Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq1 197 3e-45
seq4 143 6e-29
seq7 136 9e-27
seq6 96.9 8e-15
>seq1
Length=3147266
Score = 197 bits (218), Expect = 3e-45
Identities = 177/222 (80%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | ||||||||||||||| || || || ||||| |||| || ||
Sbjct 843237 TCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 843178
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||||||||||||||| ||||||||||||| || ||||| || || || ||
Sbjct 843177 TCTGCCATCTTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACC 843118
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| ||||| ||||| || ||||||||| ||||||||||| ||| || || |||||
Sbjct 843117 CTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCAACCTCAAG 843058
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| ||||| || ||||| || || ||||| | ||||||
Sbjct 843057 TGTAATAGTCTTACCGGTCAAGGTCTTCACGAAAATTTGCAT 843016
Score = 174 bits (192), Expect = 3e-38
Identities = 174/223 (78%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| || | ||||||||||||||| || ||||| ||||| |||| |||| |
Sbjct 843693 TCTCAATCTCAACACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAAG-G 843635
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| ||||| || ||||||||||| || |||||||||| || ||||| || ||||| |
Sbjct 843634 TTCTACCATCCTCAAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGGAATAC 843575
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| ||||||||||| || ||| ||||| ||||| ||||| || ||| || || |
Sbjct 843574 CTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCAATAGTGTCAGAGGATTCAACCTCGA 843515
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| |||| ||||| || ||||| || || || || | |||||
Sbjct 843514 GTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 843472
Score = 158 bits (174), Expect = 3e-33
Identities = 168/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | |||||| || ||||| || ||||| ||||| |||| || ||
Sbjct 843465 TCTCAATCTCAAAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAGAGGGT 843406
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| ||||||||||| || |||||||||| || ||||| || || || ||
Sbjct 843405 TCTACCATCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACC 843346
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| ||||| || || || ||| ||||| ||||| || || || || || || ||
Sbjct 843345 CTCCTTGTCCTGGATCTTAGACTTAACGTTGTCAATAGTATCGGAGGACTCAACCTCGAG 843286
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| ||||| || ||||| || || ||||| | ||||||
Sbjct 843285 TGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 843244
Score = 145 bits (160), Expect = 2e-29
Identities = 131/165 (79%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | ||||||||||||||| || ||||| ||||| |||| ||| ||
Sbjct 843009 TCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGGGT 842950
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| ||||| || ||||||||||| || |||||||||| || || || || || || ||
Sbjct 842949 TCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCAGGCGGGATACC 842890
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGA 195083
|| ||||| ||||| || ||||||||| ||||| ||||| ||
Sbjct 842889 CTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGA 842845
>seq4
Length=1873953
Score = 143 bits (158), Expect = 6e-29
Identities = 145/189 (77%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002
||||||||| || || || ||||| || | ||| ||||| || || ||||||||||||||
Sbjct 1428411 AGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACCGTCCTCGAGCTGCTTACC 1428352
Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062
||||||||||||| || ||||| || || || || || ||||| || || || |||
Sbjct 1428351 GGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTGGACTT 1428292
Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122
|||||| ||||||||||| || || || || | ||||| ||||| || ||||| ||
Sbjct 1428291 GACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATGGTCTTACCGGTCAAGGT 1428232
Query 195123 TTTTACGAA 195131
|| |||||
Sbjct 1428231 CTTAACGAA 1428223
>seq7
Length=431226
Score = 136 bits (150), Expect = 9e-27
Identities = 169/230 (73%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||| | || | |||||| |||||||| || ||||| ||||| || | ||| ||
Sbjct 275139 TCTCAATCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGT 275080
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| ||||| || ||||||||||| || |||||||||| || ||||| || || || ||
Sbjct 275079 TCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACC 275020
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||||||||| || || || |||||| || ||||| ||||| ||| || || || |
Sbjct 275019 TTCTTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCCAA 274960
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTT 195148
|| | ||||| || || | || || || || | ||||| | |||||
Sbjct 274959 AGTGATGGTCTTACCCGTGAGGGTCTTAACAAAGATCTGCATCT-TGGTT 274911
>seq6
Length=1133955
Score = 96.9 bits (106), Expect = 8e-15
Identities = 164/235 (70%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 160637 AATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGT 160696
||||| || |||| | |||| ||| |||||||| || || |||| ||| |||||||
Sbjct 479023 AATGGTGAATGGACTTTGTTCTCTCCAAATGAAGCACCAGGTCTTGCTGACTGTTATGGT 478964
Query 160697 TCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTG 160756
|| ||| || |||||||||| | || || ||||| || | | | |||| ||
Sbjct 478963 GATGAATTCAAGGCTCTTTATGAGAAGTATGAGAAAGAAGGTCGTGGTAGAAAGACTGTC 478904
Query 160757 AAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTT 160816
||||| ||| | ||||| || ||||||| ||||| ||| |||| || ||
Sbjct 478903 AAGGCTCAAAAGTTGTGGTATGCAATCCTTGATGCCCAGACTGAGACTGGTACTCCATTC 478844
Query 160817 ATCGCATACAAGGATGCCATCTGTCG-CAAGAGTAACCAGAAGAACTTTGGAATG 160870
|| |||||||||||| | | || |||| ||||||||||||||| || |||
Sbjct 478843 ATGCTTTACAAGGATGCC-TGTAACGAGAAGACTAACCAGAAGAACTTGGGTATG 478790
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481429417204
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |