Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq4 136 2e-26 seq1 116 1e-20 >seq4 Length=1873953 Score = 136 bits (150), Expect = 2e-26 Identities = 264/386 (68%), Gaps = 3/386 (1%) Strand=Plus/Minus Query 451220 AAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATG 451279 || ||||| || || ||||| | || ||||| || || || ||||| || || ||| Sbjct 1420476 AAGGGTGAGACAAAGACTTTCACACCGGAAGAGATCTCTTCAATGGTGCTCGTCAAGATG 1420417 Query 451280 AAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCC 451339 || || || || || ||| | ||||| | || | ||||| || || |||||||| Sbjct 1420416 AAGGAGACCGCCGAGTCATACCTCGGTTCCGCTGTCAAGGATGCTGTCATCACTGTTCCA 1420357 Query 451340 GCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTA 451399 ||||| ||||| || |||| | ||||||||||| ||||| || | ||||||||||| Sbjct 1420356 GCTTACTTCAACGACTCACAGAGACAAGCAACTAAGGATGCCGGTCTCATTGCTGGTTTG 1420297 Query 451400 AATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAA 451459 || |||||||| || || || || || || || |||||| | || || || | ||| || Sbjct 1420296 AACGTTCTTCGTATCATCAACGAGCCAACTGCCGCTGCTATTGCCTACGG-TTTGGACAA 1420238 Query 451460 TCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGAT 451519 || | | || ||| | || |||| | || || || ||||| || ||| ||| Sbjct 1420237 -GAAGGGCGAGAG-TGAACACAACGTTTTGATTTTCGACTTGGGTGGTGGTACTTTCGAT 1420180 Query 451520 ACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACT 451579 || | | || || || ||||| || || || || ||||| || ||||| || Sbjct 1420179 GTCTCCCTTTTGTCCATCGATGATGGTGTCTTCGAGGTCAAGGCTACTGCAGGTGACACA 1420120 Query 451580 CATCTAGGAGGTGAAGATATTGATAA 451605 || | || ||||| || ||||||| Sbjct 1420119 CACTTGGGTGGTGAGGACTTTGATAA 1420094 >seq1 Length=3147266 Score = 116 bits (128), Expect = 1e-20 Identities = 160/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || |||||||||| |||||||| || || ||||| || || Sbjct 843244 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAGTCCTCC 843303 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| |||| || || || || ||||| || || || ||||| || Sbjct 843304 GATACTATTGACAACGTTAAGTCTAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 843363 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || || || ||||||||||| ||||| | | || || || Sbjct 843364 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGATGGTAGAACCCTCTCCGACTACAAC 843423 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| |||| |||||||| || || ||| ||||||| Sbjct 843424 ATTCAGAAGGAGTCAACCCTTCACTTGGTTTTGAGATTGAGAGG 843467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975718096233296