Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq6 141 9e-29 >seq6 Length=1133955 Score = 141 bits (156), Expect = 9e-29 Identities = 833/1318 (63%), Gaps = 26/1318 (2%) Strand=Plus/Minus Query 93905 TGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGG 93964 |||||||||| || ||||| ||||||||||| || |||||||| || | | | | Sbjct 479442 TGTTCAACGCTGGTACCCCACACCCACAGATGTCCTCTTGTTTCCTTGTGGCTATGAGAG 479383 Query 93965 CCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACG 94024 || |||||| || || | || | | || | ||||| ||||| || || Sbjct 479382 AAGATTCCATCGAGGGTATCTATGAGACTTTGAAACAATGTGCCTTGATCTCCAAGACCG 479323 Query 94025 CGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTA 94084 | || || ||||| | |||| |||| | || | || || ||||| |||| Sbjct 479322 CTGGTGGTATCGGTTTACACATCCATAACGTTAGAGCTACAGGCTCTTACATTGCTGGTA 479263 Query 94085 CCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCT 94144 | || || || || ||||| | | || ||| | || ||||| |||||| | || || | Sbjct 479262 CTAACGGTACTTCTAACGGTTTGATTCCAATGGTTCGTGTCTTTAACAACACTGCTCGTT 479203 Query 94145 ACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGC 94204 |||| ||||| |||||| | ||| ||| | || || | ||| | || || |||| Sbjct 479202 ACGTCGACCAAGGTGGTAACAAGAGACCTGGTGCATTTGCCCTTTATTTGGAACCATGGC 479143 Query 94205 ACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGG 94264 |||| || | | |||||||||| | ||||||| ||||| || || | || | Sbjct 479142 ACGCAGATATCTTTGATTTCATCGACATTAGAAAGAATCACGGTAAAGAAGAGATCAGAG 479083 Query 94265 CCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAA 94324 | | || | ||| || | ||| | || || | || ||| |||| || || | Sbjct 479082 CTCGTGATTTGTTCCCAGCATTGTGGATCCCTGATTTGTTCATGGAACGTGTTGAATCTA 479023 Query 94325 ACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGAT 94384 | | |||| | | || | ||| |||||| || || || | ||| || ||| | Sbjct 479022 ATGGTGAATGGACTTTGTTCTCTCCAAATGAAGCACCAGGTCTTGCTGACTGTTATGG-T 478964 Query 94385 CGCGTTTTGAAGACT-TGTATGCTCGTTACGA-ATCGCAGGGCAAGGCCAGGAAGGTTAT 94442 | || ||| || | |||| || || | | ||| | || || ||| | | Sbjct 478963 GATGAATTCAAGGCTCTTTATGAGAAGTATGAGAAAGAAGGTCGTGG-TAGAAAGACTGT 478905 Query 94443 GGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTA 94502 | ||| ||| ||||| || ||| | || | ||| ||||| ||||| || | Sbjct 478904 CAAGGCTCAAAAGTTGTGGTATGCAATCCTTGATGCCCAGACTGAGACTGGTACTCCATT 478845 Query 94503 CATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCA 94561 ||| | | |||||| |||| |||| ||| | |||||| || || | || |||||| Sbjct 478844 CATGCTTTACAAGGATGCCTGT-AACGAGAAGACTAACCAGAAGAACTTGGGTATGATCA 478786 Query 94562 AGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGT 94621 || || || |||| ||||||||||| || || || || || ||||||| | Sbjct 478785 AGTCTTCTAACTTGTGTTGTGAGATTGTCGAATACTCTGACCCAGAAGAAGTTGCTGTTT 478726 Query 94622 GTAACCTGGGCTCCATCAACCTGTCCACTTTC-GTGCGAGATGCCTACACGTCTACTGCT 94680 ||||| ||| |||||| || | ||||| || | || ||| | | ||| || Sbjct 478725 GTAACTTGGCCTCCATTGCATTGCCAGCTTTCATTGAAAAATCCCTTGATG-GTACCACT 478667 Query 94681 TCG--TTCGATCTGGAGGAGCTTG--TGAACTTCGCGGGAAGGATGGTC---TTGAACCT 94733 | || | || | ||| | || || | |||| | ||| |||| | Sbjct 478666 CAGACTTATAACTTTGAACGTTTGCATCAAATT---GCCAAGG-TTGTCACAAAGAACTT 478611 Query 94734 GAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAA 94793 |||||| | || ||| |||| |||||| ||||| || || ||||| || ||| Sbjct 478610 GAACAGAATCATTGACCGTAACTACTACCCAGTCCCAGAAGCTAGAAACTCCAATATGAG 478551 Query 94794 GCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCT 94853 | | || || | | |||| || || ||||| || || || | |||| ||||| | Sbjct 478550 AAACAGACCAATTGCCCTCGGTGTTCAAGGTTTAGCTGATGCCTTTATGATTTTGCGTTT 478491 Query 94854 GCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTA 94913 ||| | || |||| | || || ||||| | | || ||||| | ||||||| | Sbjct 478490 GCCATTTGAATCTGAAAAGGCTAAGGAATTGAACATTCAGATCTTCGAGACCATTTATCA 478431 Query 94914 CGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCGTT 94973 || || || | || | | | |||| || || || ||| ||||||| || Sbjct 478430 CGCTGCTTTGGAGTCCTCTCTTGAGCTCGCCAAGTC---CGAAGGTCCATACGAATCATT 478374 Query 94974 CCGCGGATCGCC--CTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCC 95031 || || || || ||| | |||| ||||||| ||||| ||||| ||||| Sbjct 478373 CCAAGGTTCCCCAGCTTCTA--AGGGTCAGCTTCAGTTTGACCTTTGGGGAAGAAAGCCT 478316 Query 95032 TCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAAC 95091 || | | ||| || ||||| |||| |||||| || |||| ||||| ||| |||| Sbjct 478315 TCCGATTTGTGGGATTGGGATACTCTTAAGGCTGATATTGTCAAGTACGGTTTGAGAAAC 478256 Query 95092 GCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAG 95151 | ||||||| || || ||||| || ||||| || | || ||| | || ||||||| Sbjct 478255 TCTTTGCTTGTTGCTCCAATGCCAACTGCCTCGACTTCTCAAATCTTGGGTTACAACGAA 478196 Query 95152 TCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCC 95209 | |||||||| | ||| || ||| | ||| | || || || || || ||||||| Sbjct 478195 TGTTTCGAACCATACACTTCTAACATTTACTCTCGTCGTGTCCTTGCTGGTGAATTCC 478138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723125791520