Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq5 239 5e-58
seq6 221 1e-52
>seq5
Length=1593029
Score = 239 bits (264), Expect = 5e-58
Identities = 416/599 (69%), Gaps = 7/599 (1%)
Strand=Plus/Plus
Query 18951 AAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGA 19010
||||| |||||| ||||| ||| || | || || || | | ||||| ||||||||
Sbjct 293538 AAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGA 293597
Query 19011 AAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCC 19070
|| || ||||| ||||||| ||||| || || |||||||| ||||| ||||| || ||
Sbjct 293598 GAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACC 293657
Query 19071 AGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAG-CAT 19129
||| ||||| |||||||| || || ||||| ||||| ||||| || || ||| || | |
Sbjct 293658 AGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCG-AACAAGGCTT 293716
Query 19130 CATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCT 19189
| | || ||||||| ||| ||||||||||||||||| || | |||||| || ||||
Sbjct 293717 CTTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCT 293776
Query 19190 CTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATA 19249
| || | |||||| | |||| | || | || ||| || | ||| | || ||||| |
Sbjct 293777 CAATGGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCAATCAAGA 293836
Query 19250 AACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTG 19309
| ||| | || || ||||| || || || || || || ||||| ||||| | |
Sbjct 293837 GAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAACACTTAG 293896
Query 19310 CTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCAT 19369
|||||| || || || || | | || | || ||||| || |||||||| || || |
Sbjct 293897 CTTCTGGAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACGATACCGT 293956
Query 19370 CACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCA-TCTGAGGTTAAT 19428
|| ||| ||||| || || | ||| | || || |||| ||| | | |||
Sbjct 293957 CAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCTCA-TTCAAT 294015
Query 19429 ---GTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAA 19485
| |||||||||| | ||| ||||| ||||| | || ||| | ||||| ||||||
Sbjct 294016 CTGTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCCAGAAAGAA 294075
Query 19486 GCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544
|| || || || || || | ||| || ||| | || | || || || | ||||||
Sbjct 294076 GCTTCAGCCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAAAAGAACAAA 294134
Score = 237 bits (262), Expect = 2e-57
Identities = 393/561 (70%), Gaps = 6/561 (1%)
Strand=Plus/Plus
Query 47958 TTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATA 48017
||||| ||||||||||| | |||||| | | ||||| || ||||| || |||||
Sbjct 214031 TTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAGCATG 214090
Query 48018 AAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTT 48077
||||| |||||||| | ||||| || | ||| || | ||| | || ||||||
Sbjct 214091 AAAGGACCACCAGTTTCAACTTGAGACTCCAAGATTGAGTGCCATAACTTCTGAGCCTTA 214150
Query 48078 ATAA-CAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATC 48136
|| | || | | | | || | || ||||| ||| | | ||||| ||||
Sbjct 214151 ATCTTCTTCTTTGCCAATCCT-TCCTTCTCATATTTGTGATACAGTTGAACAAATGCATC 214209
Query 48137 CCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATC 48196
||||||| | || || |||||| |||| |||| | ||| |||| || |||||
Sbjct 214210 ACCATACATCTCATTCAAACCAGGAGCATCATCTGGACTAAACAAGCACCATTCTTCATC 214269
Query 48197 ATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATA-AATAAATCCCTAG 48255
|| | ||| | ||| |||| |||||| ||||| ||||| ||| || ||||| | ||
Sbjct 214270 TTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGC-ATAGAACAAATCACGAG 214328
Query 48256 TTCTTAGTTCTTCATTGCCACTATTCCTT-TTAAGTTCAAGAAAGTCCATTATATCAGCA 48314
||| | ||||| || ||| |||| | ||||||| |||||| ||||| | |||||||
Sbjct 214329 CTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAA-TCCATCACATCAGCA 214387
Query 48315 TGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATA 48374
||||||||||| ||||| || || | | ||||||||| |||||||| |||||||| | |
Sbjct 214388 TGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGATCAACA 214447
Query 48375 TATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTG 48434
||||| ||||| || ||| | ||||| | ||| || || ||||| ||||| |||||||
Sbjct 214448 TATCTTGCAGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGAAGTACCATTT 214507
Query 48435 GTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCT 48494
| ||| | ||| || ||| | | ||| || ||| || | ||| ||||||||
Sbjct 214508 GATCCGGCAATGTATGCACCAGTGGATCTAATGTTAGATATATGTAGACCGATACCACCA 214567
Query 48495 GCCATTTTAGATATTAGAGCA 48515
|| || || |||||||||
Sbjct 214568 GCAGCCTTCGAGATTAGAGCA 214588
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 47018 TAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAA 47077
||| ||||||||||||||||||| ||| |||| |||||||||||||| ||| |
Sbjct 213061 TAAGTAATACATACCAGTCTTTAGTCCTTGCTTCCAGCCATAGAAATGCATCGAAGTGAG 213120
Query 47078 -TTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATG 47136
||| | | || | || || ||||| || || ||||| |||||||||||||
Sbjct 213121 CTTTCGGA-AAGTTGGATCCCTCATATGGATGTTTGTGGATTGGGATTGATCAATAAATG 213179
Query 47137 CACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTAT 47196
||||| || || ||| | |||||| | | |||||| || ||||||||||| ||
Sbjct 213180 GTCCTCTCTCGGCACACATCTGTAAAATCCCACGTTGTGGGATTTCCCATACTGTACGAT 213239
Query 47197 AAATTTGTTTAATGTCTTCTGGGA 47220
||| |||| | || |||||||
Sbjct 213240 GAATCAGTTTCAAGTTCTCTGGGA 213263
>seq6
Length=1133955
Score = 221 bits (244), Expect = 1e-52
Identities = 863/1342 (64%), Gaps = 47/1342 (4%)
Strand=Plus/Plus
Query 47879 TGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTC 47938
||| || || || | ||||| ||||| || || | ||| | || |||| | || ||
Sbjct 478706 TGCAATGGAGGCCAAGTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTC 478765
Query 47939 AGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACA 47998
| ||| | ||| | | ||||| ||||||| || | || ||| | | ||||||
Sbjct 478766 ACAACACAAGTTAGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACA 478825
Query 47999 TGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTT 48058
|| |||||||||||||| || || || ||||| || |||| | |||| ||| | |
Sbjct 478826 GGCATCCTTGTAAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATA 478885
Query 48059 CCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATA 48118
||| | | |||||| | | |||| | | || | || || || |||
Sbjct 478886 CCACAACTTTTGAGCCTTGACAGTCTTTCTACCACGACCTTCTTTCTCATACTTCTCATA 478945
Query 48119 TAACTTCTCAAATTCATCCCCATACACATT-ATCTAACCCAGGACATTCATTAGGACACA 48177
| || |||||||| ||||| ||| | | | | || || |||||| ||| | |
Sbjct 478946 AAGAGCCTTGAATTCATCACCATA-ACAGTCAGCAAGACCTGGTGCTTCATTTGGAGAGA 479004
Query 48178 TCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAG 48237
||| | ||| || ||| | || || | ||| || | ||| || ||||| | |
Sbjct 479005 ACAAAGTCCATTCACCATTAGATTCAACACGTTCCATGAACAAATCAGGGATCCACAATG 479064
Query 48238 CTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAA 48297
|| || ||||| | || ||| | ||||| || || |||| || ||| || | |
Sbjct 479065 CTGGGAACAAATCACGAGCTCTGATCTCTTCTTTACCGTGATTCTTTCTAATGTCGATGA 479124
Query 48298 AGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTAT 48357
| || | ||||| || ||||||||||| ||||| | || | | |||| |||| || |
Sbjct 479125 AATCAAAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGT 479184
Query 48358 TACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATAC 48417
|||| ||||| || | || | ||||| |||||| | || | | |||||| | | ||
Sbjct 479185 TACCACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAAC 479244
Query 48418 CATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-T 48476
| || || |||| || || || | ||| ||| || ||||||| | ||| || |
Sbjct 479245 CGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAGCCTGTAGCTCTAACGTTATGGATGT 479304
Query 48477 GAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAA 48536
| || ||| |||||||| || | || || || | ||||| |||| | || |||||
Sbjct 479305 GTAA-ACCGATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAG 479363
Query 48537 ATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGA 48596
|| || || || ||| ||| ||||| | || |||||| ||||| || || ||
Sbjct 479364 ATACCCTCGATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGT 479423
Query 48597 CAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAAT 48656
|| || | || || || |||||||| || || | || || |||| || | |
Sbjct 479424 GGGGTACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAAGTATCTCTCAGACATGAGG 479483
Query 48657 TTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATT 48716
||||| || |||||||| || | ||||| | ||| ||||| |||| || | |||
Sbjct 479484 TTATAAGTCTCAATAACTGATTTAATATCTCTACCATGGATACCGATAGCGACTCTCATG 479543
Query 48717 AACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCC 48776
| || || || || | |||| | | ||| ||| | ||| | || ||| | |||
Sbjct 479544 ATCAAATGCTGTGGACGTTCAGCGACTTTACCATTAACACGCAACAAGTAAGATCTCTCC 479603
Query 48777 AATGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCGTTATCATTAATAATTGATGA-- 48832
||||| || |||||||| ||||| || ||||| || |||| | || || | ||
Sbjct 479604 AATGTCTTGAAACCAAAGTAGTTATAGTTGAAA--TCTCTATCGTAGATGATGGCAGAGT 479661
Query 48833 --ATTTATTCTTT----CCTT-----ATGT------TT---ATATACTACATC----CAT 48868
| | ||||| ||| |||| || || || ||||| ||
Sbjct 479662 CCAACTCGTCTTTGAACTCTTGAACAATGTCATAAGTTTCCTTAGACAACATCGGAGAAT 479721
Query 48869 -TACAT---TTTTTGATATAATTGATTCCTTGTAAAGATCTTCTACAACATCACTAAATA 48924
| || | |||| |||| | |||||||| ||||| |||||| | ||
Sbjct 479722 GGAGATCGGTCTTTGGGTTAAT---GTAGTTGTAAAGCTCTTCGACAACAGAAGAGAACT 479778
Query 48925 ttttttttGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAGCATAAT 48984
||| | |||| ||||| | |||||| || | |||||||||||||| ||||||| |
Sbjct 479779 GTTTAGTGGTTTGCTTATGCAAATTAGAGATGGCAATTCTAGCAGCTAAAGTAGCATAGT 479838
Query 48985 CTGGATGAATTGTTGTACATGT-ACTAGATATTTCTGCTGCTAATATATCTAATTCTTTA 49043
||||||||| || || ||| | | | | | || || || || |||| || || ||
Sbjct 479839 CTGGATGAACAGTAGT-CATATAAGCACAAGTCTCAGCAGCCAAGTTATCCAACTCGATA 479897
Query 49044 GTAGTTACACCTGTATATATTCCTTGAATAA--CTTTCATTGCTATATTTACTGGATCTA 49101
|| || |||||| ||| | || || | |||| | || || || || | ||| |
Sbjct 479898 GTGGTGACACCTTCATAAACACCAGAGATGATTCTTTGAGTG--ATCTTAACGGCATCAA 479955
Query 49102 TATGATCCATATCCAGTCCATAACATAAtttttttATTCTAGATGTAATTTTATCAAACA 49161
|||| || ||| || |||||||||| | | ||||||| |||||| |||||||||
Sbjct 479956 TATGTTCTGGATCAAGACCATAACATAGTCTAGAGATTCTAGCTGTAATCTTATCAAACT 480015
Query 49162 TTATATTCTCTTTACGACCGTC 49183
| | ||| |||||||||
Sbjct 480016 TGACGGGCTCACGACGACCGTC 480037
Score = 98.7 bits (108), Expect = 1e-15
Identities = 163/233 (70%), Gaps = 3/233 (1%)
Strand=Plus/Plus
Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072
|||| ||||| |||||||||||||| ||||| |||| || ||||| ||||||
Sbjct 477819 GTTCTCAAATAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAG 477878
Query 47073 GTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATA 47132
|| || ||| | | || || ||| ||||| || | ||||||| ||||||||
Sbjct 477879 GTCAACTTACCCATAGTTGGAGCTCTAATGTGAATGTTCAAAGATTGAGATTGATCAATG 477938
Query 47133 AATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTT 47192
|| ||| | | |||||| |||||||| | ||| | |||| | |||||||| || ||
Sbjct 477939 AAAGCAGCACGATCAGCAGCCATATCGATGATAGTCTTTTGAGAAATCTCCCAAACGGTC 477998
Query 47193 TTATAAATTTGTTTAATGTCTTCTGGGA-GATTAGTA--TTTTGAATAGATCC 47242
|| || | | ||| | || | ||| | | || ||| ||||||||||| ||
Sbjct 477999 TTGTACAAATCTTTCAATTCCTTTGGAATGTTTGGTAAGTTTTGAATAGAACC 478051
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108715683680
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