Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq6 183 4e-41
seq5 120 4e-22
>seq6
Length=1133955
Score = 183 bits (202), Expect = 4e-41
Identities = 680/1052 (65%), Gaps = 39/1052 (4%)
Strand=Plus/Plus
Query 116161 GCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCA 116220
|| |||||||| || ||||| || || || |||| | |||| |||| || || |||
Sbjct 478425 GCAGCGTGATAAATGGTCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGATTCA 478484
Query 116221 AACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGG 116280
|| | | ||| | | ||||| |||| || | |||||| ||||||||| |||||||
Sbjct 478485 AATGGCAAACGCAAAATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTGGT 478544
Query 116281 CGATGTCTCATATTAGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGATAAC 116339
| | ||||||||| || |||| ||| ||| || || || | || | || || |
Sbjct 478545 CTGTTTCTCATATTGGAGTTTCTAGCT-TCTGGGACTGGGTAGTAGTTACGGTCAATGAT 478603
Query 116340 CCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACT 116399
|| || | || || ||||||||||| | |||| ||| | ||| | | | || |
Sbjct 478604 TCTGTTCAAGTTCTTTGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAGT 478663
Query 116400 GCGAGTC---------------TCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAG 116444
|||| | |||| ||| | || || | || || || ||||
Sbjct 478664 CTGAGTGGTACCATCAAGGGATTTTTCAATGAAAG-CT--GGCAATGCAATGGAGGCCAA 478720
Query 116445 ATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGA 116504
||||| |||| || || |||| ||| || | ||| || |||||| || ||
Sbjct 478721 GTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAGA 478780
Query 116505 ACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAG 116564
| ||| || | ||||||||||| || || | ||| |||||| ||||||||||| ||
Sbjct 478781 AGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAAG 478840
Query 116565 CATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA-TACATCGGCGG 116623
||| |||| || || ||||| || |||| | || || || | ||| || | | |
Sbjct 478841 CATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATACCACAACTTTTGAGC 478900
Query 116624 CTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACT 116683
|| | ||||| | | || || || | ||| ||||| || || |||| || |
Sbjct 478901 CTTG-ACAGTCTTTCTACCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTTGAATT 478959
Query 116684 CTTCACC--CACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTG 116741
| ||||| |||| || | || |||||||| | || |||| |||| | || |||||
Sbjct 478960 CATCACCATAACAG--TCAGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCATTC 479017
Query 116742 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATC 116801
|||| ||||| || | |||||| | || |||||||| | || | ||| | |||
Sbjct 479018 ACCATTAGATTCAACACGTTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATC 479077
Query 116802 CCGA-CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATAT 116860
||| | || | ||||| | || ||||| | | || | || || | |||||
Sbjct 479078 ACGAGCTCTGATC-TCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATAT 479136
Query 116861 CCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTGCGACGACCAGCCT 116914
| |||||||| ||||||| || | || | || || | |||| |||| | |
Sbjct 479137 CTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTG---TTACCACCTT 479193
Query 116915 GGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATT 116974
||| || || | || || |||||| || |||| ||||||||| | ||| | |||
Sbjct 479194 GGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAG 479253
Query 116975 GGCCATTTGTCCCCCGAATACGAGA-CTTGTTGGCTCTGACATCGTGGATGTGCATACCA 117033
|| || || || ||| ||| | || | ||||| || | |||||||| | |||
Sbjct 479254 TACCGTTAGTACCAGCAATGTAAGAGCCTG-TAGCTCTAACGTTATGGATGTGTAAACCG 479312
Query 117034 ATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCG 117093
||||| || || ||| ||||| || || | | | | | | ||||| || |||
Sbjct 479313 ATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCG 479372
Query 117094 ATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCA 117153
|| || || | | | || | ||||| || ||||| ||||| ||| ||||||
Sbjct 479373 ATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCA 479432
Query 117154 GCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185
|||||||| | ||||| | |||||| ||||
Sbjct 479433 GCGTTGAACAAAGTTGGAGAAGCGTGGGTGAA 479464
>seq5
Length=1593029
Score = 120 bits (132), Expect = 4e-22
Identities = 194/279 (70%), Gaps = 9/279 (3%)
Strand=Plus/Plus
Query 163344 ATTGTTTTGCCAGTAGGTGTGTACGGTCGCGTGGCACCAAGATCTGGTCTCGCTGTGAAG 163403
|||||| ||||||||| || ||||| || || ||| | || ||| | || ||||||
Sbjct 980234 ATTGTT---CCAGTAGGTACCTATGGTCGTGTTGCTCCACGTTCCGGTTTGGCCGTGAAG 980290
Query 163404 AGCGGTATCCAAGTTGGTGCGGGTGTTGTGGATCCAGACTACACAGGTGAAGTCAAAGTC 163463
||||||| | ||||| ||||| || ||| ||||||||| ||||||||| || ||
Sbjct 980291 CACGGTATCTCAACAGGTGCCGGTGTCGTTGATGCAGACTACAGAGGTGAAGTGAAGGTT 980350
Query 163464 GTTCTCTTCAATCACGGACACATGGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAA 163523
||||||||||| ||| | ||| ||| ||| |||| ||||| || | ||||| ||
Sbjct 980351 GTTCTCTTCAACCACAGTGACAAGGACTTCTCAATCGCTAAGGGTGACAGAATCGCTCAG 980410
Query 163524 CTCATCTTAGAGAGGTGTGAGACACCCCAAGTTGAAGAAATTGGTGCGG------TTGAG 163577
||| | || |||| | || | | | || | || || |||| | ||
Sbjct 980411 CTCGTTTTGGAGAAGATTGTCAATGCTGAGATTCAGGAGATCACAGCGGAGGAGCTCGAT 980470
Query 163578 GAGACCGAGAGAGGTTCGGGTGGATTCGGTTCTACAGGT 163616
| || ||||||||| | ||||| ||||||||||| |||
Sbjct 980471 AACACTGAGAGAGGTGCAGGTGGTTTCGGTTCTACTGGT 980509
Score = 93.3 bits (102), Expect = 5e-14
Identities = 166/240 (69%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || ||| | ||| || |||||| | || | ||||| ||||| || ||||
Sbjct 293551 GCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAAGTCAAACCT 293610
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
||||| | ||| | |||||||||||||||||| | ||| || ||||||||||||||
Sbjct 293611 GGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACCAGAGAAGAAGATA 293670
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAA 127698
|| || ||| || || |||| || | ||| | || || | ||| | |||
Sbjct 293671 CCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAG-GCTTCTTCATCGGCAAT 293729
Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAA 127758
||| ||| ||||| | ||||| |||| |||||||| | |||| || || | |||
Sbjct 293730 CCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTCAATGGCATTAAA 293789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507107973920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |