Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq4 104 3e-17 seq1 98.7 1e-15 seq7 96.9 4e-15 >seq4 Length=1873953 Score = 104 bits (114), Expect = 3e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | | |||| |||||| || |||||| ||||| |||||||| || Sbjct 1428440 CCACCTCTCAATCTGAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1428381 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | |||| ||||||||||| |||||||| || | | ||||||||| | || Sbjct 1428380 AGGGTTCTACCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGG 1428321 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | |||||||||| |||||| ||||| ||| | | | ||||| || || || Sbjct 1428320 ATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTGTCAGAGGACTCAAC 1428262 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAA 46584 |||| || ||||| || || |||| || ||||| || Sbjct 1428261 CTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAA 1428223 >seq1 Length=3147266 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | ||| |||| || | || |||||| ||||| ||||||||||| Sbjct 843242 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 843183 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | || ||||||||||| |||||||| || | | ||||||||| | || Sbjct 843182 AGGGTTCTGCCATCTTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGG 843123 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | |||||||||| ||||| ||||| ||| | | | |||||| || || || Sbjct 843122 ATACCCTCCTTGTCCTGAATCTTGGACTTGA-CGTTGTCAATGGTGTCGGAAGACTCAAC 843064 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || || || || || |||| || || || || |||||||| Sbjct 843063 CTCAAGTGTAATAGTCTTACCGGTCAAGGTCTTCACGAAAATTTGCAT 843016 >seq7 Length=431226 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||| || || || | | || || |||||||| ||||| || Sbjct 275109 CTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAA 275050 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||||||||| | || | | || |||||| |||||| ||||| | Sbjct 275049 GATAAGTCTCTGCTGGTCAGGTGGGATACCTTCTTTGTCCTGGATCTTGGACTTGACATT 274990 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| || || || |||| |||||||| || ||||| || || ||||| Sbjct 274989 GTCAATAGTGTCGGAAGACTCAACCTCCAAAGTGATGGTCTTACCCGTGAGGGTCTTAAC 274930 Query 46582 AAAGATTTGCATTTTG 46597 |||||| ||||| ||| Sbjct 274929 AAAGATCTGCATCTTG 274914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238315214240