Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq6 277 2e-69
seq5 154 2e-32
>seq6
Length=1133955
Score = 277 bits (306), Expect = 2e-69
Identities = 1205/1888 (64%), Gaps = 42/1888 (2%)
Strand=Plus/Plus
Query 61846 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 61904
|||| ||||| ||||| | ||| || || | | || | | ||||||||| || || |
Sbjct 477784 CAATAGTGAACTGAATAGCAGCAGAAGCAGCCTGGGTTCTCAAATAGTACATACCAGTCT 477843
Query 61905 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 61964
| | ||| |||| ||||| || |||||| || | || | | ||| ||
Sbjct 477844 TCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTTACCCATAGTTGGAGCTC 477903
Query 61965 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 62024
|| || || |||| ||||||| |||||| ||||| || | | || |||||||| |
Sbjct 477904 TAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAGCACGATCAGCAGCCATAT 477963
Query 62025 TTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 62083
|| || |||||||| | ||| ||||||| || || || || || | ||| ||| |
Sbjct 477964 CGATGATAGTCTTTTGAGAAATCTCCCAAACGGTCTTGTACAAATCTTTCAATTCCTT-T 478022
Query 62084 GGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCA 62140
|||| ||||| || || ||||| || || ||| | || || | |||| ||
Sbjct 478023 GGAATGTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGATGATGTGACTCTTCATAGAG 478082
Query 62141 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 62200
|||| ||| | || ||| | | ||| | || || ||||| | || |||
Sbjct 478083 TCATCCCAAACACCCAAATCAACCAAATCACGAAGCAAATATGGGTTAACAATCTGGAAT 478142
Query 62201 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTA 62260
|| |||| | || | |||| |||||| ||| || || ||||| | | | || ||
Sbjct 478143 TCACCAGCAAGGACACGACGAGAGTAAATGTTAGAAGTGTATGGTTCGAAACATTCGTTG 478202
Query 62261 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 62320
| ||||| ||||||| ||| || ||||| ||||| || || || | ||| |||||
Sbjct 478203 TAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTGGAGCAACAAGCAAAGAGTTTCTC 478262
Query 62321 AGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG--TA 62378
| |||||| | || | | | || |||| ||||||| ||| | ||| || || |
Sbjct 478263 AAACCGTACTTGACAATATCAGCCTTAAGAGTATCCCAATCCCACAAATCGGAAGGCTTT 478322
Query 62379 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 62438
| | || || ||| ||| || || ||| ||| |
Sbjct 478323 CTTCCCCAAAGGTCAAAC--TGAAGCTGACCCTTAGAAGCTGGGGAACCTTGGAATGATT 478380
Query 62439 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 62498
||||||| ||||| || || || ||| | | ||| || ||| ||| ||||||||
Sbjct 478381 CGTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACTCCAAAGCAGCGTGATAAATGG 478440
Query 62499 TTTCGAAGATCTTCTTATTTAGATCTTGCGC--TTCCAGGCTATCAAATGGATAATTTAA 62556
| |||||||||| | || | || | || || ||| | ||||||| || ||
Sbjct 478441 TCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGATT--CAAATGGCAAACGCAA 478498
Query 62557 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62616
| ||||| || || ||||| ||||||||||| | | || ||||| | |||| ||||
Sbjct 478499 AATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTGGTCTGTTTCTCATATT 478558
Query 62617 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT--- 62673
||| || ||||||||| | || || || ||| || || ||| | || | ||
Sbjct 478559 GGAGTTTCTAGCTTCTGGGACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTCTT 478618
Query 62674 TCTGACAA--TT---ACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC-CCATC 62727
| |||||| || | ||||| | | |||| | | || | | | |||||
Sbjct 478619 TGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAGTCTGAGTGGTACCATC 478678
Query 62728 TA------TTACAAACAT-GTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCTC 62778
| || ||| | | | |||||||| || |||| |||||||| || || ||
Sbjct 478679 AAGGGATTTTTCAATGAAAGCTGGCAATGCAATGGAGGCCAAGTTACAAACAGCAACTTC 478738
Query 62779 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 62838
| | || | |||| | |||||| || | ||| | ||||||| | || ||
Sbjct 478739 TTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAGAAGACTTGATCATACCCAA 478798
Query 62839 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 62898
|| | || ||| |||| | |||||| |||||||| ||||| |||||||||||||||||
Sbjct 478799 GTTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAAGCATGAATGGAGTACCAGT 478858
Query 62899 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA 62958
||| |||| | || | || || | ||| | | ||||||| | | ||| ||
Sbjct 478859 CTCAGTCTGGGCATCAAGGATTGCATACCACAACTTTTGAGCCTTGACAGTC--TTTCTA 478916
Query 62959 TCTCTTTTCTCTTTCGTATAGTGT--ATACA-ATCGTTCGAACTCGTCTCCCCAAACATT 63015
| | |||||| ||| | ||| | | | || ||| || || || || |
Sbjct 478917 CCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTT-GAATTCATCACCATAACAGTC 478975
Query 63016 GTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 63075
| || || || ||||| ||| | | ||| | ||| || || | | | || ||
Sbjct 478976 AGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCATTCACCATTAGATTCAACACG 479035
Query 63076 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTC 63135
|| ||| || | |||||| ||||| | ||| || | ||| | | ||| || ||
Sbjct 479036 TTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTGATCTCTTC 479095
Query 63136 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 63195
|| || ||||||| ||| |||| ||| | | ||||| | ||||| ||||||||
Sbjct 479096 TTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCATGGTTCCAA 479155
Query 63196 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 63255
|| | ||| | | ||||| | ||||| || || || || | ||| | ||| |||||
Sbjct 479156 ATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTT 479215
Query 63256 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATA 63315
||| | || | | ||||||||| | ||| || || ||||| || || || | || ||
Sbjct 479216 GTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCAGCAATGTA 479275
Query 63316 GCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 63375
|| | || | || ||| || || ||| || || || || | || |||||
Sbjct 479276 AGAGCCTGTAGCTCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTCTTGGAGAT 479335
Query 63376 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 63435
|| || ||| |||| || || |||||||| ||||| || ||| || |||| |
Sbjct 479336 CAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTCATAGCCAC 479395
Query 63436 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63495
|| ||||| ||||| || | | || || || || || || || ||||||||
Sbjct 479396 AAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTTGGAGAAGC 479455
Query 63496 GTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 63555
||| || || || | ||||| | || || || ||||||||| |||| | ||||| |
Sbjct 479456 GTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGTCTCAATAACTGATTTAATATCTCT 479515
Query 63556 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 63615
||| || || | ||||| | ||| | || ||||| || | |||| ||| ||
Sbjct 479516 ACCATGGATACCGATAGCGACTCTCATGATCAAATGCTGTGGACGTTCAGCGACTTTACC 479575
Query 63616 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAA 63673
|| | ||||||||| ||| | ||||| || || |||||||| ||||| || ||||
Sbjct 479576 ATTAACACGCAACAAGTAAGATCTCTCCAATGTCTTGAAACCAAAGTAGTTATAGTTGAA 479635
Query 63674 AAGTCTCGTTCGTAAATAATAACCGAGT 63701
| |||| ||||| || || | ||||
Sbjct 479636 A--TCTCTATCGTAGATGATGGCAGAGT 479661
>seq5
Length=1593029
Score = 154 bits (170), Expect = 2e-32
Identities = 332/483 (69%), Gaps = 10/483 (2%)
Strand=Plus/Plus
Query 62823 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 62882
||||||| || || ||||| | |||||||||||| | ||||| ||||||||||| || |
Sbjct 214029 ACTTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAGCA 214088
Query 62883 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA-GACGACTCGAGCC 62941
|||| ||| ||||||||||| ||||| || | || | | ||| || || |||||
Sbjct 214089 TGAAAGGACCACCAGTTTCAACTTGAGACTCCAAGATTGAGTGCCATAACTTCT-GAGCC 214147
Query 62942 TTTAT-TATAGATTTGTATCTCTTTTCTCTTTCGTA-TAGTGTATACAATCGTTCGAACT 62999
|| || | |||| || || || | || || | ||| ||||| | | | ||
Sbjct 214148 TTAATCTTCTTCTTTGCCAATCCTTCCT-TCTCATATTTGTG-ATACAGTTGAACAAATG 214205
Query 63000 CGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTC 63059
| || || | | | | || |||||| ||||| |||| | ||| |||| |||
Sbjct 214206 CATCACCATACATCTCATTCAAACCAGGAGCATCATCTGGACTAAACAAGCACCATTCTT 214265
Query 63060 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCT 63118
| || | || ||| || ||| || ||||| || ||||| ||||| ||| || | |||
Sbjct 214266 CATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGC-ATAGAACAAATCA 214324
Query 63119 CTGGTTCTATGTTCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCATAATATC 63177
| | ||| || || ||||| |||||| ||||| | | ||| |||| | |||
Sbjct 214325 CGAGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAG-TTTAAGAAATCCATCACATC 214383
Query 63178 AGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATC 63237
|| |||||| |||||||| || ||||| | | || || | || || || || |||||
Sbjct 214384 AGCATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGATC 214443
Query 63238 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACC 63297
| ||||| || ||||||||| | ||||| | ||| || | ||||| || || |||||
Sbjct 214444 AACATATCTTGCAGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGAAGTACC 214503
Query 63298 ATT 63300
|||
Sbjct 214504 ATT 214506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631904955200
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