Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq7 123 6e-23
seq1 123 6e-23
seq4 105 2e-17
>seq7
Length=431226
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||| || || | ||| || || |||||||| || | ||||||||||| | || || ||
Sbjct 275133 TCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCTACC 275074
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||| || |||||||| ||||| ||||| || | ||||||||| || || ||||||
Sbjct 275073 ATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCTTCTTT 275014
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| || || | ||||| | | || || ||||| |||||
Sbjct 275013 GTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCCAAAGTGAT 274954
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||||||||| || || ||||| || ||
Sbjct 274953 GGTCTTACCCGTGAGGGTCTTAACAAAGATCTG 274921
>seq1
Length=3147266
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | ||| ||||| |||||||| |||| ||||||||| | | || || ||
Sbjct 843231 TCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCTGCC 843172
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| |||||||| ||||||||||| || | ||||||||| || || || ||
Sbjct 843171 ATCTTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTT 843112
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||||||||| ||| ||| || | |||||| | | || || || | || ||
Sbjct 843111 GTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCAACCTCAAGTGTAAT 843052
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || | || ||||| ||||||||
Sbjct 843051 AGTCTTACCGGTCAAGGTCTTCACGAAAATTTG 843019
Score = 96.9 bits (106), Expect = 8e-15
Identities = 76/91 (84%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 200934 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 200993
||||||||||||||| |||||| | |||||||| || || | |||| |||||| ||||
Sbjct 843141 ACTTATCTTCGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAACATCCA 843200
Query 200994 GAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024
||| ||||| ||||||||| | |||||||||
Sbjct 843201 GAAGGAGTCCACTCTTCACTTGGTTTTGAGA 843231
Score = 86.0 bits (94), Expect = 1e-11
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| ||||| |||||||| || | ||||||||| | | || || ||
Sbjct 843003 TCTCAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTTCTACC 842944
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||| || |||||||| ||||| ||||| || | |||||| || || || || ||
Sbjct 842943 ATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCAGGCGGGATACCCTCCTT 842884
Query 199534 CTCCTGAATCTT 199545
|||||||||||
Sbjct 842883 GTCCTGAATCTT 842872
>seq4
Length=1873953
Score = 105 bits (116), Expect = 2e-17
Identities = 148/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||| ||||| | || | ||| |||||||| |||| ||||||||||| | || || ||
Sbjct 1428429 TCTGAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACC 1428370
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|| || |||||||| ||||||||||| || | ||||||||| || || || ||
Sbjct 1428369 GTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTT 1428310
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| ||| || | |||||| | | || || ||||| || ||
Sbjct 1428309 GTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 1428250
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621
|||||||| || | || || || |||
Sbjct 1428249 GGTCTTACCGGTCAAGGTCTTAACGAAA 1428222
Score = 86.0 bits (94), Expect = 1e-11
Identities = 110/149 (74%), Gaps = 2/149 (1%)
Strand=Plus/Minus
Query 98365 CGGCAGCTTCCGCCACCTTCCGGAGGTAATTGTGCCTCTTCTCCTTTCTTAATCTCTCGA 98424
||||| |||| || ||||| || | || || || |||||||| | ||| ||||| |||
Sbjct 475180 CGGCAACTTCGGCGACCTTACGAATATAGTTATGTCTCTTCTCTTCTCTCAATCTGGCGA 475121
Query 98425 AACGAAGGGCAGATTGTCCTCCCCTCCCGTGTTTCTTTGGCAAAGAGAC-GTCAAAATTA 98483
|||| | || || || || || || ||||| ||||||||||| ||| || || ||
Sbjct 475120 AACGGACAGCGGACTGACCACCTCTTCCGTGCTTCTTTGGCAAGTCGACGGTGAACTTTG 475061
Query 98484 TGAAGAATTTTCTTGGTGTTCCCAGAGAG 98512
||| || ||| ||||||| ||||||||
Sbjct 475060 TGATGACGGTTC-TGGTGTTACCAGAGAG 475033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921418740804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |