Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1 114 1e-19 seq5 111 1e-18 seq4 95.1 9e-14 >seq1 Length=3147266 Score = 114 bits (126), Expect = 1e-19 Identities = 240/357 (67%), Gaps = 3/357 (1%) Strand=Plus/Plus Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085 ||| || || ||||| ||||| | ||||| || || || || || | ||| | || Sbjct 2756301 ATCGAAGTCCTCACCACCCAAGTGAGTATCACCGGAAGTGGCCAAAACCTCGAAGACACC 2756360 Query 518086 ATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145 | ||||| |||||| || | ||||| ||| |||||||||| || | | || | Sbjct 2756361 AGATTCAATAGACAAGAGGGAAACATCGAAGGTACCACCACCCAAGTCGTAGACAATGA- 2756419 Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205 || | || ||| || || | ||| || || | |||||||||||||||||| Sbjct 2756420 --TCTGGTGTTCACCTTCACCCTTGTCCATACCGTAGGCGATAGCAGCAGCAGTTGGTTC 2756477 Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265 || | ||||| | ||| || | ||||||||| | || ||||| ||||| || ||| | Sbjct 2756478 GTTGACGATTCTGAGAACGTTCAAACCAGCAATGGTACCGGCATCCTTAGTAGCCTGTTT 2756537 Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAAT 518325 || | |||||| || || || |||||||| | |||||| | ||| || | |||| | Sbjct 2756538 CTGAGCATCGTTGAAGTAAGCTGGAACAGTGACAACGGCGTGAGTAACCTTGGTACCCAA 2756597 Query 518326 ATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382 ||| | ||| | ||||| |||| |||||||| | || || | ||||| Sbjct 2756598 GTAATCCTCTGCAATGCTCTTCATCTTACCCAAAATCATAGCGGAGATCTCCTCTGG 2756654 >seq5 Length=1593029 Score = 111 bits (122), Expect = 1e-18 Identities = 228/337 (68%), Gaps = 4/337 (1%) Strand=Plus/Minus Query 635403 ATAATGCTCACAAGGCAGGAACCAAAGAAGGATATAAATGTACCCTAATTTTGACAGAGG 635462 || |||| ||| |||||| || |||||||| ||||||||||| | || |||||||||| Sbjct 650692 ATGATGCCAACATGGCAGGTACTAAAGAAGGTTATAAATGTACTTTGATCTTGACAGAGG 650633 Query 635463 GAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAATGTTATTGGAAGAGATTATTATG 635522 | ||||| || |||| || | | ||||| ||| | |||||||| || |||| Sbjct 650632 GTGATTCCGCCTTGGCATTGGCCGTTGCAGGTCTAGCAGTTGTCGGAAGAGACTACTATG 650573 Query 635523 GAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCTAGTCCTaaaaaaaTTG 635582 | |||||| | | || |||| ||||||||||| || ||| || || |||| Sbjct 650572 GTTGTTTCCCGTTGCGTGGTAAACCATTGAATGTTAGAGAGGCTTCTCATACCCAAATCT 650513 Query 635583 CTGATAATGAGGAAATTACAGCAATCaaaaaaaTTGTTGGACTTGA--ACAAGGAAAAGT 635640 | |||||| ||| || | || | || | || |||| | | ||||| | ||| Sbjct 650512 CCAATAATGCGGAGATCAATGCCTTGAAGCAGATCATTGGTTTGCAACACAAGAAGAAG- 650454 Query 635641 TTATGATGATCTCAAAGGTTTACGATATGGTAGTATTATGATTCTTGCTGATCAAGATGT 635700 || || || ||| ||| ||||||| |||| ||| | | | ||||| ||| Sbjct 650453 -TACGAGGACACCAAGTCTTTGAGATATGGCCGTATCATGCTCATGACAGATCAGGATAC 650395 Query 635701 TGATGGGTACCATATCAAAGGATTAATCATGAATTTT 635737 ||||| | ||||||||| || ||| | || || ||| Sbjct 650394 CGATGGTTCCCATATCAAGGGTTTATTGATCAACTTT 650358 >seq4 Length=1873953 Score = 95.1 bits (104), Expect = 9e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || || | |||||| || ||||| ||||||||||| || |||| | | |||||| || Sbjct 1629678 TTCTCCAAACCATAAGCCAAAGCGGCAGCAGTTGGCTCGTTAACGACACGCAAAACGTTC 1629619 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | ||| |||| || ||||| ||||| || ||||| || |||||||| || || || Sbjct 1629618 AAACCGACAATCTGACCGGCATCCTTAGTAGCCTGTCTCTGAGAATCGTTGAAGTAAGCT 1629559 Query 518288 GGAACAGTAATAACGGC 518304 || ||||||| |||||| Sbjct 1629558 GGGACAGTAACAACGGC 1629542 Score = 87.8 bits (96), Expect = 1e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 322241 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 322300 |||||||| |||| ||| || |||||||| || || || || |||||| | ||||| Sbjct 1420244 AAACCGTAGGCAATAGCAGCGGCAGTTGGCTCGTTGATGATACGAAGAACGTTCAAACCA 1420303 Query 322301 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 322360 ||||| | | | ||| ||||||||||||||||| ||| || || || ||||| ||| Sbjct 1420304 GCAATGAGACCGGCATCCTTAGTTGCTTGTCTCTGTGAGTCGTTGAAGTAAGCTGGAACA 1420363 Query 322361 GTAATAACTGC 322371 || || || || Sbjct 1420364 GTGATGACAGC 1420374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780821804520472