Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq6 194 2e-44 seq5 107 2e-18 >seq6 Length=1133955 Score = 194 bits (214), Expect = 2e-44 Identities = 737/1141 (65%), Gaps = 37/1141 (3%) Strand=Plus/Plus Query 114110 TCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCA 114169 |||||||| || ||| | || ||||| || || | |||| |||||||| || || Sbjct 478335 TCAAACTGAAGCTGACCCTTAGAAGCTGGGGAACCTTGGAATGATTCGTATGGACCTTCG 478394 Query 114170 ACCTCCGCCAATTCG-GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCG 114228 || || | || ||| | ||| | || |||||||| || ||||| || || | Sbjct 478395 GACTTGGCGAGCTCAAGAGAG-GACTCCAAAGCAGCGTGATAAATGGTCTCGAAGATCTG 478453 Query 114229 AGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATC 114288 | |||| | |||| |||| || || ||||| | | || | | ||||| |||| Sbjct 478454 AATGTTCAATTCCTTAGCCTTTTCAGATTCAAATGGCAAACGCAAAATCATAAAGGCATC 478513 Query 114289 CGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGT 114348 || | |||||| ||||||||| ||||||| | | ||||||||| || |||| ||| | Sbjct 478514 AGCTAAACCTTGAACACCGAGGGCAATTGGTCTGTTTCTCATATTGGAGTTTCTAGCT-T 478572 Query 114349 CTCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTG 114407 || || || || | || | || || | || || | || || ||||||||||| | Sbjct 478573 CTGGGACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTCTTTGTGACAACCTTGG 478632 Query 114408 TGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTC---------------TCTTCAT 114452 |||| ||| | ||| | | | || | |||| | |||| Sbjct 478633 CAATTTGATGCAAACGTTCAAAGTTATAAGTCTGAGTGGTACCATCAAGGGATTTTTCAA 478692 Query 114453 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 114512 ||| | || || | || || || |||| ||||| |||| || || |||| Sbjct 478693 TGAAAG-CT--GGCAATGCAATGGAGGCCAAGTTACAAACAGCAACTTCTTCTGGGTCAG 478749 Query 114513 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 114572 ||| || | ||| || |||||| || ||| ||| || | ||||||||||| || | Sbjct 478750 AGTATTCGACAATCTCACAACACAAGTTAGAAGACTTGATCATACCCAAGTTCTTCTGGT 478809 Query 114573 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 114632 | | ||| |||||| |||||||||||||||||| |||| || || ||||| || |||| Sbjct 478810 TAGTCTTCTCGTTACAGGCATCCTTGTAAAGCATGAATGGAGTACCAGTCTCAGTCTGGG 478869 Query 114633 ACTTGAGAATAGCCTTCCA-GACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCC 114691 | || || || | ||| || | | | || | ||||| | | || || || Sbjct 478870 CATCAAGGATTGCATACCACAACTTTTGAGCCTTG-ACAGTCTTTCTACCACGACCTTCT 478928 Query 114692 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACC--CACGGCCTCTGAGAGCCCTG 114749 | ||| ||||| || || || | || || ||||| || | || | || |||| Sbjct 478929 TTCTCATACTTCTCATAAAGAGCCTTGAATTCATCACCATAACAG--TCAGCAAGACCTG 478986 Query 114750 GTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGA 114809 |||| | || ||| |||| | || ||||| |||| |||||||| | |||||| | Sbjct 478987 GTGCTTCATTTGGAGAGAACAAAGTCCATTCACCATTAGATTCAACACGTTCCATGAACA 479046 Query 114810 GGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGA-CAGCGAGCTTCTTCATCCCCCTGA 114868 || |||||||| | |||| ||| | ||| ||| | || | ||||| | || ||| Sbjct 479047 AATCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTGATC-TCTTCTTTACCGTGA 479105 Query 114869 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 114928 || | | || | || || | |||||| |||||||| ||||||| || | || Sbjct 479106 TTCTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCA 479165 Query 114929 ATTG-ACCCCTTACGACG--ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACG 114985 | || ||| | | |||| | |||| || || | || ||| ||||| || Sbjct 479166 AATGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACA 479225 Query 114986 CGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTAT 115043 |||| ||||||||| | ||| | ||| || || || || || || ||| || Sbjct 479226 CGAACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAGCCT--G 479283 Query 115044 TGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGC 115103 | ||||| || | ||||||||| | ||| ||||| || || ||| ||||| || | Sbjct 479284 TAGCTCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTCTTGGAGATCAAGGCAC 479343 Query 115104 ACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGC 115163 | | | | | | | ||||| || ||||| || || | | | || | |||||| | Sbjct 479344 ATTGTTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTCATAGCCACAAGGAAAC 479403 Query 115164 AGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGA 115223 | ||||| ||||| ||| |||||||||||||| | ||||| | |||||| ||| Sbjct 479404 AAGAGGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGA 479463 Query 115224 A 115224 | Sbjct 479464 A 479464 >seq5 Length=1593029 Score = 107 bits (118), Expect = 2e-18 Identities = 140/193 (73%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 160682 ATTGTTTTGCCAGTAGGTGTCTACGGTCGCGTGGCACCAAGATCTGGTCTCGCTGTGAAG 160741 |||||| ||||||||| ||| ||||| || || ||| | || ||| | || |||||| Sbjct 980234 ATTGTT---CCAGTAGGTACCTATGGTCGTGTTGCTCCACGTTCCGGTTTGGCCGTGAAG 980290 Query 160742 AGTGGTATCCAAGTTGGTGCGGGTGTTGTGGATCCAGACTACACAGGTGAAGTCAAAGTC 160801 |||||| | ||||| ||||| || ||| ||||||||| ||||||||| || || Sbjct 980291 CACGGTATCTCAACAGGTGCCGGTGTCGTTGATGCAGACTACAGAGGTGAAGTGAAGGTT 980350 Query 160802 GTTCTCTTCAATCACGGGCACACAGATTTCCAAATCAAAAGGGGGGATCGCATCGCGCAA 160861 ||||||||||| ||| | ||| || ||| |||| | ||| || | ||||| || Sbjct 980351 GTTCTCTTCAACCACAGTGACAAGGACTTCTCAATCGCTAAGGGTGACAGAATCGCTCAG 980410 Query 160862 CTCATCTTAGAGA 160874 ||| | || |||| Sbjct 980411 CTCGTTTTGGAGA 980423 Score = 98.7 bits (108), Expect = 1e-15 Identities = 168/241 (70%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| | ||| || |||||| | || | ||||| ||||| || || Sbjct 293550 GGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAAGTCAAACC 293609 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||| | ||| | |||||||||||||||||| | ||| ||||| ||||||||||| Sbjct 293610 TGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACCAGAGAAGAAGAT 293669 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAA 126224 || || ||| || || |||| || | |||| | || || || ||| | | ||| Sbjct 293670 ACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAG-GCTTCTTCATCGGCAA 293728 Query 126225 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 126284 ||| ||| ||||| | ||||| |||| ||||| || | |||| || || | || Sbjct 293729 TCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTCAATGGCATTAA 293788 Query 126285 A 126285 | Sbjct 293789 A 293789 Score = 89.7 bits (98), Expect = 6e-13 Identities = 252/384 (66%), Gaps = 6/384 (2%) Strand=Plus/Plus Query 172621 ACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCG 172680 |||||| || || ||||||||| ||||| ||| ||||| | ||| | || ||||| | Sbjct 650373 ACCCTTGATATGGGAACCATCGGTATCCTGATCTGTCATGAGCATGATACGGCCATATCT 650432 Query 172681 --AAG-CTCGGAAACATCTTGATACTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAG 172737 ||| || || | || | | || ||| ||||| | ||| | ||||| ||| | Sbjct 650433 CAAAGACTTGGTGTCCTCGTACTTCTTCTTG---TGTTGCAAACCAATGATCTGCTTCAA 650489 Query 172738 ATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAAGCATCGCGGACATTTTTACA 172797 |||||| ||| || | || ||| | ||||| || | ||||| Sbjct 650490 GGCATTGATCTCCGCATTATTGGAGATTTGGGTATGAGAAGCCTCTCTAACATTCAATGG 650549 Query 172798 CTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAAC 172857 || ||||| | ||||| ||| |||| || | || || || | ||||| ||||| Sbjct 650550 TTTACCACGCAACGGGAAACAACCATAGTAGTCTCTTCCGACAACTGCTAGACCTGCAAC 650609 Query 172858 TGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGC 172917 || | | | |||||||||||||| |||| ||| | ||||| || | || | Sbjct 650610 GGCCAATGCCAAGGCGGAATCACCCTCTGTCAAGATCAAAGTACATTTATAACCTTCTTT 650669 Query 172918 CGTCCCCGCCTTGTTCGCATCGTCCAACTTGGGAATACCAGTAATTTTGGACTTGCGGGC 172977 || || ||| |||| ||||| | | ||| || | || ||| ||||||| | || Sbjct 650670 AGTACCTGCCATGTTGGCATCATGAAGCTTTGGCAAGTTGGTGATTCTGGACTTTCTGGA 650729 Query 172978 ACCATCTGTCTTCTTGAGTTCCTT 173001 ||||||||||||||||||| |||| Sbjct 650730 ACCATCTGTCTTCTTGAGTGCCTT 650753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353510396960