Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq6 288 1e-72 seq5 181 1e-40 >seq6 Length=1133955 Score = 288 bits (318), Expect = 1e-72 Identities = 1322/2074 (64%), Gaps = 46/2074 (2%) Strand=Plus/Plus Query 61991 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 62049 |||| ||||| ||||| | ||| || || | | || | | ||||||||| || || | Sbjct 477784 CAATAGTGAACTGAATAGCAGCAGAAGCAGCCTGGGTTCTCAAATAGTACATACCAGTCT 477843 Query 62050 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 62109 | | ||| |||| ||||| || |||||| || | || | | ||| || Sbjct 477844 TCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTTACCCATAGTTGGAGCTC 477903 Query 62110 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 62169 || || || |||| ||||||| |||||| ||||| || | | || |||||||| | Sbjct 477904 TAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAGCACGATCAGCAGCCATAT 477963 Query 62170 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 62228 ||||| |||||||| | ||| ||||||| || || || || || | ||| ||| | Sbjct 477964 CGATGATAGTCTTTTGAGAAATCTCCCAAACGGTCTTGTACAAATCTTTCAATTCCTT-T 478022 Query 62229 GGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCA 62285 |||| ||||| || || ||||| || || ||| | || || | |||| || Sbjct 478023 GGAATGTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGATGATGTGACTCTTCATAGAG 478082 Query 62286 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 62345 |||| ||| | || ||| | | ||| | || || ||||| | || ||| Sbjct 478083 TCATCCCAAACACCCAAATCAACCAAATCACGAAGCAAATATGGGTTAACAATCTGGAAT 478142 Query 62346 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTA 62405 || |||| | || | |||| |||||| ||| || || ||||| | | || || Sbjct 478143 TCACCAGCAAGGACACGACGAGAGTAAATGTTAGAAGTGTATGGTTCGAAACATTCGTTG 478202 Query 62406 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 62465 | ||||| ||||||| ||| || ||||| ||||| || || || | ||| ||||| Sbjct 478203 TAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTGGAGCAACAAGCAAAGAGTTTCTC 478262 Query 62466 AGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG--TA 62523 | |||||| | || | | | || |||| ||||||| ||| | ||| || || | Sbjct 478263 AAACCGTACTTGACAATATCAGCCTTAAGAGTATCCCAATCCCACAAATCGGAAGGCTTT 478322 Query 62524 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 62583 | | || || ||| ||| || || ||| ||| | Sbjct 478323 CTTCCCCAAAGGTCAAAC--TGAAGCTGACCCTTAGAAGCTGGGGAACCTTGGAATGATT 478380 Query 62584 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 62643 ||||||| ||||| || || || ||| | | ||| || ||| ||| |||||||| Sbjct 478381 CGTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACTCCAAAGCAGCGTGATAAATGG 478440 Query 62644 TTTCGAAGATCTTCTTATTTAGATCTTGTGC--TTCCAGGCTATCAAATGGATAATTTAA 62701 | |||||||||| | || | || | || || ||| | ||||||| || || Sbjct 478441 TCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGATT--CAAATGGCAAACGCAA 478498 Query 62702 GAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62761 | ||||| || || ||||| ||||||||||| | | || ||||| | |||| |||| Sbjct 478499 AATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTGGTCTGTTTCTCATATT 478558 Query 62762 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT--- 62818 ||| || ||||||||| | || || || ||| || || ||| | || | || Sbjct 478559 GGAGTTTCTAGCTTCTGGGACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTCTT 478618 Query 62819 TCTGACAA--TT---ACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC-CCATC 62872 | |||||| || | ||||| | | |||| | | || | | | ||||| Sbjct 478619 TGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAGTCTGAGTGGTACCATC 478678 Query 62873 TA------TTACAAACAT-GTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTC 62923 | || ||| | | | ||| |||| || |||| |||||||| || || || Sbjct 478679 AAGGGATTTTTCAATGAAAGCTGGCAATGCAATGGAGGCCAAGTTACAAACAGCAACTTC 478738 Query 62924 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAA 62983 | | || | |||| | |||||| || | ||| | ||||||| | || || Sbjct 478739 TTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAGAAGACTTGATCATACCCAA 478798 Query 62984 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 63043 || | || ||| |||| | |||||| |||||||| ||||| ||||||||||||||||| Sbjct 478799 GTTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAAGCATGAATGGAGTACCAGT 478858 Query 63044 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA 63103 ||| |||| | || | || || | ||| | | ||||||| | | ||| || Sbjct 478859 CTCAGTCTGGGCATCAAGGATTGCATACCACAACTTTTGAGCCTTGACAGTC--TTTCTA 478916 Query 63104 TCTCCTTTCTCTTTCGTATAGTGT--ATACA-ATCGTTCGAACTCGTCTCCCCAAACATT 63160 | | |||||| ||| | ||| | | | || ||| || || || || || | Sbjct 478917 CCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTT-GAATTCATCACCATAA-CAGT 478974 Query 63161 GTCCAAT-CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTC 63219 ||| || || ||||| ||| | | ||| | ||| || || | | | || | Sbjct 478975 CAGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCATTCACCATTAGATTCAACAC 479034 Query 63220 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCT 63279 ||| ||| || | |||||| ||||| | ||| || | ||| | | ||| || | Sbjct 479035 GTTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTGATCTCTT 479094 Query 63280 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 63339 | || || ||||||| ||| |||| ||| | | ||||| | ||||| ||||||| Sbjct 479095 CTTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCATGGTTCCA 479154 Query 63340 AGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 63399 | || | ||| | | ||||| | ||||| || || || || | ||| | ||| |||| Sbjct 479155 AATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGT 479214 Query 63400 TATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATAT 63459 | ||| | || | | ||||||||| | |||||| || |||| || ||||| | || | Sbjct 479215 TGTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCAGCAATGT 479274 Query 63460 AGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGA 63519 | || | || | || ||| || || ||| || || || || | || |||| Sbjct 479275 AAGAGCCTGTAGCTCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTCTTGGAGA 479334 Query 63520 TTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAA 63579 | || || ||| |||| || || |||||||||||||| ||| ||| || |||| | Sbjct 479335 TCAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTCATAGCCA 479394 Query 63580 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 63639 || ||||| ||||| || | | || || || || || || || ||||||| Sbjct 479395 CAAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTTGGAGAAG 479454 Query 63640 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCC 63699 |||| || || || | ||||| | || || || ||||||||| |||| | ||||| | Sbjct 479455 CGTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGTCTCAATAACTGATTTAATATCTC 479514 Query 63700 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 63759 ||| || || | ||||| | ||| | || ||||| || | |||| ||| || Sbjct 479515 TACCATGGATACCGATAGCGACTCTCATGATCAAATGCTGTGGACGTTCAGCGACTTTAC 479574 Query 63760 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 63817 || | ||||||||| ||| | ||||| || || |||||||| ||||| || ||| Sbjct 479575 CATTAACACGCAACAAGTAAGATCTCTCCAATGTCTTGAAACCAAAGTAGTTATAGTTGA 479634 Query 63818 AAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATC 63877 || |||| ||||| || || | |||| | | || || | | | ||| || | Sbjct 479635 AA--TCTCTATCGTAGATGATGGCAGAGTCCAACTCGTCTTTGAACTCTTGAACAATGT- 479691 Query 63878 CATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGA 63936 ||| | ||| || | ||||||||||| | | || || |||| |||||| Sbjct 479692 CATAAGTTTCCTTAGACAACATCGGAGAATGGAGATCGGTCTTTGGGTTAATGTAGTTGT 479751 Query 63937 ATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGG 63996 | | || || | || | || |||| | |||| ||| || | ||| || | || Sbjct 479752 AAAGCTCTTCGACAACAGAAGAGAACTGTTTAGTGGTTTGCTTATGCAAATTAGAGATGG 479811 Query 63997 CTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030 | ||||| || |||| | | ||||| || ||||| Sbjct 479812 CAATTCTAGCAGCTAAAGTAGCATAGTCTGGATG 479845 >seq5 Length=1593029 Score = 181 bits (200), Expect = 1e-40 Identities = 406/606 (67%), Gaps = 8/606 (1%) Strand=Plus/Plus Query 33286 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGT 33345 ||||| ||||| |||||| || || || ||||| ||| || || | | ||| | Sbjct 293530 AAATGAGCAAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAAC 293589 Query 33346 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33405 || || || || || | || ||||| | || | ||| || | ||| || || || || Sbjct 293590 TCATTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCA 293649 Query 33406 AATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA 33465 || || ||||| |||||||| ||||| || || |||||||||| ||||||||| || | Sbjct 293650 AAGGAACCAGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAAC 293709 Query 33466 CCGGCGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 33522 ||| |||| ||||| | ||||||||| |||||||| || | ||| || Sbjct 293710 AAGGCTTCTTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGA 293769 Query 33523 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCG 33582 || || || ||||||||||| | ||| | | | ||| || | |||||| || Sbjct 293770 ATAGTCTCAATGGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCA 293829 Query 33583 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 33642 ||||| ||| || | || || |||||||| || || || || || ||||||||| Sbjct 293830 ATCAAGAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAA 293889 Query 33643 CATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACT 33702 || |||| || | ||| || || || | | | || || |||| || ||||| || Sbjct 293890 CACTTAGCTTCTGGAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACG 293949 Query 33703 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT-AAAATATTTTTCGTCTGG 33761 || |||||| || ||||| || || | ||| | || || | | || ||| Sbjct 293950 ATACCGTCAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCTCA 294009 Query 33762 TGTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCA 33818 | | | | || |||||||||| | ||| ||||| | ||| | || || | ||||| Sbjct 294010 T-TCAATCTGTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCCA 294068 Query 33819 AAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAAT 33878 || || || || ||||| || || | |||||| |||| || | ||||||||||| Sbjct 294069 GAAAGAAGCTTCAGCCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAAAAG 294128 Query 33879 AACAAA 33884 |||||| Sbjct 294129 AACAAA 294134 Score = 176 bits (194), Expect = 6e-39 Identities = 605/922 (66%), Gaps = 36/922 (4%) Strand=Plus/Plus Query 62628 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 62687 ||||| | ||| |||||||| ||||||| || || || | | || | |||| ||| Sbjct 213671 GCACCATGATACATGGTTTCAAAGATCTCTTTGTTAAGTTTGCGAGCCTGAGGGCTGTCA 213730 Query 62688 AATGGATAATTTAAGAGA-ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGG 62746 ||||| ||| | | || || || ||| || | ||||||||| |||||| | || || Sbjct 213731 AATGGCAAATGGA-GTGACATGAATAAGTCAGCAAGTCCTTGAACTCCAATAGCAATTGG 213789 Query 62747 TCTATGTCTC---TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTAT 62803 | ||| || ||| | || || || ||||| | || || | || ||| || Sbjct 213790 ACGGTGTTTCAAGTTACTTGAC---TCCGCCTCTGGTGTTGGGTAGATACCAACATCGAT 213846 Query 62804 AATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC-AA 62862 || || || ||||| || | ||||||||| ||| | |||||| || ||| || Sbjct 213847 AACCTTGTTCAGATTCTTGGTCAATACTTTGACGACAGAGTGTAGTTTGTGATGATCGAA 213906 Query 62863 ATC--GCCCAT-----------CTA--TTACAAACATGTTC-AAG-GCAACAGATGCCAG 62905 | | | ||| || || ||| | ||| ||| |||||||| |||| Sbjct 213907 AACAAGTTCATTATCAACTTCACTTCGTTTCAAGAAAGTTGGAAGAGCAACAGAGGCCAA 213966 Query 62906 ATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACT 62965 ||||||||||| ||| | || | ||||| | | ||| || | || Sbjct 213967 GTTACAAACGGCAGTCTCTTCAGGTGATGAGTATTGAACCACTTCACAACACAAGTTCGA 214026 Query 62966 ACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAG 63025 ||||||| || || ||||| | |||||||||||| | ||||| ||||||||||| || Sbjct 214027 GGACTTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAG 214086 Query 63026 AATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAG 63084 ||||| ||| ||||||||||| ||||| || | || | | ||| | | || ||| Sbjct 214087 CATGAAAGGACCACCAGTTTCAACTTGAGACTCCAAGATTGAGTGCCATAACTTCT-GAG 214145 Query 63085 CCTTTATTATAGA-TTTGTATCTCCTTTCTCTTTCGTATAGTGT-ATACAATCGTTCGAA 63142 |||| || | |||| ||||| || | || ||| ||| ||||| | | | || Sbjct 214146 CCTTAATCTTCTTCTTTGCCAATCCTTCCT-TCTCATATT-TGTGATACAGTTGAACAAA 214203 Query 63143 CTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTC 63202 | || || | | | | ||| |||||| ||||| |||| | ||| |||| || Sbjct 214204 TGCATCACCATACATCTCATTCAAACCAGGAGCATCATCTGGACTAAACAAGCACCATTC 214263 Query 63203 TCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGAT 63261 | | || | || ||| || ||| || ||||| || ||||| ||||| ||| || | || Sbjct 214264 TTCATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGC-ATAGAACAAAT 214322 Query 63262 CTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTT-TTAAGATCGAGGAACGCCATAATA 63320 | | | ||| || || ||||| |||||| ||||| | || || |||| | | Sbjct 214323 CACGAGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAAT-CCATCACA 214381 Query 63321 TCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGA 63380 |||| |||||| |||||||| || ||||| | | || || | || || || || ||| Sbjct 214382 TCAGCATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGA 214441 Query 63381 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATA 63440 || | ||||| || ||||||||| | ||||| | ||| || | ||||||||||| || Sbjct 214442 TCAACATATCTTGCAGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGAAGTA 214501 Query 63441 CCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATT 63500 ||||| | |||| || || ||| ||| | ||| ||| || |||||| || Sbjct 214502 CCATTTGATCCGGCAATGTATGCACCAGTGGATCTAATGTTAGATATATGTAGACCGATA 214561 Query 63501 CCCCCTGCCATTTTAGAGATTA 63522 || || || || ||||||| Sbjct 214562 CCACCAGCAGCCTTCGAGATTA 214583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947106557920