Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq1 114 1e-19
seq5 111 1e-18
seq4 95.1 9e-14
>seq1
Length=3147266
Score = 114 bits (126), Expect = 1e-19
Identities = 240/357 (67%), Gaps = 3/357 (1%)
Strand=Plus/Plus
Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085
||| || || ||||| ||||| | ||||| || || || || || | ||| | ||
Sbjct 2756301 ATCGAAGTCCTCACCACCCAAGTGAGTATCACCGGAAGTGGCCAAAACCTCGAAGACACC 2756360
Query 518086 ATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145
| ||||| |||||| || | ||||| ||| |||||||||| || | | || |
Sbjct 2756361 AGATTCAATAGACAAGAGGGAAACATCGAAGGTACCACCACCCAAGTCGTAGACAATGA- 2756419
Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205
|| | || ||| || || | ||| || || | ||||||||||||||||||
Sbjct 2756420 --TCTGGTGTTCACCTTCACCCTTGTCCATACCGTAGGCGATAGCAGCAGCAGTTGGTTC 2756477
Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265
|| | ||||| | ||| || | ||||||||| | || ||||| ||||| || ||| |
Sbjct 2756478 GTTGACGATTCTGAGAACGTTCAAACCAGCAATGGTACCGGCATCCTTAGTAGCCTGTTT 2756537
Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAAT 518325
|| | |||||| || || || |||||||| | |||||| | ||| || | |||| |
Sbjct 2756538 CTGAGCATCGTTGAAGTAAGCTGGAACAGTGACAACGGCGTGAGTAACCTTGGTACCCAA 2756597
Query 518326 ATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382
||| | ||| | ||||| |||| |||||||| | || || | |||||
Sbjct 2756598 GTAATCCTCTGCAATGCTCTTCATCTTACCCAAAATCATAGCGGAGATCTCCTCTGG 2756654
>seq5
Length=1593029
Score = 111 bits (122), Expect = 1e-18
Identities = 228/337 (68%), Gaps = 4/337 (1%)
Strand=Plus/Minus
Query 635403 ATAATGCTCACAAGGCAGGAACCAAAGAAGGATATAAATGTACCCTAATTTTGACAGAGG 635462
|| |||| ||| |||||| || |||||||| ||||||||||| | || ||||||||||
Sbjct 650692 ATGATGCCAACATGGCAGGTACTAAAGAAGGTTATAAATGTACTTTGATCTTGACAGAGG 650633
Query 635463 GAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAATGTTATTGGAAGAGATTATTATG 635522
| ||||| || |||| || | | ||||| ||| | |||||||| || ||||
Sbjct 650632 GTGATTCCGCCTTGGCATTGGCCGTTGCAGGTCTAGCAGTTGTCGGAAGAGACTACTATG 650573
Query 635523 GAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCTAGTCCTaaaaaaaTTG 635582
| |||||| | | || |||| ||||||||||| || ||| || || ||||
Sbjct 650572 GTTGTTTCCCGTTGCGTGGTAAACCATTGAATGTTAGAGAGGCTTCTCATACCCAAATCT 650513
Query 635583 CTGATAATGAGGAAATTACAGCAATCaaaaaaaTTGTTGGACTTGA--ACAAGGAAAAGT 635640
| |||||| ||| || | || | || | || |||| | | ||||| | |||
Sbjct 650512 CCAATAATGCGGAGATCAATGCCTTGAAGCAGATCATTGGTTTGCAACACAAGAAGAAG- 650454
Query 635641 TTATGATGATCTCAAAGGTTTACGATATGGTAGTATTATGATTCTTGCTGATCAAGATGT 635700
|| || || ||| ||| ||||||| |||| ||| | | | ||||| |||
Sbjct 650453 -TACGAGGACACCAAGTCTTTGAGATATGGCCGTATCATGCTCATGACAGATCAGGATAC 650395
Query 635701 TGATGGGTACCATATCAAAGGATTAATCATGAATTTT 635737
||||| | ||||||||| || ||| | || || |||
Sbjct 650394 CGATGGTTCCCATATCAAGGGTTTATTGATCAACTTT 650358
>seq4
Length=1873953
Score = 95.1 bits (104), Expect = 9e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227
|| || | |||||| || ||||| ||||||||||| || |||| | | |||||| ||
Sbjct 1629678 TTCTCCAAACCATAAGCCAAAGCGGCAGCAGTTGGCTCGTTAACGACACGCAAAACGTTC 1629619
Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287
| ||| |||| || ||||| ||||| || ||||| || |||||||| || || ||
Sbjct 1629618 AAACCGACAATCTGACCGGCATCCTTAGTAGCCTGTCTCTGAGAATCGTTGAAGTAAGCT 1629559
Query 518288 GGAACAGTAATAACGGC 518304
|| ||||||| ||||||
Sbjct 1629558 GGGACAGTAACAACGGC 1629542
Score = 87.8 bits (96), Expect = 1e-11
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 322241 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 322300
|||||||| |||| ||| || |||||||| || || || || |||||| | |||||
Sbjct 1420244 AAACCGTAGGCAATAGCAGCGGCAGTTGGCTCGTTGATGATACGAAGAACGTTCAAACCA 1420303
Query 322301 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 322360
||||| | | | ||| ||||||||||||||||| ||| || || || ||||| |||
Sbjct 1420304 GCAATGAGACCGGCATCCTTAGTTGCTTGTCTCTGTGAGTCGTTGAAGTAAGCTGGAACA 1420363
Query 322361 GTAATAACTGC 322371
|| || || ||
Sbjct 1420364 GTGATGACAGC 1420374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780821804520472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |