Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq6 277 2e-69 seq5 154 2e-32 >seq6 Length=1133955 Score = 277 bits (306), Expect = 2e-69 Identities = 1205/1888 (64%), Gaps = 42/1888 (2%) Strand=Plus/Plus Query 61846 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 61904 |||| ||||| ||||| | ||| || || | | || | | ||||||||| || || | Sbjct 477784 CAATAGTGAACTGAATAGCAGCAGAAGCAGCCTGGGTTCTCAAATAGTACATACCAGTCT 477843 Query 61905 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 61964 | | ||| |||| ||||| || |||||| || | || | | ||| || Sbjct 477844 TCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTTACCCATAGTTGGAGCTC 477903 Query 61965 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 62024 || || || |||| ||||||| |||||| ||||| || | | || |||||||| | Sbjct 477904 TAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAGCACGATCAGCAGCCATAT 477963 Query 62025 TTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 62083 || || |||||||| | ||| ||||||| || || || || || | ||| ||| | Sbjct 477964 CGATGATAGTCTTTTGAGAAATCTCCCAAACGGTCTTGTACAAATCTTTCAATTCCTT-T 478022 Query 62084 GGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCA 62140 |||| ||||| || || ||||| || || ||| | || || | |||| || Sbjct 478023 GGAATGTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGATGATGTGACTCTTCATAGAG 478082 Query 62141 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 62200 |||| ||| | || ||| | | ||| | || || ||||| | || ||| Sbjct 478083 TCATCCCAAACACCCAAATCAACCAAATCACGAAGCAAATATGGGTTAACAATCTGGAAT 478142 Query 62201 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTA 62260 || |||| | || | |||| |||||| ||| || || ||||| | | | || || Sbjct 478143 TCACCAGCAAGGACACGACGAGAGTAAATGTTAGAAGTGTATGGTTCGAAACATTCGTTG 478202 Query 62261 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 62320 | ||||| ||||||| ||| || ||||| ||||| || || || | ||| ||||| Sbjct 478203 TAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTGGAGCAACAAGCAAAGAGTTTCTC 478262 Query 62321 AGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG--TA 62378 | |||||| | || | | | || |||| ||||||| ||| | ||| || || | Sbjct 478263 AAACCGTACTTGACAATATCAGCCTTAAGAGTATCCCAATCCCACAAATCGGAAGGCTTT 478322 Query 62379 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 62438 | | || || ||| ||| || || ||| ||| | Sbjct 478323 CTTCCCCAAAGGTCAAAC--TGAAGCTGACCCTTAGAAGCTGGGGAACCTTGGAATGATT 478380 Query 62439 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 62498 ||||||| ||||| || || || ||| | | ||| || ||| ||| |||||||| Sbjct 478381 CGTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACTCCAAAGCAGCGTGATAAATGG 478440 Query 62499 TTTCGAAGATCTTCTTATTTAGATCTTGCGC--TTCCAGGCTATCAAATGGATAATTTAA 62556 | |||||||||| | || | || | || || ||| | ||||||| || || Sbjct 478441 TCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGATT--CAAATGGCAAACGCAA 478498 Query 62557 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62616 | ||||| || || ||||| ||||||||||| | | || ||||| | |||| |||| Sbjct 478499 AATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTGGTCTGTTTCTCATATT 478558 Query 62617 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT--- 62673 ||| || ||||||||| | || || || ||| || || ||| | || | || Sbjct 478559 GGAGTTTCTAGCTTCTGGGACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTCTT 478618 Query 62674 TCTGACAA--TT---ACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC-CCATC 62727 | |||||| || | ||||| | | |||| | | || | | | ||||| Sbjct 478619 TGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAGTCTGAGTGGTACCATC 478678 Query 62728 TA------TTACAAACAT-GTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCTC 62778 | || ||| | | | |||||||| || |||| |||||||| || || || Sbjct 478679 AAGGGATTTTTCAATGAAAGCTGGCAATGCAATGGAGGCCAAGTTACAAACAGCAACTTC 478738 Query 62779 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 62838 | | || | |||| | |||||| || | ||| | ||||||| | || || Sbjct 478739 TTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAGAAGACTTGATCATACCCAA 478798 Query 62839 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 62898 || | || ||| |||| | |||||| |||||||| ||||| ||||||||||||||||| Sbjct 478799 GTTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAAGCATGAATGGAGTACCAGT 478858 Query 62899 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA 62958 ||| |||| | || | || || | ||| | | ||||||| | | ||| || Sbjct 478859 CTCAGTCTGGGCATCAAGGATTGCATACCACAACTTTTGAGCCTTGACAGTC--TTTCTA 478916 Query 62959 TCTCTTTTCTCTTTCGTATAGTGT--ATACA-ATCGTTCGAACTCGTCTCCCCAAACATT 63015 | | |||||| ||| | ||| | | | || ||| || || || || | Sbjct 478917 CCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTT-GAATTCATCACCATAACAGTC 478975 Query 63016 GTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 63075 | || || || ||||| ||| | | ||| | ||| || || | | | || || Sbjct 478976 AGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCATTCACCATTAGATTCAACACG 479035 Query 63076 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTC 63135 || ||| || | |||||| ||||| | ||| || | ||| | | ||| || || Sbjct 479036 TTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTGATCTCTTC 479095 Query 63136 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 63195 || || ||||||| ||| |||| ||| | | ||||| | ||||| |||||||| Sbjct 479096 TTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCATGGTTCCAA 479155 Query 63196 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 63255 || | ||| | | ||||| | ||||| || || || || | ||| | ||| ||||| Sbjct 479156 ATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTT 479215 Query 63256 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATA 63315 ||| | || | | ||||||||| | ||| || || ||||| || || || | || || Sbjct 479216 GTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCAGCAATGTA 479275 Query 63316 GCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 63375 || | || | || ||| || || ||| || || || || | || ||||| Sbjct 479276 AGAGCCTGTAGCTCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTCTTGGAGAT 479335 Query 63376 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 63435 || || ||| |||| || || |||||||| ||||| || ||| || |||| | Sbjct 479336 CAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTCATAGCCAC 479395 Query 63436 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63495 || ||||| ||||| || | | || || || || || || || |||||||| Sbjct 479396 AAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTTGGAGAAGC 479455 Query 63496 GTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 63555 ||| || || || | ||||| | || || || ||||||||| |||| | ||||| | Sbjct 479456 GTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGTCTCAATAACTGATTTAATATCTCT 479515 Query 63556 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 63615 ||| || || | ||||| | ||| | || ||||| || | |||| ||| || Sbjct 479516 ACCATGGATACCGATAGCGACTCTCATGATCAAATGCTGTGGACGTTCAGCGACTTTACC 479575 Query 63616 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAA 63673 || | ||||||||| ||| | ||||| || || |||||||| ||||| || |||| Sbjct 479576 ATTAACACGCAACAAGTAAGATCTCTCCAATGTCTTGAAACCAAAGTAGTTATAGTTGAA 479635 Query 63674 AAGTCTCGTTCGTAAATAATAACCGAGT 63701 | |||| ||||| || || | |||| Sbjct 479636 A--TCTCTATCGTAGATGATGGCAGAGT 479661 >seq5 Length=1593029 Score = 154 bits (170), Expect = 2e-32 Identities = 332/483 (69%), Gaps = 10/483 (2%) Strand=Plus/Plus Query 62823 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 62882 ||||||| || || ||||| | |||||||||||| | ||||| ||||||||||| || | Sbjct 214029 ACTTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAGCA 214088 Query 62883 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA-GACGACTCGAGCC 62941 |||| ||| ||||||||||| ||||| || | || | | ||| || || ||||| Sbjct 214089 TGAAAGGACCACCAGTTTCAACTTGAGACTCCAAGATTGAGTGCCATAACTTCT-GAGCC 214147 Query 62942 TTTAT-TATAGATTTGTATCTCTTTTCTCTTTCGTA-TAGTGTATACAATCGTTCGAACT 62999 || || | |||| || || || | || || | ||| ||||| | | | || Sbjct 214148 TTAATCTTCTTCTTTGCCAATCCTTCCT-TCTCATATTTGTG-ATACAGTTGAACAAATG 214205 Query 63000 CGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTC 63059 | || || | | | | || |||||| ||||| |||| | ||| |||| ||| Sbjct 214206 CATCACCATACATCTCATTCAAACCAGGAGCATCATCTGGACTAAACAAGCACCATTCTT 214265 Query 63060 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCT 63118 | || | || ||| || ||| || ||||| || ||||| ||||| ||| || | ||| Sbjct 214266 CATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGC-ATAGAACAAATCA 214324 Query 63119 CTGGTTCTATGTTCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCATAATATC 63177 | | ||| || || ||||| |||||| ||||| | | ||| |||| | ||| Sbjct 214325 CGAGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAG-TTTAAGAAATCCATCACATC 214383 Query 63178 AGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATC 63237 || |||||| |||||||| || ||||| | | || || | || || || || ||||| Sbjct 214384 AGCATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGATC 214443 Query 63238 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACC 63297 | ||||| || ||||||||| | ||||| | ||| || | ||||| || || ||||| Sbjct 214444 AACATATCTTGCAGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGAAGTACC 214503 Query 63298 ATT 63300 ||| Sbjct 214504 ATT 214506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631904955200