Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq7 123 6e-23 seq1 123 6e-23 seq4 105 2e-17 >seq7 Length=431226 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | ||| || || |||||||| || | ||||||||||| | || || || Sbjct 275133 TCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCTACC 275074 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| || |||||||| ||||| ||||| || | ||||||||| || || |||||| Sbjct 275073 ATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCTTCTTT 275014 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||| ||||| ||| || || | ||||| | | || || ||||| ||||| Sbjct 275013 GTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCCAAAGTGAT 274954 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||||||||| || || ||||| || || Sbjct 274953 GGTCTTACCCGTGAGGGTCTTAACAAAGATCTG 274921 >seq1 Length=3147266 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | ||| ||||| |||||||| |||| ||||||||| | | || || || Sbjct 843231 TCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCTGCC 843172 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| |||||||| ||||||||||| || | ||||||||| || || || || Sbjct 843171 ATCTTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTT 843112 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||||||||| ||| ||| || | |||||| | | || || || | || || Sbjct 843111 GTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCAACCTCAAGTGTAAT 843052 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | || ||||| |||||||| Sbjct 843051 AGTCTTACCGGTCAAGGTCTTCACGAAAATTTG 843019 Score = 96.9 bits (106), Expect = 8e-15 Identities = 76/91 (84%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 200934 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 200993 ||||||||||||||| |||||| | |||||||| || || | |||| |||||| |||| Sbjct 843141 ACTTATCTTCGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAACATCCA 843200 Query 200994 GAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024 ||| ||||| ||||||||| | ||||||||| Sbjct 843201 GAAGGAGTCCACTCTTCACTTGGTTTTGAGA 843231 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| ||||| |||||||| || | ||||||||| | | || || || Sbjct 843003 TCTCAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTTCTACC 842944 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| || |||||||| ||||| ||||| || | |||||| || || || || || Sbjct 842943 ATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCAGGCGGGATACCCTCCTT 842884 Query 199534 CTCCTGAATCTT 199545 ||||||||||| Sbjct 842883 GTCCTGAATCTT 842872 >seq4 Length=1873953 Score = 105 bits (116), Expect = 2e-17 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| ||||| | || | ||| |||||||| |||| ||||||||||| | || || || Sbjct 1428429 TCTGAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACC 1428370 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 || || |||||||| ||||||||||| || | ||||||||| || || || || Sbjct 1428369 GTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTT 1428310 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||| ||||| ||| ||| || | |||||| | | || || ||||| || || Sbjct 1428309 GTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 1428250 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621 |||||||| || | || || || ||| Sbjct 1428249 GGTCTTACCGGTCAAGGTCTTAACGAAA 1428222 Score = 86.0 bits (94), Expect = 1e-11 Identities = 110/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 98365 CGGCAGCTTCCGCCACCTTCCGGAGGTAATTGTGCCTCTTCTCCTTTCTTAATCTCTCGA 98424 ||||| |||| || ||||| || | || || || |||||||| | ||| ||||| ||| Sbjct 475180 CGGCAACTTCGGCGACCTTACGAATATAGTTATGTCTCTTCTCTTCTCTCAATCTGGCGA 475121 Query 98425 AACGAAGGGCAGATTGTCCTCCCCTCCCGTGTTTCTTTGGCAAAGAGAC-GTCAAAATTA 98483 |||| | || || || || || || ||||| ||||||||||| ||| || || || Sbjct 475120 AACGGACAGCGGACTGACCACCTCTTCCGTGCTTCTTTGGCAAGTCGACGGTGAACTTTG 475061 Query 98484 TGAAGAATTTTCTTGGTGTTCCCAGAGAG 98512 ||| || ||| ||||||| |||||||| Sbjct 475060 TGATGACGGTTC-TGGTGTTACCAGAGAG 475033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921418740804