Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq4 136 2e-26
seq1 116 1e-20
>seq4
Length=1873953
Score = 136 bits (150), Expect = 2e-26
Identities = 264/386 (68%), Gaps = 3/386 (1%)
Strand=Plus/Minus
Query 451220 AAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATG 451279
|| ||||| || || ||||| | || ||||| || || || ||||| || || |||
Sbjct 1420476 AAGGGTGAGACAAAGACTTTCACACCGGAAGAGATCTCTTCAATGGTGCTCGTCAAGATG 1420417
Query 451280 AAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCC 451339
|| || || || || ||| | ||||| | || | ||||| || || ||||||||
Sbjct 1420416 AAGGAGACCGCCGAGTCATACCTCGGTTCCGCTGTCAAGGATGCTGTCATCACTGTTCCA 1420357
Query 451340 GCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTA 451399
||||| ||||| || |||| | ||||||||||| ||||| || | |||||||||||
Sbjct 1420356 GCTTACTTCAACGACTCACAGAGACAAGCAACTAAGGATGCCGGTCTCATTGCTGGTTTG 1420297
Query 451400 AATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAA 451459
|| |||||||| || || || || || || || |||||| | || || || | ||| ||
Sbjct 1420296 AACGTTCTTCGTATCATCAACGAGCCAACTGCCGCTGCTATTGCCTACGG-TTTGGACAA 1420238
Query 451460 TCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGAT 451519
|| | | || ||| | || |||| | || || || ||||| || ||| |||
Sbjct 1420237 -GAAGGGCGAGAG-TGAACACAACGTTTTGATTTTCGACTTGGGTGGTGGTACTTTCGAT 1420180
Query 451520 ACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACT 451579
|| | | || || || ||||| || || || || ||||| || ||||| ||
Sbjct 1420179 GTCTCCCTTTTGTCCATCGATGATGGTGTCTTCGAGGTCAAGGCTACTGCAGGTGACACA 1420120
Query 451580 CATCTAGGAGGTGAAGATATTGATAA 451605
|| | || ||||| || |||||||
Sbjct 1420119 CACTTGGGTGGTGAGGACTTTGATAA 1420094
>seq1
Length=3147266
Score = 116 bits (128), Expect = 1e-20
Identities = 160/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || |||||||||| |||||||| || || ||||| || ||
Sbjct 843244 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAGTCCTCC 843303
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||||| |||| || || || || ||||| || || || ||||| ||
Sbjct 843304 GATACTATTGACAACGTTAAGTCTAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 843363
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| | | || || | || || || ||||||||||| ||||| | | || || ||
Sbjct 843364 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGATGGTAGAACCCTCTCCGACTACAAC 843423
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
||| | ||||| |||| |||||||| || || ||| |||||||
Sbjct 843424 ATTCAGAAGGAGTCAACCCTTCACTTGGTTTTGAGATTGAGAGG 843467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975718096233296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |