 21706 AATAGCTTTTAA 21717 ||| || || || Sbjct 293778 AATGGCATTAAA 293789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900720214880