Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq4 89.7 1e-12
>seq4
Length=1873953
Score = 89.7 bits (98), Expect = 1e-12
Identities = 181/263 (69%), Gaps = 8/263 (3%)
Strand=Plus/Minus
Query 279706 TGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGATG 279765
|||| ||||||||||||||||| ||||||| || | ||| | | | || |||
Sbjct 1732218 TGTCTGGTGGTTGGAAGATGAAATTGGCCCTTGCTAGAGCCGTCTTGAAGAACGCTGATA 1732159
Query 279766 TCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTGT 279825
|| | |||| ||||||||||| ||||| |||| ||| ||||| || ||| | ||
Sbjct 1732158 TCTTGTTGCTCGATGAGCCAACTAACCATTTGGATACCGTTAACGTTGCTTGGTTGGTTA 1732099
Query 279826 CCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTCC 279885
|||| | | || | || | | | ||||| ||||||| || ||||||||||| |||
Sbjct 1732098 ACTACTTGAACACT-TGTGG--TATCTCTTCTATCATTGTTTCCCACGACTCTGGTTTCT 1732042
Query 279886 TAGATGCCGTGTGCTCTG-CCATCATTCACTATGAGCAAAATCTGAAGCTCTCCAAGCAC 279944
| || ||| || || | ||| || ||||| ||| | | ||| | ||| ||
Sbjct 1732041 TGGACAACGT-TGTTCAGTACATTATCCACTACGAG---GGTTTCAAGTTGAGAAAGTAC 1731986
Query 279945 ATCGGCAACCTGTCTGCTTTCGT 279967
| || ||||| |||||||||||
Sbjct 1731985 AAGGGTAACCTTTCTGCTTTCGT 1731963
Score = 87.8 bits (96), Expect = 4e-12
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|||||||| || ||| ||||||| ||||| ||||| || |||| ||||| || | |||
Sbjct 1732573 GGTGAGGACCTCTGTAACTGTGAGTTCTCCCTCGCTTACGGTGCTAAGATCTTGTTGAAC 1732514
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| | | | | ||| | || | | || |||||| ||||| || || ||
Sbjct 1732513 AAGACTCAGTTGAGATTGAAGAGAGGTAGAAGATACGGTCTCTGTGGTCCAAACGGTGCT 1732454
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|||||| |||| | ||| | |||||||| ||||||||| | || || ||||| ||| ||
Sbjct 1732453 GGTAAGTCCACTTTGATGAGAGCCATTGCCAACGGTCAGGTTGAGGG-TTTCCCAACCCA 1732395
Query 279525 TCTGAGGTAAGG-ACAGTGTATGTAGAGCACGACATCGAC 279563
| || | || || || || ||||||||||| |||
Sbjct 1732394 GGAGGAGTGTCGTACCGTTTACGTCGAGCACGACATTGAC 1732355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836641970092
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |