Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq6 264 1e-65 seq5 123 3e-23 seq2 100 3e-16 >seq6 Length=1133955 Score = 264 bits (292), Expect = 1e-65 Identities = 1116/1740 (64%), Gaps = 63/1740 (4%) Strand=Plus/Plus Query 105595 ATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTT 105654 ||||||||| || ||||| | || | ||||| |||| | |||||||| | | ||| Sbjct 477827 ATAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTT 477886 Query 105655 GGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACC 105714 ||| |||||| | ||| || |||| | |||| || |||||||| | | Sbjct 477887 ACCCATAGTTGGAGCTCTAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAGC 477946 Query 105715 ACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGA----TTTCCCACACTGTGCGGT 105770 ||| | || |||||||| |||| | ||| |||| | ||||| || || || Sbjct 477947 ACGATCAGCAGCCATATCGATGATAGTCTT----TTGAGAAATCTCCCAAACGGTCTTGT 478002 Query 105771 AGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGA 105830 | | || || | || | ||| || | || | |||||||| ||||| | || Sbjct 478003 ACAAATCTTTCAATTCCTTTGGAATGTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGA 478062 Query 105831 CCATGAGATCCTTCATATCCTTGGACCAAAGACC--AATCTTCTTGAGATCATTGACGAG 105888 ||| || ||||||| | ||||| ||| |||| | | |||| | | Sbjct 478063 TGATGTGACTCTTCATAGAGTCATCCCAAACACCCAAATCAACC--AAATCACGAAGCAA 478120 Query 105889 ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCG 105947 || ||| |||||| || || || || ||| | | ||| || ||||| | | Sbjct 478121 ATATGGGTTAACAATCTGGAATTCACCAGCAAGGACACGACG-AGAGTAAATGTTAGAAG 478179 Query 105948 TGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTG 106007 |||| ||||| || ||||| || | |||||||||||| | || ||||| |||||||||| Sbjct 478180 TGTATGGTTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTG 478239 Query 106008 GTGCCATCA--AAAGACTGTTACGAAGACCCT--TTTCCTTGATGCGTTCCTTGAGAACA 106063 | || | | ||||| ||| | | ||| | || | || | |||| ||| | Sbjct 478240 GAGCAACAAGCAAAGA--GTTTCTCAAACCGTACTTGACAATATCAG--CCTTAAGAGTA 478295 Query 106064 TCCCAGTCGTAGT--TGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCAC-CCCT 106120 ||||| || | | | | |||| | |||| | ||||| |||||| |||| Sbjct 478296 TCCCAATCCCACAAATCGGAAGGCTTTCTTC--CCCAAAGGTCAAACTGAAGCTGACCCT 478353 Query 106121 TGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAG 106180 | | | |||| ||||| | |||| || || | ||||| || | || | ||| Sbjct 478354 TAGAAGCTGGG-GAACCTTGGAATGATTCGTATGGACCTTCGGACTTGGCGAGCTCAAGA 478412 Query 106181 CTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCT 106240 | ||||| | |||||||| ||||| || ||||| || |||| ||||| || Sbjct 478413 GAGGACTCCAAAGCAGCGTGATAAATGGTCTCGAAGATCTGAATGTTCAATTCCTTAGCC 478472 Query 106241 TCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCC 106300 | || || ||||||| | || | | ||||| |||| || | |||||||||||| Sbjct 478473 TTTTCAGATTCAAATGGCAAACGCAAAATCATAAAGGCATCAGCTAAACCTTGAACACCG 478532 Query 106301 AAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAAATT 106359 | |||| ||||||| || |||||| || |||| || ||| || || || | || Sbjct 478533 AGGGCAATTGGTCTGTTTCTCATATTGGAGTTTCTAGCT-TCTGGGACTGGGTAGTAGTT 478591 Query 106360 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTC 106419 | |||||||| || ||| | || || || |||| ||| | |||| ||| | ||| Sbjct 478592 ACGGTCAATGATTCTGTTCAAGTTCTTTGTGACAACCTTGGCAATTTGATGCAAACGTTC 478651 Query 106420 ATAATCAAAAGTGCGAGTC---------------TCTTCATTGACATACTTTGGAAGGGC 106464 | | | | |||| |||| | |||| ||| | ||| | || Sbjct 478652 AAAGTTATAAGTCTGAGTGGTACCATCAAGGGATTTTTCAATGAAAGC---TGGCAATGC 478708 Query 106465 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 106524 || || ||||| || |||||||| || || || | ||| || | ||| || Sbjct 478709 AATGGAGGCCAAGTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTCACA 478768 Query 106525 ACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGC 106584 ||||||||| ||| ||| ||| | ||||| ||||| |||||| |||| | ||| || || Sbjct 478769 ACACAAGTTAGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGC 478828 Query 106585 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644 ||||||||| |||||| | || || || ||||| ||||| | | || ||||| | ||| Sbjct 478829 ATCCTTGTAAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATACCA 478888 Query 106645 CA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGA 106703 || | | | | || | ||| | | | || || || ||| ||||| || | Sbjct 478889 CAACTTTTGAGCCTTG-ACAGTCTTTCTACCACGACCTTCTTTCTCATACTTCTCATAAA 478947 Query 106704 GGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAA 106763 | || | || || ||||| ||| | ||||||||||| | | |||| |||| | Sbjct 478948 GAGCCTTGAATTCATCACCATAACAGTCAGCAAGACCTGGTGCTTCATTTGGAGAGAACA 479007 Query 106764 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATG 106823 || ||||| |||| ||||| || | |||||| | || || ||||||| | || Sbjct 479008 AAGTCCATTCACCATTAGATTCAACACGTTCCATGAACAAATCAGGGATCCACAATGCTG 479067 Query 106824 AAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAAC 106882 || | ||| | | | | || |||||| | ||| || || || | || | ||| Sbjct 479068 GGAACAAATCACGAGCTCTGA-TCTCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAA 479126 Query 106883 TCCATGATATCCGCGTGCCATGGCTCAAGATA------GACTGCGATAGATCCCTTTCGA 106936 || | |||||| ||||||||||| || | ||| | ||| || || ||| | Sbjct 479127 TCAAAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGTTA 479186 Query 106937 CGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATA 106996 ||| |||| | || || || || ||| |||||| || |||| ||||||||| | | Sbjct 479187 ---CCACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAA 479243 Query 106997 CCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATG 107056 || | || ||| || || || ||| ||| | ||||| || | ||||||| Sbjct 479244 CCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAGCCTGTAGCTCTAACGTTATGGATG 479303 Query 107057 TGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAG 107116 || | || ||||| ||||| ||| ||||| ||||| | | | ||| ||||| Sbjct 479304 TGTAAACCGATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAG 479363 Query 107117 ATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTT 107176 ||||| | ||| || || || | | || | |||||| ||| ||||||||| || | Sbjct 479364 ATACCCTCGATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGT 479423 Query 107177 GGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTT 107235 || |||||||| ||||| | ||||| | ||||| |||| || || | ||||| Sbjct 479424 GGGGTACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAA-GTATCTCTCAGACATGAG 479482 Query 107236 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 || || ||||| | || || | ||| ||| || ||||| ||||| || || | ||| Sbjct 479483 GTTATAAGTCTCAATAACTGATTTAATATCTCTACCATGGATACCGATAGCGACTCTCAT 479542 >seq5 Length=1593029 Score = 123 bits (136), Expect = 3e-23 Identities = 203/289 (70%), Gaps = 8/289 (3%) Strand=Plus/Plus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| | ||| ||||| ||| |||| | ||||| ||||| | || Sbjct 293550 GGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAAGTCAAACC 293609 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 |||||| | ||| | |||||||||||| |||||| | || || || ||||||||||| Sbjct 293610 TGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACCAGAGAAGAAGAT 293669 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAA 117451 ||| || ||| ||||| |||| ||| | ||| |||| || | ||| | | ||| Sbjct 293670 ACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAG-GCTTCTTCATCGGCAA 293728 Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAA 117511 |||| ||| ||||| | |||||||||| ||||||||| | ||| | ||||| | || Sbjct 293729 TCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTCAATGGCATTAA 293788 Query 117512 ATAACTGCT---TCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAA 117557 | || | || || || | |||||| || || |||||||||| Sbjct 293789 ACAAATACTCAGCCTGTT---GTGGATCCTTGATATAAGTGTCAATCAA 293834 Score = 118 bits (130), Expect = 1e-21 Identities = 105/129 (81%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 155044 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTAT-TCAAGTTGGTGC 155102 |||||||||||||| ||||| |||||| | || |||||||| ||||| |||| ||||| Sbjct 980252 TATGGTCGTGTTGCTCCACGTTCCGGTTTGGCCGTGAAGCACGGTATCTCAA-CAGGTGC 980310 Query 155103 GGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGA 155162 ||||| ||||| | ||||| | ||||||||| || || ||||||||||| ||| | || Sbjct 980311 CGGTGTCGTTGATGCAGACTACAGAGGTGAAGTGAAGGTTGTTCTCTTCAACCACAGTGA 980370 Query 155163 CAAAGACTT 155171 ||| ||||| Sbjct 980371 CAAGGACTT 980379 Score = 84.2 bits (92), Expect = 3e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 106455 TTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTA 106514 ||||||| || | || ||||| || ||||| || ||||| || || ||| | | Sbjct 213945 TTGGAAGAGCAACAGAGGCCAAGTTACAAACGGCAGTCTCTTCAGGTGATGAGTATTGAA 214004 Query 106515 AAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTT 106574 | ||| ||||||||| || ||| || || ||||||||||| || ||||||||| Sbjct 214005 CCACTTCACAACACAAGTTCGAGGACTTGATTGTACCCAAATTCTTCTGATTACTCTTTC 214064 Query 106575 TGTTGCACGCATCCTTGTAGAGCATG 106600 | || || |||||||| ||||||||| Sbjct 214065 TATTACAAGCATCCTTATAGAGCATG 214090 >seq2 Length=2138410 Score = 100 bits (110), Expect = 3e-16 Identities = 275/415 (66%), Gaps = 11/415 (3%) Strand=Plus/Minus Query 9279 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CG 9336 || |||||||||||||| | ||||||||| | ||| || || ||||| || | Sbjct 1435683 TCGAAACCATCCATCTCAACGAGAAGTTGGTTCAACGTTGCCTCACGCTCATCGTTACCA 1435624 Query 9337 CTGG-CATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACA 9395 | || ||||||||| || | | || || | ||||||||| ||||||| |||| Sbjct 1435623 CCGGACATACCACCTTTACCCCTCTCTTTACCAATGGCATCAATTTCATCAACAAAGATG 1435564 Query 9396 ATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACA 9455 ||| ||| || | || ||| || | ||| ||||| || ||| || ||| Sbjct 1435563 ATAGCTGGAGCCATTGTTCTAGCAGTTTTGAACAAATCACGAACTCTGGAGGCACCAACA 1435504 Query 9456 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTC 9514 || ||||||||||| ||||| | || | | ||| || | ||| || ||| || || Sbjct 1435503 CCGACAAACATCTCGACAAACTCTGAACCAG-ACACTGAAAGGAAAGGAACACCAGCCTC 1435445 Query 9515 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9574 ||| || | || || ||||| |||||||| |||||||| ||| | | || ||| Sbjct 1435444 ACCGGCGGTAGCCTTAGCAAGAAGGGTCTTACCTGTACCTGGGGGACCAGACAAGATGGC 1435385 Query 9575 ACCCCGTGGAATCTTGGCGCCA---CTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATC 9631 ||| || |||||||| || ||| || || ||| ||| || | ||| | ||| || Sbjct 1435384 ACCACGAGGAATCTTTGCACCAAGTTTTTCA---TATTTCTGTGGGTTCTTCAAAAACTC 1435328 Query 9632 CACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATCGGTAAAC 9686 |||| || | ||| || || || | ||| || ||||||||| |||| Sbjct 1435327 AACAAATTCCATGATTTCCTCCTTAGCTTCATCACAACCGGCAACATCGGCAAAC 1435273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980711502880