Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1 105 7e-18 seq7 98.7 1e-15 >seq1 Length=3147266 Score = 105 bits (116), Expect = 7e-18 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | |||||| || || | | |||||||||| ||||||||||||||| Sbjct 843470 CCACCTCTCAATCTCAAAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAG 843411 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || || || || ||||||| | |||| || | ||| ||||| || || Sbjct 843410 AGGGTTCTACCATCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGG 843351 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| || | || | |||| ||| || | || |||| ||||| | Sbjct 843350 ATACCCTCCTTGTC-CTGGATCTTAGACTTAACGTTG-TCAATAGTATCGGAGGACTCAA 843293 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | || |||||||||| || || || ||||| ||||| Sbjct 843292 CCTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 843244 Score = 105 bits (116), Expect = 7e-18 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || || | | |||||||| ||||||||||||||| | Sbjct 843698 CCACCTCTCAATCTCAACACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAC 843639 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||||| || || ||||| | | |||| || | ||| ||||| || || Sbjct 843638 AAGGTTCTACCATCCTCAAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGGA 843579 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| | || | |||| ||| || | ||||| | || || | Sbjct 843578 ATACCTTCCTTGTC-TTGAATCTTAGACTTAACGTTG-TCAATAGTGTCAGAGGATTCAA 843521 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | || |||||||||| || || ||||| |||||||| Sbjct 843520 CCTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 843472 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | |||||| || || | | |||||||| || |||||||||||| Sbjct 843242 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 843183 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || | || | || ||||| || ||||||| |||| || | ||| ||||| || || Sbjct 843182 AGGGTTCTGCCA-TCTTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGG 843124 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || ||||| ||| | || | || | ||| || | |||||||| ||||| Sbjct 843123 GATACCCTCCTTGTC-CTGAATCTTGGACTTGACGTTG-TCAATGGTGTCGGAAGACTCA 843066 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | || ||||| |||| || || || ||||| ||||| Sbjct 843065 ACCTCAAGTGTAATAGTCTTACCGGTCAAGGTCTTCACGAAAATTTGCAT 843016 >seq7 Length=431226 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | | || || || | | | |||||||| |||||||||||||| Sbjct 275144 CCACCTCTCAATCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 275085 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||||| || || ||||||| | |||| || | ||| ||||| || || Sbjct 275084 AGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGG 275025 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| ||| || || | |||| || | ||||||| ||||| || Sbjct 275024 ATACCTTCTTTGTCCTGGATCTTGGACTTGACATTG-TCAATAGTGTCGGAAGACTCAAC 274966 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || ||||| || || || || ||||| |||||||| Sbjct 274965 CTCCAAAGTGATGGTCTTACCCGTGAGGGTCTTAACAAAGATCTGCAT 274918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262325560640