Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq5 179 3e-39 seq4 131 1e-24 seq1 102 7e-16 seq6 100 2e-15 >seq5 Length=1593029 Score = 179 bits (198), Expect = 3e-39 Identities = 556/847 (66%), Gaps = 20/847 (2%) Strand=Plus/Plus Query 551755 TCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTGGCGAAG 551814 |||| |||||| ||||| || || || ||| || |||| | ||||| || | Sbjct 369055 TCGAGGATGGTATCTTTGAGGTTAAGGCCACCGCTGGTGACACTCACTTGGGTGGTGAGG 369114 Query 551815 ATTTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTTTAAACGAAAAAACAAAGT 551872 |||| ||||| | || || | || || |||| || || || |||| |||||| Sbjct 369115 ATTTCGATAACAAGCTCGTTGACCACT-TG-GTTGCTGAGTTCAAGAGAAAGAACAAAAA 369172 Query 551873 TGATCTATCTACATCTGCCAAAGCTCTTCGTC--GTCTAAGAACTGCTTGCGAAAGAGCC 551930 ||| ||| || | ||| || |||| | | | ||||||||| || |||||| Sbjct 369173 GGAT--ATCACCACCAACCAGAGATCTTTGAGAAGATTGAGAACTGCTGCTGAGAGAGCC 369230 Query 551931 AAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGA 551990 || || || | || ||| | |||| || | ||||| | || || || | ||||| Sbjct 369231 AAGAGAACTTTGTCTTCTTCTGCTCAGGCCTCCATTGAGATTGACTCTTTGTACGAGGGT 369290 Query 551991 ATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTT 552050 ||||| | | || |||| | || |||| ||| || || ||||| || |||||| Sbjct 369291 ATTGACTTCTACACTTCTATCACCAGAGCCAGATTCGAGGAGCTTTGTGCTTCCCTCTTT 369350 Query 552051 AGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAA 552110 ||| || | || ||||| || | || || ||||| || |||| || ||| | Sbjct 369351 AGATCCACTTTGGACCCAGTCGAGAAGGTCTTGAGAGACTCTTCCCTTGACAAGTCCCAG 369410 Query 552111 GTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTA 552170 || | || ||||| ||||||||||| ||||| |||||||| || ||| | | | | Sbjct 369411 GTTAACGAGATTGTCCTTGTTGGTGGTTCTACCAGAATTCCAAAGGTTC---AGAAGCTC 369467 Query 552171 AGTTCT---TATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTT 552227 |||| | ||||| ||||| | ||| | | |||| ||||||||||||||| Sbjct 369468 GTTTCTGAGTTCTTCAACGGTAAGGAGCCAAACAGATCTATTAACCCAGATGAGGCTGTT 369527 Query 552228 GCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACA-AACTGATGAAAAACT-AC 552285 || || |||||||| |||| || ||||| | |||| | | | | || ||| | Sbjct 369528 GCTTACGGTGCCGCTGTTCAGGCTGCTATCTTGACTGGTGACCAGTCTTCCAAGACTCAG 369587 Query 552286 AAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTA 552345 | | |||| ||| |||||| |||| | || |||||| | || || | ||| ||| Sbjct 369588 GACCTCTTGTTGTTG--GATGTTGCTCCATTGTCCCTTGGTATTGAGACCGCTGGTGGTG 369645 Query 552346 TTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTT- 552404 | ||||| || || || ||||| ||||||| || || || ||| | | ||| Sbjct 369646 TCATGACCAAGCTCATTCCAAGAAACTCTACTATCCCAACCAAGAAGTCT-GAGACTTTC 369704 Query 552405 TCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAA 552464 || || || | || || || | | ||| ||||| | ||||| || || ||| Sbjct 369705 TCCACTTACGCTGACAACCAGCCAGGTGTCTTGATTCAGGTCTTTGAGGGTGAGAGAGCC 369764 Query 552465 TTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCT 552524 |||||||| || || || |||| || | || ||||| || || ||||| Sbjct 369765 AGAACTAAAGACAACAACTTGCTCGGTAAGTTCGAGTTGTCTGGTATCCCACCAGCTCCA 369824 Query 552525 CGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTG 552584 | || || || || ||||| |||||||||||||| |||||||| || |||||||| || Sbjct 369825 AGAGGTGTTCCACAGATTGAGGTTACTTTCGATATTGATGCCAACGGTATTTTGAACGTT 369884 Query 552585 ACTGCTT 552591 | |||| Sbjct 369885 TCCGCTT 369891 Score = 98.7 bits (108), Expect = 8e-15 Identities = 308/468 (66%), Gaps = 8/468 (2%) Strand=Plus/Plus Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||| || || || || || || |||||||||||||| ||||||| ||| |||||| Sbjct 368496 GTTGAGATCATCGCTAACGACCAGGGTAACAGAACTACCCCATCTTTTGTCGGTTTCACT 368555 Query 550112 GAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || ||||| | ||| | |||||||||| || || | || || || || || | || Sbjct 368556 GACACTGAGAGATTGA-TTGGTGATGCCGCTAAGAACCAGGCTGCTATGAACCCAGCTAA 368614 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || |||| || ||||| ||||| || || |||| || |||| | || ||| Sbjct 368615 CACCGTTTTCGACGCTAAGCGTTTGATCGGTAGAAAGTTCGATGACGCTGAGGTCCAGAA 368674 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290 ||| | ||||| | || ||| | || | || | | || || || | || | | Sbjct 368675 CGATGTTAAGCACTTCCCATTCAAGGTTATCAACGATGCTTCTAAGCCAAAGATCCAGGT 368734 Query 550291 T-ACTCATGAAGGATCTGTTAAACAATTT-TCACCAGAACAAATTTCATCTATGGTTTTA 550348 | | | | |||| | | || | ||| | ||||| | ||||| |||||| || | Sbjct 368735 TGAGT--TCAAGGGTGAGACCAAGACTTTCACTCCAGAGGAGATTTCCTCTATGATTCTT 368792 Query 550349 ATGAAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAAT 550407 | || ||||| | || || || ||| | | ||| | || | || || || || Sbjct 368793 ACCAAGATGAAGGAGACCGCTGAGAACTTCT-TGGGTTCTAAGGTCAACGACGCTGTTAT 368851 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 || || ||||| || || || || || || | || || ||||| |||||||| | ||| Sbjct 368852 CACCGTTCCAGCTTACTTCAACGATTCTCAGAGACAGGCCACTAAGGATGCTGGTCTTAT 368911 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGC 550515 | | || | || ||| | ||||| || || || || ||||| ||||| Sbjct 368912 TTCCGGTTTGAACGTTTTGCGTATCATTAACGAGCCAACTGCCGCTGC 368959 Score = 87.8 bits (96), Expect = 1e-11 Identities = 198/296 (67%), Gaps = 4/296 (1%) Strand=Plus/Plus Query 684101 TTGATCAATAAATGGTGCACGTTCAGCAGCCATTTCTATGATAGATTTTTGAGGTATTTC 684160 |||||||||||||||| | | || ||| ||| | || || ||| || ||||| Sbjct 213166 TTGATCAATAAATGGTCCTCTCTCGGCACACATCTGTAAAATCCCACGTTGTGGGATTTC 213225 Query 684161 CCAAACAGTGCGATAAATATCTTTAATATGCTGGGGAATAGTTGGTATTTTAGAAATTGA 684220 ||| || || |||| ||| ||| | | || || || |||||| | || |||||| Sbjct 213226 CCATACTGTACGATGAATCAGTTTCAAGTTCTCTGGGATCTCTGGTATGTCAGCAATTGA 213285 Query 684221 TCCTCGATAATATTTGATAAGATCAATCATATCCGAATTCCAAAGACCTAAATCAATTAA 684280 ||| | || | ||| |||| |||| |||| | ||||||||| || |||| || Sbjct 213286 TCCATCAGCATCAATAATACGATCTTTCATCTCCGGAGACCAAAGACCCAACTCAAGCAA 213345 Query 684281 ATCCTGAACTAAATATTTATTAATGACATAATAATCTCCAGCTAAAGT--ACTTCTTGAA 684338 || | || ||||| ||||| | | | | | || |||| ||||| || | | Sbjct 213346 GTCATTCACCAAATACTTATTGAGCAGTTGAAATTCACCAG--AAAGTACACGACGAGTG 213403 Query 684339 TAAATATTTTCAGTAAAGGGCTCGATGCACTCATTGTAACCCATGATTTGAGAAGT 684394 ||||| ||| ||| || ||||| | ||| || ||| | |||| ||| ||||| || Sbjct 213404 TAAATGTTTGAAGTTAATGGCTCAAAGCATTCGTTGAAGCCCAAGATCTGAGACGT 213459 >seq4 Length=1873953 Score = 131 bits (144), Expect = 1e-24 Identities = 320/479 (67%), Gaps = 6/479 (1%) Strand=Plus/Minus Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||| || || ||||| || || |||||| | || |||||||| || ||| | || || Sbjct 1420722 GTTGAGATCATCGCCAACGACCAGGGTAACCGTACCACTCCATCGTACGTTGCCTTTACC 1420663 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || ||||| | | | |||||||||| || || ||||||| | || || | || Sbjct 1420662 GACACTGAGCGTCTCATTGGTGATGCTGCTAAGAATCAAGCTGCCATGAACCCAAAGAAC 1420603 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | ||||| ||||| ||||| ||||| | | ||| | || | || | Sbjct 1420602 ACCGTCTTTGACGCTAAGCGTTTGATTGGCCGTAAGTTTGACGACCCAGAAGTCACCACC 1420543 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 ||| ||||| | || ||| | |||| || ||| || || | ||||| | | Sbjct 1420542 GATGCTAAGCACTTCCCATTCAAGGTTGTCAACCAGGGTGGTAAGCCAAAGATTGAGGTT 1420483 Query 550292 -ACTCATGAAGGATCTGTTAAACAATTTT-CACCAGAACAAATTTCATCTATGGTTTTAA 550349 | | | |||| | | ||| | ||| |||| ||| | || || || ||||| | Sbjct 1420482 GAGT--TCAAGGGTGAGACAAAGACTTTCACACCGGAAGAGATCTCTTCAATGGTGCTCG 1420425 Query 550350 TGAAAATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408 | || ||||| | || ||| ||| | | | ||| | || | |||||| || || Sbjct 1420424 TCAAGATGAAGGAGACCGCCGAGT-CATACCTCGGTTCCGCTGTCAAGGATGCTGTCATC 1420366 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| ||||| || || || |||||||| | ||||| ||||| ||||| || | ||| Sbjct 1420365 ACTGTTCCAGCTTACTTCAACGACTCACAGAGACAAGCAACTAAGGATGCCGGTCTCATT 1420306 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 ||||| | || ||||||||||| ||||| || || ||||| ||||| |||| || || Sbjct 1420305 GCTGGTTTGAACGTTCTTCGTATCATCAACGAGCCAACTGCCGCTGCTATTGCCTACGG 1420247 >seq1 Length=3147266 Score = 102 bits (112), Expect = 7e-16 Identities = 151/210 (72%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| |||||||| || || ||| ||||| || | || ||||| |||||||| Sbjct 843450 CAAG-TGAAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCTACCATCTTCAA 843392 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 | || || |||||||| |||||||| ||||| ||||| || || || || || || || | Sbjct 843391 GCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGA 843332 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACAT-TCGAGAGTAACAGTTTTA 563445 | || || || ||||| ||||| | | || | | ||||| |||| ||| ||| Sbjct 843331 TCTTAGACTTAACGTTGTCAATAGTATCGGAG-GACTCAACCTCGAGTGTAATAGTCTTA 843273 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| | || || ||||||||||||||| Sbjct 843272 CCAGTCAAGGTCTTCACGAAAATTTGCATA 843243 Score = 89.7 bits (98), Expect = 4e-12 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 550331 ATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA 550390 || || ||||||||||| | || ||||| | | || ||| ||||||| | Sbjct 1646959 ATCTCTTCTATGGTTTTGACCAAGATGAAGGAGATTGCTGAGGCTAAGATTGGTCAGAAG 1646900 Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||| | | || || || || || ||||| || || || || | || ||||| |||||| Sbjct 1646899 GTTGAGAAGGCTGTTATCACCGTCCCAGCTTACTTCAACGATGCTCAGCGTCAGGCTACT 1646840 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 || |||||||| ||||| || | || |||||| | |||||||| || || ||||| Sbjct 1646839 AAGGATGCTGGTGCCATTGCCGGTTTGAACGTTCTTAGAATTATCAACGAGCCAACTGCC 1646780 Query 550511 GCTGCACTTGCATATGGACTTG 550532 ||||| |||| || || |||| Sbjct 1646779 GCTGCTATTGCTTACGGTCTTG 1646758 Score = 87.8 bits (96), Expect = 1e-11 Identities = 134/185 (72%), Gaps = 7/185 (4%) Strand=Plus/Minus Query 552061 TTGAA-CCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAA 552119 ||||| || || || || ||||| || || || || | || ||| | | |||| Sbjct 2756063 TTGAAGCCTGTGGAGCAGGTTTTGAGTGACTCTGGTATGAAGAAGTCCGACATTGATGAC 2756004 Query 552120 ATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATG-TTAAGTTCTTA 552178 |||| ||||||||||| ||||| |||||||| || || | || || || ||| |||| Sbjct 2756003 GTTGTCCTTGTTGGTGGTTCTACTAGAATTCCAAAGATCCAGGAGTTGCTTGAGT-CTTA 2755945 Query 552179 TTTCAATGGTAAAAAATTAAATGAAAGT--GTTAATCCAGATGAGGCTGTTGCCTATGGT 552236 ||||||||||| || | | |||| | || |||||||||||||||||||||||| Sbjct 2755944 CTTCAATGGTAAGAAGGT--TTCCAAGTCCATCAACCCAGATGAGGCTGTTGCCTATGGT 2755887 Query 552237 GCCGC 552241 || || Sbjct 2755886 GCTGC 2755882 >seq6 Length=1133955 Score = 100 bits (110), Expect = 2e-15 Identities = 250/380 (66%), Gaps = 0/380 (0%) Strand=Plus/Plus Query 684101 TTGATCAATAAATGGTGCACGTTCAGCAGCCATTTCTATGATAGATTTTTGAGGTATTTC 684160 ||||||||| || | ||||| ||||||||||| || ||||||| ||||||| || || Sbjct 477929 TTGATCAATGAAAGCAGCACGATCAGCAGCCATATCGATGATAGTCTTTTGAGAAATCTC 477988 Query 684161 CCAAACAGTGCGATAAATATCTTTAATATGCTGGGGAATAGTTGGTATTTTAGAAATTGA 684220 |||||| || || | |||||| | | || ||||| |||||| || ||| || Sbjct 477989 CCAAACGGTCTTGTACAAATCTTTCAATTCCTTTGGAATGTTTGGTAAGTTTTGAATAGA 478048 Query 684221 TCCTCGATAATATTTGATAAGATCAATCATATCCGAATTCCAAAGACCTAAATCAATTAA 684280 || || | | |||| || ||||| || ||||| ||| ||||||| || Sbjct 478049 ACCGTTATCAGAGATGATGTGACTCTTCATAGAGTCATCCCAAACACCCAAATCAACCAA 478108 Query 684281 ATCCTGAACTAAATATTTATTAATGACATAATAATCTCCAGCTAAAGTACTTCTTGAATA 684340 ||| ||| |||||| |||| | | | || ||||| | || | || || Sbjct 478109 ATCACGAAGCAAATATGGGTTAACAATCTGGAATTCACCAGCAAGGACACGACGAGAGTA 478168 Query 684341 AATATTTTCAGTAAAGGGCTCGATGCACTCATTGTAACCCATGATTTGAGAAGTACTTGC 684400 ||| || ||| | || |||| || || |||||||||| |||||||||||| || Sbjct 478169 AATGTTAGAAGTGTATGGTTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTCGAGGC 478228 Query 684401 TGTGGGCATACAAGTAGTTGTTAAACTATTTCTAACACCATATTTTTGGATATCTATCAT 684460 || ||||| || | ||| ||||| | ||| || || ||||| | | Sbjct 478229 AGTTGGCATTGGAGCAACAAGCAAAGAGTTTCTCAAACCGTACTTGACAATATCAGCCTT 478288 Query 684461 CAAACTATCCCAATCCCACA 684480 | | ||||||||||||||| Sbjct 478289 AAGAGTATCCCAATCCCACA 478308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029295365385880