Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq5 165 2e-35 >seq5 Length=1593029 Score = 165 bits (182), Expect = 2e-35 Identities = 560/856 (65%), Gaps = 26/856 (3%) Strand=Plus/Minus Query 42285 ATCGAGCACCAGGACATCTGGTCCATG--TACAAGAAGGC-GCAGTTCTCCAACTGGACC 42341 ||| || |||| || |||||| || | ||||||||||| | || | || ||||||| Sbjct 294119 ATCAAGTACCATGAGATCTGG--CAGGCATACAAGAAGGCTGAAGCT-TCTTTCTGGACC 294063 Query 42342 GCCGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCAC----TGTCTGAGAA 42397 || ||||||||||| || | ||||| | | | | ||| || || |||||| Sbjct 294062 GCTGAGGAGATTGATTTGTCTAAGGATTTG-CATGATTGGAACAACAGATTGAATGAGAA 294004 Query 42398 CGAAAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAA 42457 ||| || ||| || | || |||||||| ||||| |||||||| || || || Sbjct 294003 TGAACGTTTCTTCATCTCTCGTGTTCTTGCCTTCTTTGCCGCTTCTGACGGTATCGTTAA 293944 Query 42458 TGAGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGC--TGCTTC 42515 ||||||| ||| | ||| |||||||| | || || || || ||| Sbjct 293943 TGAGAACTTGGTTGAGAACTTCTCTGCCGAGGTGCA--AATTCCAGAAGCTAAGTGTTTC 293886 Query 42516 TACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAAC 42575 ||||| ||||| || || |||||| | ||||||||| ||| | || | || Sbjct 293885 TACGGTTTCCAAATCATGATGGAGAACATTCACTCTGAGACATACTCTCTCTTGATTGAC 293826 Query 42576 ACGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCC 42635 || || ||| |||||| || | | |||| || ||||| ||||| || || Sbjct 293825 ACTTATATCAAGGATCCACAACAGGCTGAGTATTTGTTTAATGCCATTGAGACTATTCCA 293766 Query 42636 TGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTC 42695 || || ||||||||||| || ||||| | | ||||| | | || || |||| Sbjct 293765 TGTATTAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCCGATGAAGAAGCCTTGTTC 293706 Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || ||||| || || |||||| |||| || || || ||||||||||| || |||| ||| Sbjct 293705 GGTGAGAGACTTGTTGCCTTTGCCGCTGTTGAAGGTATCTTCTTCTCTGGTTCCTTTGCC 293646 Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814 || || |||||| | ||| ||| |||| | |||||| || | || ||||| || || | Sbjct 293645 TCTATTTTCTGGTTGAAGAAGAGAGGTTT-GATGCCAGGTTTGACTTTCTCTAATGAGTT 293587 Query 42815 CATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCT 42874 || || | || || || |||| | ||||||||||| | |||| | || | Sbjct 293586 GATTTGCCGTGATGAAGGTTTGCACACTGACTTTGCCTGTTTGTTGTTTGC---TCATTT 293530 Query 42875 CAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGA 42934 | | ||||||| || ||| || | || || || || || || ||||| || Sbjct 293529 GAAGAACAAGCCATCTTCTGAGATTGTGGAGAAGATTATTACTGAAGCTGTTGAGATTGA 293470 Query 42935 GAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCAT 42994 |||| | | || | | || || | || || |||| |||||| | | || || Sbjct 293469 ATCTGAGTACTTTACCGATGCTCTTCCAGCTTCTTTGCTCGGTATGAACGCCAAGCTTAT 293410 Query 42995 -GTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT--GTGCCAGATGGGTCTCAGCCG 43051 || ||| ||| | |||| | || || | ||| || |||| | ||| || Sbjct 293409 GGTTCAA-TACGTTCAGTTCTGTGCTGATCGTCTTCTTATTGCC--CTTGGTAACAAGAA 293353 Query 43052 CCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGAC 43111 |||||||| | ||| |||||||||||||||||||| || |||| || ||||| Sbjct 293352 GTTCTACAACGTTTCTAACCCATTCGACTTTATGGAGAACATTTCCTTGGCTGGTAAGAC 293293 Query 43112 CAACTTTTTCGAGAAG 43127 ||||| || |||||| Sbjct 293292 TAACTTCTTTGAGAAG 293277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339058349120