Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq6 185 1e-41 seq5 107 2e-18 >seq6 Length=1133955 Score = 185 bits (204), Expect = 1e-41 Identities = 1107/1757 (63%), Gaps = 61/1757 (3%) Strand=Plus/Plus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 ||||| || ||||| ||||| ||||| | |||||||||| ||||| ||||||||| Sbjct 477914 GTTCAAAGATTGAGATTGATCAATGAAAGCAGCACGATCAGCAGCCATATCGATGATAGT 477973 Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619 |||||| ||| ||||| || ||||||||||||| || | || | ||||||| Sbjct 477974 CTTTTGAGAAATCTCCCAAACGGTCTTGTACAAATCTTTCAATTCCTTTGGAATGTTTGG 478033 Query 109620 GATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAG 109679 | |||||||||||| || | | | ||| || |||||| | ||| | Sbjct 478034 TAAGTTTTGAATAGAACCGTTATCAGAGATGATGTGACTCTTCATAGAGTCATCCCAAAC 478093 Query 109680 ACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAG 109739 ||| | | | ||| || | || ||| || | |||||||||||||| Sbjct 478094 ACCCAAATCAACCAAATCACGAAGCAAATATGGGTTAACAATCTGGAATTCACCAGCAAG 478153 Query 109740 TGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGAT 109799 || || ||| ||||||| ||||| ||||||||||| || |||| || | ||| Sbjct 478154 GACACGACGAGAGTAAATGTTAGAAGTGTATGGTTCGAAACATTCGTTGTAACCCAAGAT 478213 Query 109800 TTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGT 109859 ||| | ||| || || || ||||| ||||| | || | | ||||| | ||| | Sbjct 478214 TTGAGAAGTCGAGGCAGTTGGCATTGGAGCAACAAGCAAAGAGTTTCTCAAACCGT---A 478270 Query 109860 CTTTACCCGCTCACGCATT----GCGTCCCAATCATAACGACCACTAAAT--TTAGTCTC 109913 ||| || ||| || || | |||||||| |||| |||| || || Sbjct 478271 CTTGACAATATCA-GCCTTAAGAGTATCCCAATC-------CCAC-AAATCGGAAGGCTT 478321 Query 109914 ACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTC 109973 | |||| | || ||||| ||||| || ||| || ||||| | ||| || Sbjct 478322 TCTTCCCCAAAGGTCAAACTGAAGCTGACCCTTAGAAGCTGGGGAACCTTGGAATGATTC 478381 Query 109974 GTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGT 110033 ||| | || || || ||| | ||| || | ||| | || || ||||| || || Sbjct 478382 GTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACTCCAAAGCAGCGTGATAAATGGT 478441 Query 110034 CTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG 110093 ||| || || ||| |||| || || |||| | || || || | || ||| Sbjct 478442 CTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGATTCAAATGGCAAACGCAAAAT 478501 Query 110094 AATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGA 110153 ||||| |||| |||| ||| ||||||||||| |||| || | | |||| || || Sbjct 478502 CATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTGGTCTGTTTCTCATATTGGA 478561 Query 110154 GCGTCGAGCAGTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTT 110210 | || ||| |||| || ||||| |||| ||||| |||| | || | ||||| Sbjct 478562 GTTTCTAGC---TTCTGGGACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTCTT 478618 Query 110211 CGTCACAGTCTTCGTGATTTCATGGA---GTT---TGTCGTAA-TC-GAACGTTTTCGTC 110262 || ||| ||| | |||| ||| | ||| || ||| || || | | | || Sbjct 478619 TGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAGTCTGAGTGGTACCATC 478678 Query 110263 -------TCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGT 110315 | | | ||| | | || | ||||| || || | || || |||| | Sbjct 478679 AAGGGATTTTTCAATGAAAGCT---GGCAATGCAATGGAGGCCAAGTTACAAACAGCAAC 478735 Query 110316 CTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACC 110375 || ||| ||| | |||||| | ||| || ||||||||| ||| ||| || | ||| Sbjct 478736 TTCTTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAGAAGACTTGATCATACC 478795 Query 110376 CAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACC 110435 |||||||||||| || | || ||| || |||||||| || |||||| |||| ||||| Sbjct 478796 CAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAAGCATGAATGGAGTACC 478855 Query 110436 AGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTT 110495 ||| || ||||| | | || || || | ||| | | || |||||| | Sbjct 478856 AGTCTCAGTCTGGGCATCAAGGATTGCATACCACAACTTTTGAGCCTTGACAGTCTTTCT 478915 Query 110496 AGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACA-T 110554 | | ||||||| | ||| ||||| || | ||| ||||| | || || ||| | Sbjct 478916 ACCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTTGAATTCATCACCATA-ACAGT 478974 Query 110555 CAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCC 110614 ||| |||||| || | | ||| |||| | | ||| | ||| ||||| | Sbjct 478975 CAGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCATTCACCATTAGATTCAACAC 479034 Query 110615 TCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACG-GCAACGAGCCTCT 110673 | |||||||| ||||| ||||||| || | ||| | ||||| || || |||| Sbjct 479035 GTTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTGA-TCTCT 479093 Query 110674 TCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCG 110733 || | ||| || || | | || | || || | |||||| | |||||||||||| Sbjct 479094 TCTTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCATGGTTCC 479153 Query 110734 AGATAGACAGC-GATG-----GATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCT 110787 | ||| | || ||| | || ||| || || | |||| || || || || Sbjct 479154 AAATAAAGGGCAAATGCACCAGGTCTCTTGTTACCAC---CTTGGTCGACGTAACGAGCA 479210 Query 110788 GTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTA 110847 ||| || ||||| | | ||| ||||| | || | || ||| || ||||| | Sbjct 479211 GTGTTGTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCAGCA 479270 Query 110848 ATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTA 110907 || || | || | || || ||||| || | ||| |||||||| || ||| Sbjct 479271 ATGTAAGAGCCTGTAGCTCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTCTTG 479330 Query 110908 CTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTG 110967 || ||||| | | | | || |||| ||||| || || |||||| | | | Sbjct 479331 GAGATCAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTCATA 479390 Query 110968 GCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGT 111027 || | || || ||||| |||||||| || | || || || || ||||| | || || Sbjct 479391 GCCACAAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTTGGA 479450 Query 111028 GTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACA 111087 | || || |||| | | ||||| ||| || || || | | || | | Sbjct 479451 GAAGCGTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGTCTCAATAACTGATTTAATA 479510 Query 111088 TCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGG-CGTT--TCGATT 111144 ||| |||| || ||||| || || |||| ||||| || || || || |||| ||| | Sbjct 479511 TCTCTACCATGGATACCGATAGCGACTCTCATGATCAAATGCTGTGGACGTTCAGCGACT 479570 Query 111145 AGCTTTCCATCAACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCA 111204 || |||| ||||||| | |||| |||| | ||||||| ||||||||| | Sbjct 479571 ---TTACCATTAACACGCAACAAGTAAGATCTCTCCAATGTCTTGAAACCAAAGTAGTTA 479627 Query 111205 AAATCGAAATCACGATC 111221 | | |||||| | ||| Sbjct 479628 TAGTTGAAATCTCTATC 479644 >seq5 Length=1593029 Score = 107 bits (118), Expect = 2e-18 Identities = 189/269 (70%), Gaps = 16/269 (6%) Strand=Plus/Plus Query 158479 TATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTATC--AACGTTGGTG 158536 ||||| ||||| || || ||||| |||||||| ||||||||| ||||| ||| |||| Sbjct 980252 TATGGTCGTGTTGCTCCACGTTCCGGTTTGGCCGTGAAGCACGGTATCTCAACA--GGTG 980309 Query 158537 CGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCATGGAG 158596 | || ||| | ||| | || || | || ||||| || || ||||||||||| || | | Sbjct 980310 CCGGTGTCGTTGATGCAGACTACAGAGGTGAAGTGAAGGTTGTTCTCTTCAACCACAGTG 980369 Query 158597 ACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGCTTGTTCT--AGAACGTTG 158654 |||||||||| | |||||||| | ||||| ||||| ||| | |||| ||| Sbjct 980370 ACAAGGACTTCTCAATCGCTAAGGGTGACAGAATCGCTCAGCTCGTTTTGGAGAAGATTG 980429 Query 158655 TGAGACGCCACCCATTGAGGAAATTAACATCG-------TCGAAGATACGGAGAGGGGTT 158707 | | | | | ||| |||| | | ||| || |||| | || ||||| ||| Sbjct 980430 TCA-ATG-CTGAGATTCAGGAGA-TCACAGCGGAGGAGCTCGATAACACTGAGAGAGGTG 980486 Query 158708 CGGGTGGATTTGGTTCTACTGGCAATTAG 158736 | ||||| || ||||||||||| || ||| Sbjct 980487 CAGGTGGTTTCGGTTCTACTGGTAAGTAG 980515 Score = 102 bits (112), Expect = 1e-16 Identities = 286/431 (66%), Gaps = 20/431 (5%) Strand=Plus/Plus Query 167357 AACCCGTACCAATACCTTCAGTACCGTTTACCAAAACCATCGGTAGAGTTGGCATGTAAA 167416 |||| ||||||||||| |||| |||||| ||||| ||||| || | ||| || |||||| Sbjct 649469 AACCGGTACCAATACCCTCAGCACCGTTGACCAATACCATTGGAATAGTAGGAATGTAAG 649528 Query 167417 AGTCGGGTTCAATGGAACGACCATCATCATCCAAGTAGTTGAGAATGGCA---TCATCTT 167473 | | ||||||| |||| ||||| || ||| | | || ||| ||||| | Sbjct 649529 AAACCGGTTCAACCAGCTGACCGTCATCCTCGTTGTAAGTCAAAAGAGCACTGTCATCCT 649588 Query 167474 TG-GGAT--CGA-AGAGCTT--TCGAGCCTCCTTGGTAAGCTTCGTAAAGATGTACCTCG 167527 || |||| || ||| | | ||||| |||| || || || || | | Sbjct 649589 TGTGGATAACGTTAGAAGTGAGTGGAGCCA-------AAGCG--GTGAAAATATAACGGG 649639 Query 167528 TCTGAGACGCATCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAA 167587 ||| |||||||| |||||||| | | ||||| || |||| |||| ||| | Sbjct 649640 GAGCAGAGGCATCCTTACCACCCATCAATCTGGTACCGAAAGCACCATTTGGCAAGAGCA 649699 Query 167588 GATTGATGTTATTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGTTTCAGCGAGGG 167647 || | ||| || || || | | || | ||||| |||| ||| || | | | | | Sbjct 649700 AGTTCAAGTTGTTGGAGCCGACAAAGTCCTGAGCCAAGTTGATGATAGTCTGAACCAAAG 649759 Query 167648 AAACTTCGCCGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCT 167707 | ||| |||||||||||||| |||| || | | || | |||||||| ||||||| Sbjct 649760 ACTGTTCACCGTGGTGGTAAGCTGTCTTCTCTGAAATGTAACCAGCCAACTGGGCAACCT 649819 Query 167708 TCATCTCA-TCTTTGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGT 167766 | || ||| |||| || |||| || ||||| | |||||| ||| | |||| || Sbjct 649820 TGATTTCATTCTTCAAGTTTCTCTT-CAAACAACCAAACATAATCTTTCTTTGACCTGGC 649878 Query 167767 TTGAGACCATC 167777 || | |||||| Sbjct 649879 TTCAAACCATC 649889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975911653600