Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq5 179 3e-39
seq4 131 1e-24
seq1 102 7e-16
seq6 100 2e-15
>seq5
Length=1593029
Score = 179 bits (198), Expect = 3e-39
Identities = 556/847 (66%), Gaps = 20/847 (2%)
Strand=Plus/Plus
Query 551755 TCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTGGCGAAG 551814
|||| |||||| ||||| || || || ||| || |||| | ||||| || |
Sbjct 369055 TCGAGGATGGTATCTTTGAGGTTAAGGCCACCGCTGGTGACACTCACTTGGGTGGTGAGG 369114
Query 551815 ATTTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTTTAAACGAAAAAACAAAGT 551872
|||| ||||| | || || | || || |||| || || || |||| ||||||
Sbjct 369115 ATTTCGATAACAAGCTCGTTGACCACT-TG-GTTGCTGAGTTCAAGAGAAAGAACAAAAA 369172
Query 551873 TGATCTATCTACATCTGCCAAAGCTCTTCGTC--GTCTAAGAACTGCTTGCGAAAGAGCC 551930
||| ||| || | ||| || |||| | | | ||||||||| || ||||||
Sbjct 369173 GGAT--ATCACCACCAACCAGAGATCTTTGAGAAGATTGAGAACTGCTGCTGAGAGAGCC 369230
Query 551931 AAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGA 551990
|| || || | || ||| | |||| || | ||||| | || || || | |||||
Sbjct 369231 AAGAGAACTTTGTCTTCTTCTGCTCAGGCCTCCATTGAGATTGACTCTTTGTACGAGGGT 369290
Query 551991 ATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTT 552050
||||| | | || |||| | || |||| ||| || || ||||| || ||||||
Sbjct 369291 ATTGACTTCTACACTTCTATCACCAGAGCCAGATTCGAGGAGCTTTGTGCTTCCCTCTTT 369350
Query 552051 AGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAA 552110
||| || | || ||||| || | || || ||||| || |||| || ||| |
Sbjct 369351 AGATCCACTTTGGACCCAGTCGAGAAGGTCTTGAGAGACTCTTCCCTTGACAAGTCCCAG 369410
Query 552111 GTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTA 552170
|| | || ||||| ||||||||||| ||||| |||||||| || ||| | | | |
Sbjct 369411 GTTAACGAGATTGTCCTTGTTGGTGGTTCTACCAGAATTCCAAAGGTTC---AGAAGCTC 369467
Query 552171 AGTTCT---TATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTT 552227
|||| | ||||| ||||| | ||| | | |||| |||||||||||||||
Sbjct 369468 GTTTCTGAGTTCTTCAACGGTAAGGAGCCAAACAGATCTATTAACCCAGATGAGGCTGTT 369527
Query 552228 GCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACA-AACTGATGAAAAACT-AC 552285
|| || |||||||| |||| || ||||| | |||| | | | | || ||| |
Sbjct 369528 GCTTACGGTGCCGCTGTTCAGGCTGCTATCTTGACTGGTGACCAGTCTTCCAAGACTCAG 369587
Query 552286 AAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTA 552345
| | |||| ||| |||||| |||| | || |||||| | || || | ||| |||
Sbjct 369588 GACCTCTTGTTGTTG--GATGTTGCTCCATTGTCCCTTGGTATTGAGACCGCTGGTGGTG 369645
Query 552346 TTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTT- 552404
| ||||| || || || ||||| ||||||| || || || ||| | | |||
Sbjct 369646 TCATGACCAAGCTCATTCCAAGAAACTCTACTATCCCAACCAAGAAGTCT-GAGACTTTC 369704
Query 552405 TCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAA 552464
|| || || | || || || | | ||| ||||| | ||||| || || |||
Sbjct 369705 TCCACTTACGCTGACAACCAGCCAGGTGTCTTGATTCAGGTCTTTGAGGGTGAGAGAGCC 369764
Query 552465 TTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCT 552524
|||||||| || || || |||| || | || ||||| || || |||||
Sbjct 369765 AGAACTAAAGACAACAACTTGCTCGGTAAGTTCGAGTTGTCTGGTATCCCACCAGCTCCA 369824
Query 552525 CGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTG 552584
| || || || || ||||| |||||||||||||| |||||||| || |||||||| ||
Sbjct 369825 AGAGGTGTTCCACAGATTGAGGTTACTTTCGATATTGATGCCAACGGTATTTTGAACGTT 369884
Query 552585 ACTGCTT 552591
| ||||
Sbjct 369885 TCCGCTT 369891
Score = 98.7 bits (108), Expect = 8e-15
Identities = 308/468 (66%), Gaps = 8/468 (2%)
Strand=Plus/Plus
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
||||| || || || || || || |||||||||||||| ||||||| ||| ||||||
Sbjct 368496 GTTGAGATCATCGCTAACGACCAGGGTAACAGAACTACCCCATCTTTTGTCGGTTTCACT 368555
Query 550112 GAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170
|| ||||| | ||| | |||||||||| || || | || || || || || | ||
Sbjct 368556 GACACTGAGAGATTGA-TTGGTGATGCCGCTAAGAACCAGGCTGCTATGAACCCAGCTAA 368614
Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230
|| |||| || ||||| ||||| || || |||| || |||| | || |||
Sbjct 368615 CACCGTTTTCGACGCTAAGCGTTTGATCGGTAGAAAGTTCGATGACGCTGAGGTCCAGAA 368674
Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290
||| | ||||| | || ||| | || | || | | || || || | || | |
Sbjct 368675 CGATGTTAAGCACTTCCCATTCAAGGTTATCAACGATGCTTCTAAGCCAAAGATCCAGGT 368734
Query 550291 T-ACTCATGAAGGATCTGTTAAACAATTT-TCACCAGAACAAATTTCATCTATGGTTTTA 550348
| | | | |||| | | || | ||| | ||||| | ||||| |||||| || |
Sbjct 368735 TGAGT--TCAAGGGTGAGACCAAGACTTTCACTCCAGAGGAGATTTCCTCTATGATTCTT 368792
Query 550349 ATGAAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAAT 550407
| || ||||| | || || || ||| | | ||| | || | || || || ||
Sbjct 368793 ACCAAGATGAAGGAGACCGCTGAGAACTTCT-TGGGTTCTAAGGTCAACGACGCTGTTAT 368851
Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467
|| || ||||| || || || || || || | || || ||||| |||||||| | |||
Sbjct 368852 CACCGTTCCAGCTTACTTCAACGATTCTCAGAGACAGGCCACTAAGGATGCTGGTCTTAT 368911
Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGC 550515
| | || | || ||| | ||||| || || || || ||||| |||||
Sbjct 368912 TTCCGGTTTGAACGTTTTGCGTATCATTAACGAGCCAACTGCCGCTGC 368959
Score = 87.8 bits (96), Expect = 1e-11
Identities = 198/296 (67%), Gaps = 4/296 (1%)
Strand=Plus/Plus
Query 684101 TTGATCAATAAATGGTGCACGTTCAGCAGCCATTTCTATGATAGATTTTTGAGGTATTTC 684160
|||||||||||||||| | | || ||| ||| | || || ||| || |||||
Sbjct 213166 TTGATCAATAAATGGTCCTCTCTCGGCACACATCTGTAAAATCCCACGTTGTGGGATTTC 213225
Query 684161 CCAAACAGTGCGATAAATATCTTTAATATGCTGGGGAATAGTTGGTATTTTAGAAATTGA 684220
||| || || |||| ||| ||| | | || || || |||||| | || ||||||
Sbjct 213226 CCATACTGTACGATGAATCAGTTTCAAGTTCTCTGGGATCTCTGGTATGTCAGCAATTGA 213285
Query 684221 TCCTCGATAATATTTGATAAGATCAATCATATCCGAATTCCAAAGACCTAAATCAATTAA 684280
||| | || | ||| |||| |||| |||| | ||||||||| || |||| ||
Sbjct 213286 TCCATCAGCATCAATAATACGATCTTTCATCTCCGGAGACCAAAGACCCAACTCAAGCAA 213345
Query 684281 ATCCTGAACTAAATATTTATTAATGACATAATAATCTCCAGCTAAAGT--ACTTCTTGAA 684338
|| | || ||||| ||||| | | | | | || |||| ||||| || | |
Sbjct 213346 GTCATTCACCAAATACTTATTGAGCAGTTGAAATTCACCAG--AAAGTACACGACGAGTG 213403
Query 684339 TAAATATTTTCAGTAAAGGGCTCGATGCACTCATTGTAACCCATGATTTGAGAAGT 684394
||||| ||| ||| || ||||| | ||| || ||| | |||| ||| ||||| ||
Sbjct 213404 TAAATGTTTGAAGTTAATGGCTCAAAGCATTCGTTGAAGCCCAAGATCTGAGACGT 213459
>seq4
Length=1873953
Score = 131 bits (144), Expect = 1e-24
Identities = 320/479 (67%), Gaps = 6/479 (1%)
Strand=Plus/Minus
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
||||| || || ||||| || || |||||| | || |||||||| || ||| | || ||
Sbjct 1420722 GTTGAGATCATCGCCAACGACCAGGGTAACCGTACCACTCCATCGTACGTTGCCTTTACC 1420663
Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171
|| ||||| | | | |||||||||| || || ||||||| | || || | ||
Sbjct 1420662 GACACTGAGCGTCTCATTGGTGATGCTGCTAAGAATCAAGCTGCCATGAACCCAAAGAAC 1420603
Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231
|| | ||||| ||||| ||||| ||||| | | ||| | || | || |
Sbjct 1420602 ACCGTCTTTGACGCTAAGCGTTTGATTGGCCGTAAGTTTGACGACCCAGAAGTCACCACC 1420543
Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291
||| ||||| | || ||| | |||| || ||| || || | ||||| | |
Sbjct 1420542 GATGCTAAGCACTTCCCATTCAAGGTTGTCAACCAGGGTGGTAAGCCAAAGATTGAGGTT 1420483
Query 550292 -ACTCATGAAGGATCTGTTAAACAATTTT-CACCAGAACAAATTTCATCTATGGTTTTAA 550349
| | | |||| | | ||| | ||| |||| ||| | || || || ||||| |
Sbjct 1420482 GAGT--TCAAGGGTGAGACAAAGACTTTCACACCGGAAGAGATCTCTTCAATGGTGCTCG 1420425
Query 550350 TGAAAATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408
| || ||||| | || ||| ||| | | | ||| | || | |||||| || ||
Sbjct 1420424 TCAAGATGAAGGAGACCGCCGAGT-CATACCTCGGTTCCGCTGTCAAGGATGCTGTCATC 1420366
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
||||| ||||| || || || |||||||| | ||||| ||||| ||||| || | |||
Sbjct 1420365 ACTGTTCCAGCTTACTTCAACGACTCACAGAGACAAGCAACTAAGGATGCCGGTCTCATT 1420306
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527
||||| | || ||||||||||| ||||| || || ||||| ||||| |||| || ||
Sbjct 1420305 GCTGGTTTGAACGTTCTTCGTATCATCAACGAGCCAACTGCCGCTGCTATTGCCTACGG 1420247
>seq1
Length=3147266
Score = 102 bits (112), Expect = 7e-16
Identities = 151/210 (72%), Gaps = 3/210 (1%)
Strand=Plus/Minus
Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326
|||| |||||||| || || ||| ||||| || | || ||||| ||||||||
Sbjct 843450 CAAG-TGAAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCTACCATCTTCAA 843392
Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386
| || || |||||||| |||||||| ||||| ||||| || || || || || || || |
Sbjct 843391 GCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGA 843332
Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACAT-TCGAGAGTAACAGTTTTA 563445
| || || || ||||| ||||| | | || | | ||||| |||| ||| |||
Sbjct 843331 TCTTAGACTTAACGTTGTCAATAGTATCGGAG-GACTCAACCTCGAGTGTAATAGTCTTA 843273
Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
||||| | || || |||||||||||||||
Sbjct 843272 CCAGTCAAGGTCTTCACGAAAATTTGCATA 843243
Score = 89.7 bits (98), Expect = 4e-12
Identities = 141/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 550331 ATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA 550390
|| || ||||||||||| | || ||||| | | || ||| ||||||| |
Sbjct 1646959 ATCTCTTCTATGGTTTTGACCAAGATGAAGGAGATTGCTGAGGCTAAGATTGGTCAGAAG 1646900
Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450
||| | | || || || || || ||||| || || || || | || ||||| ||||||
Sbjct 1646899 GTTGAGAAGGCTGTTATCACCGTCCCAGCTTACTTCAACGATGCTCAGCGTCAGGCTACT 1646840
Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510
|| |||||||| ||||| || | || |||||| | |||||||| || || |||||
Sbjct 1646839 AAGGATGCTGGTGCCATTGCCGGTTTGAACGTTCTTAGAATTATCAACGAGCCAACTGCC 1646780
Query 550511 GCTGCACTTGCATATGGACTTG 550532
||||| |||| || || ||||
Sbjct 1646779 GCTGCTATTGCTTACGGTCTTG 1646758
Score = 87.8 bits (96), Expect = 1e-11
Identities = 134/185 (72%), Gaps = 7/185 (4%)
Strand=Plus/Minus
Query 552061 TTGAA-CCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAA 552119
||||| || || || || ||||| || || || || | || ||| | | ||||
Sbjct 2756063 TTGAAGCCTGTGGAGCAGGTTTTGAGTGACTCTGGTATGAAGAAGTCCGACATTGATGAC 2756004
Query 552120 ATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATG-TTAAGTTCTTA 552178
|||| ||||||||||| ||||| |||||||| || || | || || || ||| ||||
Sbjct 2756003 GTTGTCCTTGTTGGTGGTTCTACTAGAATTCCAAAGATCCAGGAGTTGCTTGAGT-CTTA 2755945
Query 552179 TTTCAATGGTAAAAAATTAAATGAAAGT--GTTAATCCAGATGAGGCTGTTGCCTATGGT 552236
||||||||||| || | | |||| | || ||||||||||||||||||||||||
Sbjct 2755944 CTTCAATGGTAAGAAGGT--TTCCAAGTCCATCAACCCAGATGAGGCTGTTGCCTATGGT 2755887
Query 552237 GCCGC 552241
|| ||
Sbjct 2755886 GCTGC 2755882
>seq6
Length=1133955
Score = 100 bits (110), Expect = 2e-15
Identities = 250/380 (66%), Gaps = 0/380 (0%)
Strand=Plus/Plus
Query 684101 TTGATCAATAAATGGTGCACGTTCAGCAGCCATTTCTATGATAGATTTTTGAGGTATTTC 684160
||||||||| || | ||||| ||||||||||| || ||||||| ||||||| || ||
Sbjct 477929 TTGATCAATGAAAGCAGCACGATCAGCAGCCATATCGATGATAGTCTTTTGAGAAATCTC 477988
Query 684161 CCAAACAGTGCGATAAATATCTTTAATATGCTGGGGAATAGTTGGTATTTTAGAAATTGA 684220
|||||| || || | |||||| | | || ||||| |||||| || ||| ||
Sbjct 477989 CCAAACGGTCTTGTACAAATCTTTCAATTCCTTTGGAATGTTTGGTAAGTTTTGAATAGA 478048
Query 684221 TCCTCGATAATATTTGATAAGATCAATCATATCCGAATTCCAAAGACCTAAATCAATTAA 684280
|| || | | |||| || ||||| || ||||| ||| ||||||| ||
Sbjct 478049 ACCGTTATCAGAGATGATGTGACTCTTCATAGAGTCATCCCAAACACCCAAATCAACCAA 478108
Query 684281 ATCCTGAACTAAATATTTATTAATGACATAATAATCTCCAGCTAAAGTACTTCTTGAATA 684340
||| ||| |||||| |||| | | | || ||||| | || | || ||
Sbjct 478109 ATCACGAAGCAAATATGGGTTAACAATCTGGAATTCACCAGCAAGGACACGACGAGAGTA 478168
Query 684341 AATATTTTCAGTAAAGGGCTCGATGCACTCATTGTAACCCATGATTTGAGAAGTACTTGC 684400
||| || ||| | || |||| || || |||||||||| |||||||||||| ||
Sbjct 478169 AATGTTAGAAGTGTATGGTTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTCGAGGC 478228
Query 684401 TGTGGGCATACAAGTAGTTGTTAAACTATTTCTAACACCATATTTTTGGATATCTATCAT 684460
|| ||||| || | ||| ||||| | ||| || || ||||| | |
Sbjct 478229 AGTTGGCATTGGAGCAACAAGCAAAGAGTTTCTCAAACCGTACTTGACAATATCAGCCTT 478288
Query 684461 CAAACTATCCCAATCCCACA 684480
| | |||||||||||||||
Sbjct 478289 AAGAGTATCCCAATCCCACA 478308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029295365385880
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