Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq5 219 5e-52 >seq5 Length=1593029 Score = 219 bits (242), Expect = 5e-52 Identities = 377/540 (70%), Gaps = 13/540 (2%) Strand=Plus/Plus Query 37166 AAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGA 37225 |||||| ||||| ||||| ||| || ||||||||||| | | ||||| |||||||| Sbjct 293538 AAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGA 293597 Query 37226 AAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCC 37285 || || || |||||||| |||||||| || || | ||| || || | ||||| || || Sbjct 293598 GAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACC 293657 Query 37286 AGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGA--AAG--TTG 37341 ||| ||||| ||||||||||| || ||||| || ||||| | ||||| ||| || Sbjct 293658 AGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAGGCTT- 293716 Query 37342 AACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTG 37401 || | ||| | ||||||| | | |||||| ||||| |||| |||| ||| | Sbjct 293717 --CT-TCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAG 293773 Query 37402 TTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTA 37461 | ||||| || || || | | | | | || ||| | |||||||| ||||| | Sbjct 293774 TCTCAATGGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCAATCA 293833 Query 37462 GTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACC 37521 | | || | ||||||||||| || || || || || ||||| || |||||| Sbjct 293834 AGAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAACACT 293893 Query 37522 TAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCC 37581 ||||||| | | ||| || ||| | | || ||| | | ||||| |||||||| || | Sbjct 293894 TAGCTTCTGGAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACGATAC 293953 Query 37582 CATCACTAGCTGCAAAGAAAGCAAGAAC---ATATTTTATAAAATG-TCTTTCATCATTT 37637 | ||| ||| |||||||| |||||||| | | | | ||| | || ||| ||||| Sbjct 293954 CGTCAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTC-TCATTC 294012 Query 37638 GATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 || || |||||||||| | ||| || || ||||||| || ||| ||||||| ||| Sbjct 294013 AATCTGTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCCAGAAA 294072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316711152480